RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 ZAP70P43403 619 aa15.49■□□□□ 0.07
SKA3-202ENST00000314759 FAM193AP78312 1265 aa15.49■□□□□ 0.07
SKA3-202ENST00000314759 ST5P78524 1137 aa15.49■□□□□ 0.07
SKA3-202ENST00000314759 CCDC191Q8NCU4 936 aa15.49■□□□□ 0.07
SKA3-202ENST00000314759 APPBP2Q92624 585 aa15.49■□□□□ 0.07
SKA3-202ENST00000314759 CLIC6Q96NY7 704 aa15.49■□□□□ 0.07
SKA3-202ENST00000314759 ALG1Q9BT22 464 aa15.49■□□□□ 0.07
SKA3-202ENST00000314759 TAOK2Q9UL54 1235 aa15.49■□□□□ 0.07
SKA3-202ENST00000314759 CBFA2T2O43439 604 aa15.48■□□□□ 0.07
SKA3-202ENST00000314759 PPP6R2O75170 966 aa15.48■□□□□ 0.07
SKA3-202ENST00000314759 URI1O94763 535 aaPredicted RBP15.48■□□□□ 0.07
SKA3-202ENST00000314759 A1BGP04217 495 aa15.48■□□□□ 0.07
SKA3-202ENST00000314759 PI16Q6UXB8 463 aa15.48■□□□□ 0.07
SKA3-202ENST00000314759 FOXP4Q8IVH2 680 aaPredicted RBP15.48■□□□□ 0.07
SKA3-202ENST00000314759 MAP3K14Q99558 947 aa15.48■□□□□ 0.07
SKA3-202ENST00000314759 NBPF3Q9H094 633 aa15.48■□□□□ 0.07
SKA3-202ENST00000314759 FANCLQ9NW38 375 aa15.48■□□□□ 0.07
SKA3-202ENST00000314759 GLI3P10071 1580 aa15.48■□□□□ 0.07
SKA3-202ENST00000314759 GPAA1O43292 621 aa15.48■□□□□ 0.07
SKA3-202ENST00000314759 TADA3O75528 432 aa15.48■□□□□ 0.07
SKA3-202ENST00000314759 KRT40Q6A162 431 aa15.48■□□□□ 0.07
SKA3-202ENST00000314759 TMCO3Q6UWJ1 677 aa15.48■□□□□ 0.07
SKA3-202ENST00000314759 METTL16Q86W50 562 aaKnown RBP15.48■□□□□ 0.07
SKA3-202ENST00000314759 PARP3Q9Y6F1 533 aa15.48■□□□□ 0.07
SKA3-202ENST00000314759 CPDO75976 1380 aa15.48■□□□□ 0.07
SKA3-202ENST00000314759 FAM237AA0A1B0GTK4 181 aa15.47■□□□□ 0.07
SKA3-202ENST00000314759 TOP1P11387 765 aaKnown RBP15.47■□□□□ 0.07
SKA3-202ENST00000314759 RXRAP19793 462 aa15.47■□□□□ 0.07
SKA3-202ENST00000314759 LONRF3Q496Y0 759 aa15.47■□□□□ 0.07
SKA3-202ENST00000314759 RESP18Q5W5W9 173 aa15.47■□□□□ 0.07
SKA3-202ENST00000314759 TMEM139Q8IV31 216 aa15.47■□□□□ 0.07
SKA3-202ENST00000314759 INTS13Q9NVM9 706 aa15.47■□□□□ 0.07
SKA3-202ENST00000314759 WDR19Q8NEZ3 1342 aa15.47■□□□□ 0.07
SKA3-202ENST00000314759 SASH3O75995 380 aa15.47■□□□□ 0.07
SKA3-202ENST00000314759 RAD51AP2Q09MP3 1159 aa15.47■□□□□ 0.07
SKA3-202ENST00000314759 CREBRFQ8IUR6 639 aa15.47■□□□□ 0.07
SKA3-202ENST00000314759 MNS1Q8NEH6 495 aa15.47■□□□□ 0.07
SKA3-202ENST00000314759 CARD6Q9BX69 1037 aa15.47■□□□□ 0.07
SKA3-202ENST00000314759 ZMYM6O95789 1325 aa15.47■□□□□ 0.07
SKA3-202ENST00000314759 VWA3AA6NCI4 1184 aa15.47■□□□□ 0.07
SKA3-202ENST00000314759 CDC27P30260 824 aa15.47■□□□□ 0.07
SKA3-202ENST00000314759 JMYQ8N9B5 988 aa15.47■□□□□ 0.07
SKA3-202ENST00000314759 RGS22Q8NE09 1264 aa15.47■□□□□ 0.07
SKA3-202ENST00000314759 PHKBQ93100 1093 aa15.47■□□□□ 0.07
SKA3-202ENST00000314759 SMARCE1Q969G3 411 aa15.47■□□□□ 0.07
SKA3-202ENST00000314759 SRRTQ9BXP5 876 aaKnown RBP15.47■□□□□ 0.07
SKA3-202ENST00000314759 TRIM34Q9BYJ4 488 aa15.47■□□□□ 0.07
SKA3-202ENST00000314759 ANGEL1Q9UNK9 670 aaKnown RBP15.47■□□□□ 0.07
SKA3-202ENST00000314759 TJP1Q07157 1748 aa15.46■□□□□ 0.07
SKA3-202ENST00000314759 KIF1AQ12756 1690 aa15.46■□□□□ 0.07
SKA3-202ENST00000314759 BMP6P22004 513 aa15.46■□□□□ 0.07
SKA3-202ENST00000314759 METAP2P50579 478 aaKnown RBP eCLIP15.46■□□□□ 0.07
SKA3-202ENST00000314759 CCDC57Q2TAC2 916 aa15.46■□□□□ 0.07
SKA3-202ENST00000314759 CYB5R4Q7L1T6 521 aa15.46■□□□□ 0.07
SKA3-202ENST00000314759 FEZ2Q9UHY8 353 aaPredicted RBP15.46■□□□□ 0.07
SKA3-202ENST00000314759 PCDHA5Q9Y5H7 936 aa15.46■□□□□ 0.07
SKA3-202ENST00000314759 EFCAB8A8MWE9 144 aa15.46■□□□□ 0.06
SKA3-202ENST00000314759 PDE4BQ07343 736 aa15.46■□□□□ 0.06
SKA3-202ENST00000314759 SLC20A2Q08357 652 aa15.46■□□□□ 0.06
SKA3-202ENST00000314759 OLFM4Q6UX06 510 aa15.46■□□□□ 0.06
SKA3-202ENST00000314759 SENP2Q9HC62 589 aa15.46■□□□□ 0.06
SKA3-202ENST00000314759 ARGLU1Q9NWB6 273 aaPredicted RBP15.46■□□□□ 0.06
SKA3-202ENST00000314759 AKAP2Q9Y2D5 859 aa15.46■□□□□ 0.06
SKA3-202ENST00000314759 PPP2R2CQ9Y2T4 447 aa15.46■□□□□ 0.06
SKA3-202ENST00000314759 FCHSD1Q86WN1 690 aa15.45■□□□□ 0.06
SKA3-202ENST00000314759 TBC1D10CQ8IV04 446 aa15.45■□□□□ 0.06
SKA3-202ENST00000314759 FAM177A1Q8N128 213 aaPredicted RBP15.45■□□□□ 0.06
SKA3-202ENST00000314759 IPO4Q8TEX9 1081 aaKnown RBP15.45■□□□□ 0.06
SKA3-202ENST00000314759 C4AP0C0L4 1744 aa15.45■□□□□ 0.06
SKA3-202ENST00000314759 C4BP0C0L5 1744 aa15.45■□□□□ 0.06
SKA3-202ENST00000314759 DDX60Q8IY21 1712 aaKnown RBP15.45■□□□□ 0.06
SKA3-202ENST00000314759 ARHGAP6O43182 974 aa15.45■□□□□ 0.06
SKA3-202ENST00000314759 ZSCAN12O43309 604 aa15.45■□□□□ 0.06
SKA3-202ENST00000314759 TRDNQ13061 729 aa15.45■□□□□ 0.06
SKA3-202ENST00000314759 GNL2Q13823 731 aaKnown RBP15.45■□□□□ 0.06
SKA3-202ENST00000314759 CHRNA2Q15822 529 aa15.45■□□□□ 0.06
SKA3-202ENST00000314759 HSP90AA4PQ58FG1 418 aa15.45■□□□□ 0.06
SKA3-202ENST00000314759 CCDC102BQ68D86 513 aa15.45■□□□□ 0.06
SKA3-202ENST00000314759 KRBA2Q6ZNG9 492 aa15.45■□□□□ 0.06
SKA3-202ENST00000314759 CCDC85AQ96PX6 553 aaPredicted RBP15.45■□□□□ 0.06
SKA3-202ENST00000314759 C19orf44Q9H6X5 657 aa15.45■□□□□ 0.06
SKA3-202ENST00000314759 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.45■□□□□ 0.06
SKA3-202ENST00000314759 KCNH3Q9ULD8 1083 aa15.45■□□□□ 0.06
SKA3-202ENST00000314759 FOXN1O15353 648 aa15.44■□□□□ 0.06
SKA3-202ENST00000314759 CNNM3Q8NE01 707 aa15.44■□□□□ 0.06
SKA3-202ENST00000314759 SH2B2O14492 632 aaPredicted RBP15.44■□□□□ 0.06
SKA3-202ENST00000314759 GYS2P54840 703 aa15.44■□□□□ 0.06
SKA3-202ENST00000314759 APOA5Q6Q788 366 aa15.44■□□□□ 0.06
SKA3-202ENST00000314759 CABLES1Q8TDN4 633 aa15.44■□□□□ 0.06
SKA3-202ENST00000314759 WDR24Q96S15 920 aa15.44■□□□□ 0.06
SKA3-202ENST00000314759 MST1RQ04912 1400 aa15.44■□□□□ 0.06
SKA3-202ENST00000314759 LAMB4A4D0S4 1761 aa15.44■□□□□ 0.06
SKA3-202ENST00000314759 ZNF142P52746 1687 aaPredicted RBP15.44■□□□□ 0.06
SKA3-202ENST00000314759 UBE2Q2LH0YL09 131 aa15.44■□□□□ 0.06
SKA3-202ENST00000314759 MYO1BO43795 1136 aa15.44■□□□□ 0.06
SKA3-202ENST00000314759 CDKL5O76039 1030 aa15.44■□□□□ 0.06
SKA3-202ENST00000314759 TBC1D8O95759 1140 aa15.44■□□□□ 0.06
SKA3-202ENST00000314759 TBX2Q13207 712 aaPredicted RBP15.44■□□□□ 0.06
SKA3-202ENST00000314759 MICU3Q86XE3 530 aa15.44■□□□□ 0.06
SKA3-202ENST00000314759 CCDC34Q96HJ3 373 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms