RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 BRINP3Q76B58 766 aa17.15■□□□□ 0.34
SCAP-202ENST00000320017 DDX46Q7L014 1031 aaKnown RBP17.15■□□□□ 0.34
SCAP-202ENST00000320017 FAM169AQ9Y6X4 670 aa17.15■□□□□ 0.34
SCAP-202ENST00000320017 TFRCP02786 760 aaKnown RBP17.15■□□□□ 0.34
SCAP-202ENST00000320017 DPF2Q92785 391 aa17.15■□□□□ 0.34
SCAP-202ENST00000320017 CLIC6Q96NY7 704 aa17.15■□□□□ 0.34
SCAP-202ENST00000320017 NF2P35240 595 aa17.15■□□□□ 0.34
SCAP-202ENST00000320017 RESTQ13127 1097 aa17.15■□□□□ 0.34
SCAP-202ENST00000320017 CPLX2Q6PUV4 134 aaKnown RBP17.15■□□□□ 0.34
SCAP-202ENST00000320017 RNF217Q8TC41 542 aa17.15■□□□□ 0.34
SCAP-202ENST00000320017 MYD88Q99836 296 aa17.15■□□□□ 0.34
SCAP-202ENST00000320017 EXOC5O00471 708 aa17.14■□□□□ 0.33
SCAP-202ENST00000320017 POLA2Q14181 598 aa17.14■□□□□ 0.33
SCAP-202ENST00000320017 RIN2Q8WYP3 895 aaPredicted RBP17.14■□□□□ 0.33
SCAP-202ENST00000320017 N4BP2L2Q92802 583 aaPredicted RBP17.14■□□□□ 0.33
SCAP-202ENST00000320017 BAG1Q99933 345 aaPredicted RBP17.14■□□□□ 0.33
SCAP-202ENST00000320017 TMEM232C9JQI7 657 aa17.14■□□□□ 0.33
SCAP-202ENST00000320017 SLC27A2O14975 620 aa17.14■□□□□ 0.33
SCAP-202ENST00000320017 SLC3A2P08195 630 aaKnown RBP17.14■□□□□ 0.33
SCAP-202ENST00000320017 PIP4K2BP78356 416 aa17.14■□□□□ 0.33
SCAP-202ENST00000320017 TTC19Q6DKK2 380 aaPredicted RBP17.14■□□□□ 0.33
SCAP-202ENST00000320017 SAMM50Q9Y512 469 aa17.14■□□□□ 0.33
SCAP-202ENST00000320017 SASH1O94885 1247 aa17.14■□□□□ 0.33
SCAP-202ENST00000320017 ADKP55263 362 aaKnown RBP17.14■□□□□ 0.33
SCAP-202ENST00000320017 CABP4P57796 275 aa17.14■□□□□ 0.33
SCAP-202ENST00000320017 VSNL1P62760 191 aa17.14■□□□□ 0.33
SCAP-202ENST00000320017 MTX1Q13505 466 aa17.14■□□□□ 0.33
SCAP-202ENST00000320017 TOGARAM2Q6ZUX3 1019 aa17.14■□□□□ 0.33
SCAP-202ENST00000320017 ANKRD1Q15327 319 aa17.13■□□□□ 0.33
SCAP-202ENST00000320017 HSP90AB4PQ58FF6 505 aa17.13■□□□□ 0.33
SCAP-202ENST00000320017 ARHGAP6O43182 974 aa17.13■□□□□ 0.33
SCAP-202ENST00000320017 SRGAP1Q7Z6B7 1085 aa17.13■□□□□ 0.33
SCAP-202ENST00000320017 MRPS27Q92552 414 aaKnown RBP17.13■□□□□ 0.33
SCAP-202ENST00000320017 NUTM2BA6NNL0 878 aaPredicted RBP17.12■□□□□ 0.33
SCAP-202ENST00000320017 NUTM2EB1AL46 878 aaPredicted RBP17.12■□□□□ 0.33
SCAP-202ENST00000320017 EPB41L2O43491 1005 aaKnown RBP17.12■□□□□ 0.33
SCAP-202ENST00000320017 RPS6KA5O75582 802 aa17.12■□□□□ 0.33
SCAP-202ENST00000320017 ADAMTS2O95450 1211 aa17.12■□□□□ 0.33
SCAP-202ENST00000320017 NUTM2AQ8IVF1 878 aaPredicted RBP17.12■□□□□ 0.33
SCAP-202ENST00000320017 STK11IPQ8N1F8 1099 aa17.12■□□□□ 0.33
SCAP-202ENST00000320017 IL17RAQ96F46 866 aa17.12■□□□□ 0.33
SCAP-202ENST00000320017 DBF4Q9UBU7 674 aaPredicted RBP17.12■□□□□ 0.33
SCAP-202ENST00000320017 CPP00450 1065 aa17.12■□□□□ 0.33
SCAP-202ENST00000320017 STK38Q15208 465 aa17.12■□□□□ 0.33
SCAP-202ENST00000320017 KIAA0754O94854 1291 aa17.12■□□□□ 0.33
SCAP-202ENST00000320017 KCNV1Q6PIU1 500 aa17.12■□□□□ 0.33
SCAP-202ENST00000320017 SHTN1A0MZ66 631 aa17.11■□□□□ 0.33
SCAP-202ENST00000320017 CALRP27797 417 aaKnown RBP17.11■□□□□ 0.33
SCAP-202ENST00000320017 KCNJ6P48051 423 aa17.11■□□□□ 0.33
SCAP-202ENST00000320017 NAIF1Q69YI7 327 aaPredicted RBP17.11■□□□□ 0.33
SCAP-202ENST00000320017 CEP57Q86XR8 500 aa17.11■□□□□ 0.33
SCAP-202ENST00000320017 GBP3Q9H0R5 595 aa17.11■□□□□ 0.33
SCAP-202ENST00000320017 ANKZF1Q9H8Y5 726 aa17.11■□□□□ 0.33
SCAP-202ENST00000320017 CD248Q9HCU0 757 aa17.11■□□□□ 0.33
SCAP-202ENST00000320017 PIK3C2AO00443 1686 aa17.11■□□□□ 0.33
SCAP-202ENST00000320017 CBFA2T2O43439 604 aa17.11■□□□□ 0.33
SCAP-202ENST00000320017 PDE6BP35913 854 aa17.11■□□□□ 0.33
SCAP-202ENST00000320017 SARNPP82979 210 aaKnown RBP17.11■□□□□ 0.33
SCAP-202ENST00000320017 EPHA10Q5JZY3 1008 aa17.11■□□□□ 0.33
SCAP-202ENST00000320017 EVI5LQ96CN4 794 aa17.11■□□□□ 0.33
SCAP-202ENST00000320017 SGSM3Q96HU1 749 aa17.11■□□□□ 0.33
SCAP-202ENST00000320017 ZNF396Q96N95 335 aaPredicted RBP17.11■□□□□ 0.33
SCAP-202ENST00000320017 TM6SF1Q9BZW5 370 aa17.11■□□□□ 0.33
SCAP-202ENST00000320017 NCOA5Q9HCD5 579 aaKnown RBP17.11■□□□□ 0.33
SCAP-202ENST00000320017 AKAP12Q02952 1782 aa17.11■□□□□ 0.33
SCAP-202ENST00000320017 POTEB2H3BUK9 544 aa17.11■□□□□ 0.33
SCAP-202ENST00000320017 BCAS4Q8TDM0 211 aa17.11■□□□□ 0.33
SCAP-202ENST00000320017 GNL3LQ9NVN8 582 aaKnown RBP17.11■□□□□ 0.33
SCAP-202ENST00000320017 KIAA1468Q9P260 1216 aa17.11■□□□□ 0.33
SCAP-202ENST00000320017 L1RE1Q9UN81 338 aa17.11■□□□□ 0.33
SCAP-202ENST00000320017 GOLGA6L9A6NEM1 432 aa17.1■□□□□ 0.33
SCAP-202ENST00000320017 MYO1FO00160 1098 aa17.1■□□□□ 0.33
SCAP-202ENST00000320017 CUTAO60888 179 aa17.1■□□□□ 0.33
SCAP-202ENST00000320017 ZNF569Q5MCW4 686 aa17.1■□□□□ 0.33
SCAP-202ENST00000320017 FAM43BQ6ZT52 329 aaPredicted RBP17.1■□□□□ 0.33
SCAP-202ENST00000320017 EHD4Q9H223 541 aa17.1■□□□□ 0.33
SCAP-202ENST00000320017 GRM8O00222 908 aa17.1■□□□□ 0.33
SCAP-202ENST00000320017 NDUFA8P51970 172 aa17.1■□□□□ 0.33
SCAP-202ENST00000320017 SCRN1Q12765 414 aa17.1■□□□□ 0.33
SCAP-202ENST00000320017 COPS6Q7L5N1 327 aa17.1■□□□□ 0.33
SCAP-202ENST00000320017 UBE3BQ7Z3V4 1068 aa17.1■□□□□ 0.33
SCAP-202ENST00000320017 CPLX3Q8WVH0 158 aa17.1■□□□□ 0.33
SCAP-202ENST00000320017 A0A0G2JLW4 131 aa17.09■□□□□ 0.33
SCAP-202ENST00000320017 LRRIQ3A6PVS8 624 aaPredicted RBP17.09■□□□□ 0.33
SCAP-202ENST00000320017 PAX7P23759 505 aa17.09■□□□□ 0.33
SCAP-202ENST00000320017 OTUD7BQ6GQQ9 843 aa17.09■□□□□ 0.33
SCAP-202ENST00000320017 CEP112Q8N8E3 955 aa17.09■□□□□ 0.33
SCAP-202ENST00000320017 KIF5CO60282 957 aa17.09■□□□□ 0.33
SCAP-202ENST00000320017 NECTIN1Q15223 517 aa17.09■□□□□ 0.33
SCAP-202ENST00000320017 XAGE3Q8WTP9 111 aa17.09■□□□□ 0.33
SCAP-202ENST00000320017 CRACR2AQ9BSW2 395 aa17.09■□□□□ 0.33
SCAP-202ENST00000320017 VEZTQ9HBM0 779 aa17.09■□□□□ 0.33
SCAP-202ENST00000320017 CCDC189A1A4V9 331 aa17.09■□□□□ 0.33
SCAP-202ENST00000320017 CTAGE15A4D2H0 777 aa17.09■□□□□ 0.33
SCAP-202ENST00000320017 ADCY9O60503 1353 aa17.09■□□□□ 0.33
SCAP-202ENST00000320017 CTAGE8P0CG41 777 aa17.09■□□□□ 0.33
SCAP-202ENST00000320017 ELF1P32519 619 aa17.09■□□□□ 0.33
SCAP-202ENST00000320017 NEDD9Q14511 834 aa17.09■□□□□ 0.33
SCAP-202ENST00000320017 Q6ZUG5 572 aa17.09■□□□□ 0.33
SCAP-202ENST00000320017 CTAGE6Q86UF2 777 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms