RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 RRP1P56182 461 aaKnown RBP14.98□□□□□ -0.01
ABCD3-201ENST00000315713 ATP8B2P98198 1209 aa14.98□□□□□ -0.01
ABCD3-201ENST00000315713 VGLL4Q14135 290 aa14.98□□□□□ -0.01
ABCD3-201ENST00000315713 VPS37DQ86XT2 251 aa14.98□□□□□ -0.01
ABCD3-201ENST00000315713 MS4A4AQ96JQ5 239 aa14.98□□□□□ -0.01
ABCD3-201ENST00000315713 TMEM39BQ9GZU3 492 aa14.98□□□□□ -0.01
ABCD3-201ENST00000315713 EFCC1Q9HA90 598 aa14.98□□□□□ -0.01
ABCD3-201ENST00000315713 SERPINA10Q9UK55 444 aa14.98□□□□□ -0.01
ABCD3-201ENST00000315713 SLC5A1P13866 664 aa14.97□□□□□ -0.01
ABCD3-201ENST00000315713 CRKP46108 304 aa14.97□□□□□ -0.01
ABCD3-201ENST00000315713 SP3Q02447 781 aa14.97□□□□□ -0.01
ABCD3-201ENST00000315713 G3BP1Q13283 466 aaKnown RBP eCLIP14.97□□□□□ -0.01
ABCD3-201ENST00000315713 GRIK5Q16478 980 aa14.97□□□□□ -0.01
ABCD3-201ENST00000315713 CAVIN4Q5BKX8 364 aa14.97□□□□□ -0.01
ABCD3-201ENST00000315713 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.97□□□□□ -0.01
ABCD3-201ENST00000315713 BRI3BPQ8WY22 251 aa14.97□□□□□ -0.01
ABCD3-201ENST00000315713 ARMC5Q96C12 935 aa14.97□□□□□ -0.01
ABCD3-201ENST00000315713 IQSEC3Q9UPP2 1182 aaPredicted RBP14.97□□□□□ -0.01
ABCD3-201ENST00000315713 EN2P19622 333 aaPredicted RBP14.96□□□□□ -0.01
ABCD3-201ENST00000315713 HIBADHP31937 336 aaKnown RBP14.96□□□□□ -0.01
ABCD3-201ENST00000315713 OS9Q13438 667 aaPredicted RBP14.96□□□□□ -0.01
ABCD3-201ENST00000315713 POLA2Q14181 598 aa14.96□□□□□ -0.01
ABCD3-201ENST00000315713 CEP85Q6P2H3 762 aa14.96□□□□□ -0.01
ABCD3-201ENST00000315713 SSH3Q8TE77 659 aa14.96□□□□□ -0.01
ABCD3-201ENST00000315713 LPIN2Q92539 896 aa14.96□□□□□ -0.01
ABCD3-201ENST00000315713 FAM84BQ96KN1 310 aaPredicted RBP14.96□□□□□ -0.01
ABCD3-201ENST00000315713 CCL15-CCL14A0A0B4J2E2 113 aa14.95□□□□□ -0.02
ABCD3-201ENST00000315713 CACNB3P54284 484 aa14.95□□□□□ -0.02
ABCD3-201ENST00000315713 CHAF1AQ13111 956 aaPredicted RBP14.95□□□□□ -0.02
ABCD3-201ENST00000315713 TAF1CQ15572 869 aaPredicted RBP14.95□□□□□ -0.02
ABCD3-201ENST00000315713 CCL15Q16663 113 aa14.95□□□□□ -0.02
ABCD3-201ENST00000315713 ATP2B3Q16720 1220 aa14.95□□□□□ -0.02
ABCD3-201ENST00000315713 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.95□□□□□ -0.02
ABCD3-201ENST00000315713 GCC1Q96CN9 775 aa14.95□□□□□ -0.02
ABCD3-201ENST00000315713 OTUD5Q96G74 571 aa14.95□□□□□ -0.02
ABCD3-201ENST00000315713 ZBTB40Q9NUA8 1239 aa14.95□□□□□ -0.02
ABCD3-201ENST00000315713 PTCH2Q9Y6C5 1203 aa14.95□□□□□ -0.02
ABCD3-201ENST00000315713 FRAT2O75474 233 aaPredicted RBP14.94□□□□□ -0.02
ABCD3-201ENST00000315713 SURF6O75683 361 aaKnown RBP14.94□□□□□ -0.02
ABCD3-201ENST00000315713 FGFR2P21802 821 aa14.94□□□□□ -0.02
ABCD3-201ENST00000315713 TFCP2Q12800 502 aa14.94□□□□□ -0.02
ABCD3-201ENST00000315713 HABP4Q5JVS0 413 aaKnown RBP14.94□□□□□ -0.02
ABCD3-201ENST00000315713 FAM43AQ8N2R8 423 aa14.94□□□□□ -0.02
ABCD3-201ENST00000315713 ZNF333Q96JL9 665 aa14.94□□□□□ -0.02
ABCD3-201ENST00000315713 CSADQ9Y600 493 aa14.94□□□□□ -0.02
ABCD3-201ENST00000315713 PHIPQ8WWQ0 1821 aa14.94□□□□□ -0.02
ABCD3-201ENST00000315713 DOCK1Q14185 1865 aa14.93□□□□□ -0.02
ABCD3-201ENST00000315713 TNNI2P48788 182 aa14.93□□□□□ -0.02
ABCD3-201ENST00000315713 GTF2A2P52657 109 aa14.93□□□□□ -0.02
ABCD3-201ENST00000315713 RPAP2Q8IXW5 612 aaPredicted RBP14.93□□□□□ -0.02
ABCD3-201ENST00000315713 AKAP2Q9Y2D5 859 aa14.93□□□□□ -0.02
ABCD3-201ENST00000315713 SNCAIPQ9Y6H5 919 aa14.93□□□□□ -0.02
ABCD3-201ENST00000315713 DOCK3Q8IZD9 2030 aa14.93□□□□□ -0.02
ABCD3-201ENST00000315713 ATAD5Q96QE3 1844 aa14.92□□□□□ -0.02
ABCD3-201ENST00000315713 SPDYE5A6NIY4 337 aa14.92□□□□□ -0.02
ABCD3-201ENST00000315713 HMMRO75330 724 aa14.92□□□□□ -0.02
ABCD3-201ENST00000315713 BCAMP50895 628 aa14.92□□□□□ -0.02
ABCD3-201ENST00000315713 MAP3K9P80192 1104 aa14.92□□□□□ -0.02
ABCD3-201ENST00000315713 SLC9C1Q4G0N8 1177 aa14.92□□□□□ -0.02
ABCD3-201ENST00000315713 FBXO33Q7Z6M2 555 aa14.92□□□□□ -0.02
ABCD3-201ENST00000315713 ARHGAP39Q9C0H5 1083 aa14.92□□□□□ -0.02
ABCD3-201ENST00000315713 ZFYVE28Q9HCC9 887 aa14.92□□□□□ -0.02
ABCD3-201ENST00000315713 RPAP1Q9BWH6 1393 aaPredicted RBP14.91□□□□□ -0.02
ABCD3-201ENST00000315713 A0A1B0GUL7 405 aa14.91□□□□□ -0.02
ABCD3-201ENST00000315713 MYCP01106 439 aaPredicted RBP14.91□□□□□ -0.02
ABCD3-201ENST00000315713 TEKT1Q969V4 418 aa14.91□□□□□ -0.02
ABCD3-201ENST00000315713 NEUROD6Q96NK8 337 aa14.91□□□□□ -0.02
ABCD3-201ENST00000315713 WRNIP1Q96S55 665 aa14.91□□□□□ -0.02
ABCD3-201ENST00000315713 RANBP2P49792 3224 aaKnown RBP14.9□□□□□ -0.02
ABCD3-201ENST00000315713 TIMM10P62072 90 aa14.9□□□□□ -0.02
ABCD3-201ENST00000315713 TMEM106CQ9BVX2 250 aa14.9□□□□□ -0.02
ABCD3-201ENST00000315713 GNL3LQ9NVN8 582 aaKnown RBP14.9□□□□□ -0.02
ABCD3-201ENST00000315713 NOP58Q9Y2X3 529 aaKnown RBP14.9□□□□□ -0.02
ABCD3-201ENST00000315713 SZT2Q5T011 3432 aa14.9□□□□□ -0.02
ABCD3-201ENST00000315713 ALPK3Q96L96 1907 aa14.9□□□□□ -0.02
ABCD3-201ENST00000315713 BTBD19C9JJ37 291 aa14.89□□□□□ -0.03
ABCD3-201ENST00000315713 ADORA1P30542 326 aa14.89□□□□□ -0.03
ABCD3-201ENST00000315713 HSP90AB4PQ58FF6 505 aa14.89□□□□□ -0.03
ABCD3-201ENST00000315713 TBC1D22AQ8WUA7 517 aa14.89□□□□□ -0.03
ABCD3-201ENST00000315713 ZKSCAN4Q969J2 545 aaPredicted RBP14.89□□□□□ -0.03
ABCD3-201ENST00000315713 TMOD2Q9NZR1 351 aa14.89□□□□□ -0.03
ABCD3-201ENST00000315713 EXOC6BQ9Y2D4 811 aa14.89□□□□□ -0.03
ABCD3-201ENST00000315713 IRF6O14896 467 aa14.88□□□□□ -0.03
ABCD3-201ENST00000315713 ECM2O94769 699 aaPredicted RBP14.88□□□□□ -0.03
ABCD3-201ENST00000315713 CETPP11597 493 aa14.88□□□□□ -0.03
ABCD3-201ENST00000315713 LACTBP83111 547 aaPredicted RBP14.88□□□□□ -0.03
ABCD3-201ENST00000315713 HDLBPQ00341 1268 aaKnown RBP14.88□□□□□ -0.03
ABCD3-201ENST00000315713 SLC4A8Q2Y0W8 1093 aa14.88□□□□□ -0.03
ABCD3-201ENST00000315713 GORABQ5T7V8 394 aa14.88□□□□□ -0.03
ABCD3-201ENST00000315713 ERO1BQ86YB8 467 aa14.88□□□□□ -0.03
ABCD3-201ENST00000315713 ERC1Q8IUD2 1116 aa14.88□□□□□ -0.03
ABCD3-201ENST00000315713 SH3TC2Q8TF17 1288 aa14.88□□□□□ -0.03
ABCD3-201ENST00000315713 XAGE2Q96GT9 111 aa14.88□□□□□ -0.03
ABCD3-201ENST00000315713 ZDHHC15Q96MV8 337 aa14.88□□□□□ -0.03
ABCD3-201ENST00000315713 CRBNQ96SW2 442 aa14.88□□□□□ -0.03
ABCD3-201ENST00000315713 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.88□□□□□ -0.03
ABCD3-201ENST00000315713 MAST3O60307 1309 aa14.88□□□□□ -0.03
ABCD3-201ENST00000315713 TLR2O60603 784 aa14.87□□□□□ -0.03
ABCD3-201ENST00000315713 PHKA1P46020 1223 aa14.87□□□□□ -0.03
ABCD3-201ENST00000315713 PPIL2Q13356 520 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms