RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 PNKPQ96T60 521 aa20.7■□□□□ 0.9
SPSB4-201ENST00000310546 ABCB6Q9NP58 842 aa20.7■□□□□ 0.9
SPSB4-201ENST00000310546 BTG4Q9NY30 223 aa20.7■□□□□ 0.9
SPSB4-201ENST00000310546 C9orf78Q9NZ63 289 aaPredicted RBP20.7■□□□□ 0.9
SPSB4-201ENST00000310546 CLIC4Q9Y696 253 aa20.7■□□□□ 0.9
SPSB4-201ENST00000310546 KDM3BQ7LBC6 1761 aa20.7■□□□□ 0.9
SPSB4-201ENST00000310546 WDHD1O75717 1129 aaPredicted RBP20.7■□□□□ 0.9
SPSB4-201ENST00000310546 MTX1Q13505 466 aa20.7■□□□□ 0.9
SPSB4-201ENST00000310546 TMEM139Q8IV31 216 aa20.7■□□□□ 0.9
SPSB4-201ENST00000310546 ANKZF1Q9H8Y5 726 aa20.7■□□□□ 0.9
SPSB4-201ENST00000310546 ZNF330Q9Y3S2 320 aaPredicted RBP20.7■□□□□ 0.9
SPSB4-201ENST00000310546 OTUD7BQ6GQQ9 843 aa20.69■□□□□ 0.9
SPSB4-201ENST00000310546 GOLGA6L9A6NEM1 432 aa20.69■□□□□ 0.9
SPSB4-201ENST00000310546 RHOXF2BP0C7M4 288 aa20.69■□□□□ 0.9
SPSB4-201ENST00000310546 ATL3Q6DD88 541 aa20.69■□□□□ 0.9
SPSB4-201ENST00000310546 CCDC129Q6ZRS4 1044 aa20.69■□□□□ 0.9
SPSB4-201ENST00000310546 MICALL1Q8N3F8 863 aa20.69■□□□□ 0.9
SPSB4-201ENST00000310546 RHOXF2Q9BQY4 288 aa20.69■□□□□ 0.9
SPSB4-201ENST00000310546 CRYBG1Q9Y4K1 1723 aa20.69■□□□□ 0.9
SPSB4-201ENST00000310546 NEDD4P46934 1319 aa20.69■□□□□ 0.9
SPSB4-201ENST00000310546 RPS6KA5O75582 802 aa20.68■□□□□ 0.9
SPSB4-201ENST00000310546 CHGBP05060 677 aa20.68■□□□□ 0.9
SPSB4-201ENST00000310546 PHKG2P15735 406 aa20.68■□□□□ 0.9
SPSB4-201ENST00000310546 LLPHQ9BRT6 129 aaKnown RBP20.68■□□□□ 0.9
SPSB4-201ENST00000310546 LZTFL1Q9NQ48 299 aa20.68■□□□□ 0.9
SPSB4-201ENST00000310546 IKBKBO14920 756 aa20.68■□□□□ 0.9
SPSB4-201ENST00000310546 PTCD1O75127 700 aaKnown RBP20.68■□□□□ 0.9
SPSB4-201ENST00000310546 ERLIN1O75477 346 aa20.68■□□□□ 0.9
SPSB4-201ENST00000310546 CYP21A2P08686 494 aa20.68■□□□□ 0.9
SPSB4-201ENST00000310546 MED23Q9ULK4 1368 aa20.68■□□□□ 0.9
SPSB4-201ENST00000310546 PXDNLA1KZ92 1463 aa20.67■□□□□ 0.9
SPSB4-201ENST00000310546 PHLPP1O60346 1717 aa20.67■□□□□ 0.9
SPSB4-201ENST00000310546 PFKFB2O60825 505 aa20.67■□□□□ 0.9
SPSB4-201ENST00000310546 SRGAP1Q7Z6B7 1085 aa20.67■□□□□ 0.9
SPSB4-201ENST00000310546 LINC00301Q8NCQ3 95 aa20.67■□□□□ 0.9
SPSB4-201ENST00000310546 FAM204AQ9H8W3 233 aa20.67■□□□□ 0.9
SPSB4-201ENST00000310546 L1RE1Q9UN81 338 aa20.67■□□□□ 0.9
SPSB4-201ENST00000310546 A0A1W2PQ27 194 aa20.67■□□□□ 0.9
SPSB4-201ENST00000310546 A0A1W2PQ64 194 aa20.67■□□□□ 0.9
SPSB4-201ENST00000310546 A0A1W2PQD8 194 aa20.67■□□□□ 0.9
SPSB4-201ENST00000310546 MYL5Q02045 173 aa20.67■□□□□ 0.9
SPSB4-201ENST00000310546 SNRKQ9NRH2 765 aa20.67■□□□□ 0.9
SPSB4-201ENST00000310546 FANCLQ9NW38 375 aa20.67■□□□□ 0.9
SPSB4-201ENST00000310546 NDUFB9Q9Y6M9 179 aa20.67■□□□□ 0.9
SPSB4-201ENST00000310546 MEGF6O75095 1541 aa20.67■□□□□ 0.9
SPSB4-201ENST00000310546 HNRNPLLQ8WVV9 542 aaKnown RBP20.67■□□□□ 0.9
SPSB4-201ENST00000310546 RTEL1Q9NZ71 1219 aa20.67■□□□□ 0.9
SPSB4-201ENST00000310546 CUTAO60888 179 aa20.66■□□□□ 0.9
SPSB4-201ENST00000310546 MYCNP04198 464 aaPredicted RBP20.66■□□□□ 0.9
SPSB4-201ENST00000310546 CT47A1Q5JQC4 288 aaPredicted RBP20.66■□□□□ 0.9
SPSB4-201ENST00000310546 EP400NLQ6ZTU2 488 aa20.66■□□□□ 0.9
SPSB4-201ENST00000310546 COL18A1P39060 1754 aa20.66■□□□□ 0.9
SPSB4-201ENST00000310546 ALDH1L1O75891 902 aa20.66■□□□□ 0.9
SPSB4-201ENST00000310546 SASH1O94885 1247 aa20.66■□□□□ 0.9
SPSB4-201ENST00000310546 CASP8Q14790 479 aa20.66■□□□□ 0.9
SPSB4-201ENST00000310546 CCDC91Q7Z6B0 441 aa20.66■□□□□ 0.9
SPSB4-201ENST00000310546 ZNF496Q96IT1 587 aaPredicted RBP20.66■□□□□ 0.9
SPSB4-201ENST00000310546 TAOK2Q9UL54 1235 aa20.66■□□□□ 0.9
SPSB4-201ENST00000310546 SPTLC2O15270 562 aa20.65■□□□□ 0.9
SPSB4-201ENST00000310546 TFRCP02786 760 aaKnown RBP20.65■□□□□ 0.9
SPSB4-201ENST00000310546 G3BP1Q13283 466 aaKnown RBP eCLIP20.65■□□□□ 0.9
SPSB4-201ENST00000310546 MMS22LQ6ZRQ5 1243 aa20.65■□□□□ 0.9
SPSB4-201ENST00000310546 EFCAB13Q8IY85 973 aa20.65■□□□□ 0.9
SPSB4-201ENST00000310546 MCTP2Q6DN12 878 aa20.65■□□□□ 0.9
SPSB4-201ENST00000310546 TADA2BQ86TJ2 420 aa20.65■□□□□ 0.9
SPSB4-201ENST00000310546 IFNL2Q8IZJ0 200 aa20.64■□□□□ 0.9
SPSB4-201ENST00000310546 MRPL44Q9H9J2 332 aaKnown RBP20.64■□□□□ 0.9
SPSB4-201ENST00000310546 COL16A1Q07092 1604 aaPredicted RBP20.64■□□□□ 0.9
SPSB4-201ENST00000310546 PFKFB1P16118 471 aa20.64■□□□□ 0.89
SPSB4-201ENST00000310546 MTF1Q14872 753 aa20.64■□□□□ 0.89
SPSB4-201ENST00000310546 DNAJC21Q5F1R6 531 aaKnown RBP20.64■□□□□ 0.89
SPSB4-201ENST00000310546 CHST3Q7LGC8 479 aa20.64■□□□□ 0.89
SPSB4-201ENST00000310546 KCNG4Q8TDN1 519 aa20.64■□□□□ 0.89
SPSB4-201ENST00000310546 STX10O60499 249 aa20.64■□□□□ 0.89
SPSB4-201ENST00000310546 VSNL1P62760 191 aa20.64■□□□□ 0.89
SPSB4-201ENST00000310546 USPL1Q5W0Q7 1092 aa20.64■□□□□ 0.89
SPSB4-201ENST00000310546 ZNF790Q6PG37 636 aa20.64■□□□□ 0.89
SPSB4-201ENST00000310546 MARCKSP29966 332 aaPredicted RBP20.63■□□□□ 0.89
SPSB4-201ENST00000310546 CABP4P57796 275 aa20.63■□□□□ 0.89
SPSB4-201ENST00000310546 TTLL5Q6EMB2 1281 aa20.63■□□□□ 0.89
SPSB4-201ENST00000310546 FAM71BQ8TC56 605 aa20.63■□□□□ 0.89
SPSB4-201ENST00000310546 INTS13Q9NVM9 706 aa20.63■□□□□ 0.89
SPSB4-201ENST00000310546 COL15A1P39059 1388 aa20.63■□□□□ 0.89
SPSB4-201ENST00000310546 SUGP1Q8IWZ8 645 aaKnown RBP20.63■□□□□ 0.89
SPSB4-201ENST00000310546 PPFIA4O75335 1185 aa20.62■□□□□ 0.89
SPSB4-201ENST00000310546 USP5P45974 858 aa20.62■□□□□ 0.89
SPSB4-201ENST00000310546 CWF19L2Q2TBE0 894 aaKnown RBP20.62■□□□□ 0.89
SPSB4-201ENST00000310546 STOX1Q6ZVD7 989 aa20.62■□□□□ 0.89
SPSB4-201ENST00000310546 CXorf56Q9H5V9 222 aa20.62■□□□□ 0.89
SPSB4-201ENST00000310546 GOLGB1Q14789 3259 aaKnown RBP20.62■□□□□ 0.89
SPSB4-201ENST00000310546 PNOCQ13519 176 aa20.62■□□□□ 0.89
SPSB4-201ENST00000310546 TC2NQ8N9U0 490 aa20.62■□□□□ 0.89
SPSB4-201ENST00000310546 SLC52A2Q9HAB3 445 aa20.62■□□□□ 0.89
SPSB4-201ENST00000310546 MNAT1P51948 309 aa20.61■□□□□ 0.89
SPSB4-201ENST00000310546 KLHDC4Q8TBB5 520 aa20.61■□□□□ 0.89
SPSB4-201ENST00000310546 RAB21Q9UL25 225 aa20.61■□□□□ 0.89
SPSB4-201ENST00000310546 A0A0U1RQJ8 604 aa20.61■□□□□ 0.89
SPSB4-201ENST00000310546 HOXB7P09629 217 aa20.61■□□□□ 0.89
SPSB4-201ENST00000310546 LIG3P49916 1009 aa20.61■□□□□ 0.89
SPSB4-201ENST00000310546 KIF4BQ2VIQ3 1234 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms