RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 NEFLP07196 543 aa9.62□□□□□ -0.87
CDC42-201ENST00000315554 UQCRFS1P1P0C7P4 283 aa9.62□□□□□ -0.87
CDC42-201ENST00000315554 ARID4AP29374 1257 aaPredicted RBP9.62□□□□□ -0.87
CDC42-201ENST00000315554 PRDX5P30044 214 aa9.62□□□□□ -0.87
CDC42-201ENST00000315554 ZAP70P43403 619 aa9.62□□□□□ -0.87
CDC42-201ENST00000315554 RBM5P52756 815 aaKnown RBP eCLIP9.62□□□□□ -0.87
CDC42-201ENST00000315554 ZNF280AP59817 542 aaPredicted RBP9.62□□□□□ -0.87
CDC42-201ENST00000315554 MAP1SQ66K74 1059 aaPredicted RBP9.62□□□□□ -0.87
CDC42-201ENST00000315554 SPATA5Q8NB90 893 aa9.62□□□□□ -0.87
CDC42-201ENST00000315554 MYOZ2Q9NPC6 264 aa9.62□□□□□ -0.87
CDC42-201ENST00000315554 ABCF2Q9UG63 623 aa9.62□□□□□ -0.87
CDC42-201ENST00000315554 SCN4AP35499 1836 aa9.62□□□□□ -0.87
CDC42-201ENST00000315554 SEMA3EO15041 775 aa9.61□□□□□ -0.87
CDC42-201ENST00000315554 VASPP50552 380 aaPredicted RBP9.61□□□□□ -0.87
CDC42-201ENST00000315554 FKBP1AP62942 108 aaKnown RBP9.61□□□□□ -0.87
CDC42-201ENST00000315554 DIXDC1Q155Q3 683 aa9.61□□□□□ -0.87
CDC42-201ENST00000315554 NBPF9Q3BBW0 867 aa9.61□□□□□ -0.87
CDC42-201ENST00000315554 CFAP100Q494V2 611 aa9.61□□□□□ -0.87
CDC42-201ENST00000315554 DLK2Q6UY11 383 aa9.61□□□□□ -0.87
CDC42-201ENST00000315554 USP50Q70EL3 339 aaPredicted RBP9.61□□□□□ -0.87
CDC42-201ENST00000315554 OGFOD1Q8N543 542 aa9.61□□□□□ -0.87
CDC42-201ENST00000315554 WDR66Q8TBY9 1149 aa9.61□□□□□ -0.87
CDC42-201ENST00000315554 TBC1D22AQ8WUA7 517 aa9.61□□□□□ -0.87
CDC42-201ENST00000315554 GCC1Q96CN9 775 aa9.61□□□□□ -0.87
CDC42-201ENST00000315554 DNAJC2Q99543 621 aaKnown RBP9.61□□□□□ -0.87
CDC42-201ENST00000315554 HDAC9Q9UKV0 1011 aa9.61□□□□□ -0.87
CDC42-201ENST00000315554 ADAMTSL1Q8N6G6 1762 aa9.61□□□□□ -0.87
CDC42-201ENST00000315554 TOMM70O94826 608 aa9.6□□□□□ -0.87
CDC42-201ENST00000315554 LDHBP07195 334 aaKnown RBP9.6□□□□□ -0.87
CDC42-201ENST00000315554 CRKP46108 304 aa9.6□□□□□ -0.87
CDC42-201ENST00000315554 FMR1Q06787 632 aaKnown RBP eCLIP9.6□□□□□ -0.872e-14■■■■■ 50.5
CDC42-201ENST00000315554 PNMA8AQ86V59 439 aaPredicted RBP9.6□□□□□ -0.87
CDC42-201ENST00000315554 LDHDQ86WU2 507 aa9.6□□□□□ -0.87
CDC42-201ENST00000315554 EDC3Q96F86 508 aaKnown RBP9.6□□□□□ -0.87
CDC42-201ENST00000315554 LNPKQ9C0E8 428 aa9.6□□□□□ -0.87
CDC42-201ENST00000315554 BOLA2Q9H3K6 86 aa9.6□□□□□ -0.87
CDC42-201ENST00000315554 ANTXR1Q9H6X2 564 aa9.6□□□□□ -0.87
CDC42-201ENST00000315554 PIH1D3Q9NQM4 214 aaKnown RBP9.6□□□□□ -0.87
CDC42-201ENST00000315554 GGA3Q9NZ52 723 aa9.6□□□□□ -0.87
CDC42-201ENST00000315554 MYH13Q9UKX3 1938 aa9.6□□□□□ -0.87
CDC42-201ENST00000315554 CLRN2A0PK11 232 aa9.59□□□□□ -0.87
CDC42-201ENST00000315554 CYP2E1P05181 493 aaPredicted RBP9.59□□□□□ -0.87
CDC42-201ENST00000315554 DLGAP5Q15398 846 aa9.59□□□□□ -0.87
CDC42-201ENST00000315554 ANGEL2Q5VTE6 544 aaKnown RBP9.59□□□□□ -0.87
CDC42-201ENST00000315554 SMC5Q8IY18 1101 aa9.59□□□□□ -0.87
CDC42-201ENST00000315554 SMC1BQ8NDV3 1235 aa9.59□□□□□ -0.87
CDC42-201ENST00000315554 RBM46Q8TBY0 533 aaKnown RBP9.59□□□□□ -0.87
CDC42-201ENST00000315554 GLIS2Q9BZE0 524 aaPredicted RBP9.59□□□□□ -0.87
CDC42-201ENST00000315554 RAI14Q9P0K7 980 aa9.59□□□□□ -0.87
CDC42-201ENST00000315554 SALL1Q9NSC2 1324 aa9.59□□□□□ -0.87
CDC42-201ENST00000315554 ADM5C9JUS6 153 aa9.59□□□□□ -0.87
CDC42-201ENST00000315554 GOLIM4O00461 696 aa9.59□□□□□ -0.87
CDC42-201ENST00000315554 TRAF5O00463 557 aa9.59□□□□□ -0.87
CDC42-201ENST00000315554 WNT10BO00744 389 aa9.59□□□□□ -0.87
CDC42-201ENST00000315554 MAP4K4O95819 1239 aaPredicted RBP9.59□□□□□ -0.87
CDC42-201ENST00000315554 USP48Q86UV5 1035 aa9.59□□□□□ -0.87
CDC42-201ENST00000315554 DZIP1Q86YF9 867 aaKnown RBP9.59□□□□□ -0.87
CDC42-201ENST00000315554 ZNF512BQ96KM6 892 aaPredicted RBP9.59□□□□□ -0.87
CDC42-201ENST00000315554 PRMT6Q96LA8 375 aaPredicted RBP9.59□□□□□ -0.87
CDC42-201ENST00000315554 ECHDC1Q9NTX5 307 aa9.59□□□□□ -0.87
CDC42-201ENST00000315554 LRP2BPQ9P2M1 347 aa9.59□□□□□ -0.87
CDC42-201ENST00000315554 PDS5AQ29RF7 1337 aaKnown RBP9.58□□□□□ -0.88
CDC42-201ENST00000315554 IDH1O75874 414 aaKnown RBP9.58□□□□□ -0.88
CDC42-201ENST00000315554 ATP5JP18859 108 aa9.58□□□□□ -0.88
CDC42-201ENST00000315554 CACNB3P54284 484 aa9.58□□□□□ -0.88
CDC42-201ENST00000315554 NUCB1Q02818 461 aa9.58□□□□□ -0.88
CDC42-201ENST00000315554 MECOMQ03112 1051 aa9.58□□□□□ -0.88
CDC42-201ENST00000315554 PDAP1Q13442 181 aaKnown RBP9.58□□□□□ -0.88
CDC42-201ENST00000315554 PRAMEF18Q5VWM3 479 aa9.58□□□□□ -0.88
CDC42-201ENST00000315554 CHD1LQ86WJ1 897 aa9.58□□□□□ -0.88
CDC42-201ENST00000315554 CNTROBQ8N137 903 aa9.58□□□□□ -0.88
CDC42-201ENST00000315554 ZNF384Q8TF68 577 aa9.58□□□□□ -0.88
CDC42-201ENST00000315554 TEKT1Q969V4 418 aa9.58□□□□□ -0.88
CDC42-201ENST00000315554 ZBED3Q96IU2 234 aaPredicted RBP9.58□□□□□ -0.88
CDC42-201ENST00000315554 TDRD3Q9H7E2 651 aaKnown RBP9.58□□□□□ -0.88
CDC42-201ENST00000315554 VEZTQ9HBM0 779 aa9.58□□□□□ -0.88
CDC42-201ENST00000315554 DAGLAQ9Y4D2 1042 aa9.58□□□□□ -0.88
CDC42-201ENST00000315554 MX1P20591 662 aa9.57□□□□□ -0.88
CDC42-201ENST00000315554 C1QTNF8P60827 252 aa9.57□□□□□ -0.88
CDC42-201ENST00000315554 SPTY2D1Q68D10 685 aaPredicted RBP9.57□□□□□ -0.88
CDC42-201ENST00000315554 KRT26Q7Z3Y9 468 aa9.57□□□□□ -0.88
CDC42-201ENST00000315554 SKAP1Q86WV1 359 aa9.57□□□□□ -0.88
CDC42-201ENST00000315554 ZGPATQ8N5A5 531 aaKnown RBP9.57□□□□□ -0.88
CDC42-201ENST00000315554 DCPSQ96C86 337 aaKnown RBP9.57□□□□□ -0.88
CDC42-201ENST00000315554 GPATCH3Q96I76 525 aa9.57□□□□□ -0.88
CDC42-201ENST00000315554 SERPINA10Q9UK55 444 aa9.57□□□□□ -0.88
CDC42-201ENST00000315554 SUGT1Q9Y2Z0 365 aa9.57□□□□□ -0.88
CDC42-201ENST00000315554 AKAP11Q9UKA4 1901 aa9.57□□□□□ -0.88
CDC42-201ENST00000315554 MAST3O60307 1309 aa9.57□□□□□ -0.88
CDC42-201ENST00000315554 TCP10L2B9ZVM9 353 aa9.56□□□□□ -0.88
CDC42-201ENST00000315554 ITGBL1O95965 494 aaPredicted RBP9.56□□□□□ -0.88
CDC42-201ENST00000315554 CHGBP05060 677 aa9.56□□□□□ -0.88
CDC42-201ENST00000315554 SLFNL1Q499Z3 407 aa9.56□□□□□ -0.88
CDC42-201ENST00000315554 APOBEC3HQ6NTF7 200 aaKnown RBP9.56□□□□□ -0.88
CDC42-201ENST00000315554 ADGRA1Q86SQ6 560 aa9.56□□□□□ -0.88
CDC42-201ENST00000315554 MTMR14Q8NCE2 650 aa9.56□□□□□ -0.88
CDC42-201ENST00000315554 ZC3H15Q8WU90 426 aaKnown RBP9.56□□□□□ -0.88
CDC42-201ENST00000315554 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.56□□□□□ -0.88
CDC42-201ENST00000315554 NSUN4Q96CB9 384 aaKnown RBP9.56□□□□□ -0.88
CDC42-201ENST00000315554 HAUS7Q99871 368 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms