RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 GPR75-ASB3A0A0A6YYF3 556 aa18.27■□□□□ 0.51
PRPF3-201ENST00000324862 CACNB3P54284 484 aa18.27■□□□□ 0.51
PRPF3-201ENST00000324862 APOBEC3HQ6NTF7 200 aaKnown RBP18.27■□□□□ 0.51
PRPF3-201ENST00000324862 IFNL3Q8IZI9 196 aa18.27■□□□□ 0.51
PRPF3-201ENST00000324862 STK11IPQ8N1F8 1099 aa18.27■□□□□ 0.51
PRPF3-201ENST00000324862 SNX14Q9Y5W7 946 aa18.27■□□□□ 0.51
PRPF3-201ENST00000324862 MAST2Q6P0Q8 1798 aa18.26■□□□□ 0.51
PRPF3-201ENST00000324862 CYP2D7A0A087X1C5 515 aa18.26■□□□□ 0.51
PRPF3-201ENST00000324862 PATL2C9JE40 543 aaKnown RBP18.26■□□□□ 0.51
PRPF3-201ENST00000324862 RHBDL3P58872 404 aa18.26■□□□□ 0.51
PRPF3-201ENST00000324862 FKBP1AP62942 108 aaKnown RBP18.26■□□□□ 0.51
PRPF3-201ENST00000324862 C9orf131Q5VYM1 1079 aa18.26■□□□□ 0.51
PRPF3-201ENST00000324862 TEKT1Q969V4 418 aa18.26■□□□□ 0.51
PRPF3-201ENST00000324862 EGFRP00533 1210 aa18.25■□□□□ 0.51
PRPF3-201ENST00000324862 CPA1P15085 419 aa18.25■□□□□ 0.51
PRPF3-201ENST00000324862 FAM163AQ96GL9 167 aaPredicted RBP18.25■□□□□ 0.51
PRPF3-201ENST00000324862 MYH2Q9UKX2 1941 aa18.25■□□□□ 0.51
PRPF3-201ENST00000324862 LDHCP07864 332 aa18.25■□□□□ 0.51
PRPF3-201ENST00000324862 EIF6P56537 245 aaKnown RBP18.25■□□□□ 0.51
PRPF3-201ENST00000324862 TGFBRAP1Q8WUH2 860 aa18.25■□□□□ 0.51
PRPF3-201ENST00000324862 INCENPQ9NQS7 918 aa18.25■□□□□ 0.51
PRPF3-201ENST00000324862 PRMT6Q96LA8 375 aaPredicted RBP18.24■□□□□ 0.51
PRPF3-201ENST00000324862 U3KPZ7 1027 aaPredicted RBP18.24■□□□□ 0.51
PRPF3-201ENST00000324862 BAG3O95817 575 aa18.24■□□□□ 0.51
PRPF3-201ENST00000324862 GMPSP49915 693 aaPredicted RBP18.24■□□□□ 0.51
PRPF3-201ENST00000324862 PPP4CP60510 307 aa18.24■□□□□ 0.51
PRPF3-201ENST00000324862 CFAP100Q494V2 611 aa18.24■□□□□ 0.51
PRPF3-201ENST00000324862 STOX1Q6ZVD7 989 aa18.24■□□□□ 0.51
PRPF3-201ENST00000324862 MAPKAPK5Q8IW41 473 aa18.24■□□□□ 0.51
PRPF3-201ENST00000324862 NKX2-3Q8TAU0 364 aa18.24■□□□□ 0.51
PRPF3-201ENST00000324862 UPF3BQ9BZI7 483 aaKnown RBP18.24■□□□□ 0.51
PRPF3-201ENST00000324862 TDO2P48775 406 aa18.23■□□□□ 0.51
PRPF3-201ENST00000324862 CDC42EP5Q6NZY7 148 aa18.23■□□□□ 0.51
PRPF3-201ENST00000324862 NBPF3Q9H094 633 aa18.23■□□□□ 0.51
PRPF3-201ENST00000324862 NAPBQ9H115 298 aa18.23■□□□□ 0.51
PRPF3-201ENST00000324862 DCP1AQ9NPI6 582 aaPredicted RBP18.23■□□□□ 0.51
PRPF3-201ENST00000324862 USP17L8P0C7I0 530 aa18.23■□□□□ 0.51
PRPF3-201ENST00000324862 MCCP23508 829 aa18.23■□□□□ 0.51
PRPF3-201ENST00000324862 NFIAQ12857 509 aa18.23■□□□□ 0.51
PRPF3-201ENST00000324862 PICALMQ13492 652 aa18.23■□□□□ 0.51
PRPF3-201ENST00000324862 HHIPL2Q6UWX4 724 aa18.23■□□□□ 0.51
PRPF3-201ENST00000324862 SCAF8Q9UPN6 1271 aaKnown RBP18.23■□□□□ 0.51
PRPF3-201ENST00000324862 DDNO94850 711 aaPredicted RBP18.22■□□□□ 0.51
PRPF3-201ENST00000324862 CYP2D6P10635 497 aa18.22■□□□□ 0.51
PRPF3-201ENST00000324862 TNIP1Q15025 636 aa18.22■□□□□ 0.51
PRPF3-201ENST00000324862 RBM26Q5T8P6 1007 aaKnown RBP18.22■□□□□ 0.51
PRPF3-201ENST00000324862 SLF2Q8IX21 1173 aa18.22■□□□□ 0.51
PRPF3-201ENST00000324862 TEX11Q8IYF3 940 aa18.22■□□□□ 0.51
PRPF3-201ENST00000324862 ZDHHC15Q96MV8 337 aa18.22■□□□□ 0.51
PRPF3-201ENST00000324862 NOL10Q9BSC4 688 aaKnown RBP18.22■□□□□ 0.51
PRPF3-201ENST00000324862 CRNKL1Q9BZJ0 848 aaKnown RBP18.22■□□□□ 0.51
PRPF3-201ENST00000324862 TDRD3Q9H7E2 651 aaKnown RBP18.22■□□□□ 0.51
PRPF3-201ENST00000324862 DDX4Q9NQI0 724 aaKnown RBP18.22■□□□□ 0.51
PRPF3-201ENST00000324862 USP40Q9NVE5 1235 aa18.22■□□□□ 0.51
PRPF3-201ENST00000324862 TACC3Q9Y6A5 838 aa18.22■□□□□ 0.51
PRPF3-201ENST00000324862 SBF1O95248 1867 aa18.22■□□□□ 0.51
PRPF3-201ENST00000324862 PSME4Q14997 1843 aa18.22■□□□□ 0.51
PRPF3-201ENST00000324862 MYO3BQ8WXR4 1341 aa18.22■□□□□ 0.51
PRPF3-201ENST00000324862 EIF5BO60841 1220 aaKnown RBP18.22■□□□□ 0.51
PRPF3-201ENST00000324862 CD2BP2O95400 341 aaKnown RBP18.22■□□□□ 0.51
PRPF3-201ENST00000324862 USP5P45974 858 aa18.22■□□□□ 0.51
PRPF3-201ENST00000324862 CTDSPL2Q05D32 466 aa18.22■□□□□ 0.51
PRPF3-201ENST00000324862 AGBL3Q8NEM8 1001 aa18.22■□□□□ 0.51
PRPF3-201ENST00000324862 SAP30BPQ9UHR5 308 aaKnown RBP18.22■□□□□ 0.51
PRPF3-201ENST00000324862 SERPINA10Q9UK55 444 aa18.22■□□□□ 0.51
PRPF3-201ENST00000324862 MINDY4BA8MYZ0 360 aa18.21■□□□□ 0.51
PRPF3-201ENST00000324862 GNAT2P19087 354 aa18.21■□□□□ 0.51
PRPF3-201ENST00000324862 TBC1D10CQ8IV04 446 aa18.21■□□□□ 0.51
PRPF3-201ENST00000324862 OGFOD1Q8N543 542 aa18.21■□□□□ 0.51
PRPF3-201ENST00000324862 TCEANC2Q96MN5 208 aa18.21■□□□□ 0.51
PRPF3-201ENST00000324862 USP17L12C9JPN9 530 aa18.21■□□□□ 0.51
PRPF3-201ENST00000324862 USP17L21D6R901 530 aa18.21■□□□□ 0.51
PRPF3-201ENST00000324862 EPB41L2O43491 1005 aaKnown RBP18.21■□□□□ 0.51
PRPF3-201ENST00000324862 WDHD1O75717 1129 aaPredicted RBP18.21■□□□□ 0.51
PRPF3-201ENST00000324862 SAMD7Q7Z3H4 446 aa18.21■□□□□ 0.51
PRPF3-201ENST00000324862 KCNB2Q92953 911 aa18.21■□□□□ 0.51
PRPF3-201ENST00000324862 MKRN1Q9UHC7 482 aaKnown RBP18.21■□□□□ 0.51
PRPF3-201ENST00000324862 CLRN2A0PK11 232 aa18.2■□□□□ 0.5
PRPF3-201ENST00000324862 CTR9Q6PD62 1173 aa18.2■□□□□ 0.5
PRPF3-201ENST00000324862 MICALL2Q8IY33 904 aa18.2■□□□□ 0.5
PRPF3-201ENST00000324862 JAKMIP1Q96N16 626 aaKnown RBP18.2■□□□□ 0.5
PRPF3-201ENST00000324862 ZNF213O14771 459 aa18.2■□□□□ 0.5
PRPF3-201ENST00000324862 SLURP2P0DP57 97 aa18.2■□□□□ 0.5
PRPF3-201ENST00000324862 NBPF9Q3BBW0 867 aa18.2■□□□□ 0.5
PRPF3-201ENST00000324862 ZFPM1Q8IX07 1006 aa18.2■□□□□ 0.5
PRPF3-201ENST00000324862 MCM9Q9NXL9 1143 aa18.2■□□□□ 0.5
PRPF3-201ENST00000324862 FLT1P17948 1338 aa18.19■□□□□ 0.5
PRPF3-201ENST00000324862 ZKSCAN1P17029 563 aaPredicted RBP18.19■□□□□ 0.5
PRPF3-201ENST00000324862 IMMTQ16891 758 aaKnown RBP18.19■□□□□ 0.5
PRPF3-201ENST00000324862 NACAP1Q9BZK3 213 aa18.19■□□□□ 0.5
PRPF3-201ENST00000324862 CNOT7Q9UIV1 285 aaKnown RBP18.19■□□□□ 0.5
PRPF3-201ENST00000324862 ASTN2O75129 1339 aaPredicted RBP18.19■□□□□ 0.5
PRPF3-201ENST00000324862 SPDYE2BA6NHP3 402 aa18.19■□□□□ 0.5
PRPF3-201ENST00000324862 IGSF3O75054 1194 aa18.19■□□□□ 0.5
PRPF3-201ENST00000324862 SPDYE6P0CI01 402 aa18.19■□□□□ 0.5
PRPF3-201ENST00000324862 CASTP20810 708 aaKnown RBP18.19■□□□□ 0.5
PRPF3-201ENST00000324862 HDLBPQ00341 1268 aaKnown RBP18.19■□□□□ 0.5
PRPF3-201ENST00000324862 TCP10Q12799 353 aa18.19■□□□□ 0.5
PRPF3-201ENST00000324862 TBC1D10BQ4KMP7 808 aaPredicted RBP18.19■□□□□ 0.5
PRPF3-201ENST00000324862 TMED8Q6PL24 325 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms