RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 FBXW7Q969H0 707 aa13.48□□□□□ -0.25
CTDSPL-202ENST00000310189 GPR101Q96P66 508 aaPredicted RBP13.48□□□□□ -0.25
CTDSPL-202ENST00000310189 COL1A1P02452 1464 aaPredicted RBP13.47□□□□□ -0.25
CTDSPL-202ENST00000310189 MAST2Q6P0Q8 1798 aa13.47□□□□□ -0.25
CTDSPL-202ENST00000310189 SLC3A2P08195 630 aaKnown RBP13.47□□□□□ -0.25
CTDSPL-202ENST00000310189 CPA1P15085 419 aa13.47□□□□□ -0.25
CTDSPL-202ENST00000310189 PRDX5P30044 214 aa13.47□□□□□ -0.25
CTDSPL-202ENST00000310189 HAND2P61296 217 aa13.47□□□□□ -0.25
CTDSPL-202ENST00000310189 TTLL5Q6EMB2 1281 aa13.47□□□□□ -0.25
CTDSPL-202ENST00000310189 LCORLQ8N3X6 602 aa13.47□□□□□ -0.25
CTDSPL-202ENST00000310189 KRT23Q9C075 422 aa13.47□□□□□ -0.25
CTDSPL-202ENST00000310189 SUGT1Q9Y2Z0 365 aa13.47□□□□□ -0.25
CTDSPL-202ENST00000310189 SLX4Q8IY92 1834 aa13.47□□□□□ -0.25
CTDSPL-202ENST00000310189 PDIA4P13667 645 aaKnown RBP13.46□□□□□ -0.25
CTDSPL-202ENST00000310189 PLCG2P16885 1265 aa13.46□□□□□ -0.25
CTDSPL-202ENST00000310189 MFSD14BQ5SR56 506 aa13.46□□□□□ -0.25
CTDSPL-202ENST00000310189 MFSD6Q6ZSS7 791 aa13.46□□□□□ -0.25
CTDSPL-202ENST00000310189 Q6ZUG5 572 aa13.46□□□□□ -0.25
CTDSPL-202ENST00000310189 PODNQ7Z5L7 613 aa13.46□□□□□ -0.25
CTDSPL-202ENST00000310189 RTKN2Q8IZC4 609 aa13.46□□□□□ -0.25
CTDSPL-202ENST00000310189 RNF39Q9H2S5 420 aa13.46□□□□□ -0.25
CTDSPL-202ENST00000310189 ATP8A2Q9NTI2 1148 aa13.46□□□□□ -0.25
CTDSPL-202ENST00000310189 SMC3Q9UQE7 1217 aa13.46□□□□□ -0.25
CTDSPL-202ENST00000310189 FAM205AQ6ZU69 1335 aa13.46□□□□□ -0.25
CTDSPL-202ENST00000310189 GSG1L2A8MUP6 293 aa13.45□□□□□ -0.26
CTDSPL-202ENST00000310189 GTF2IP78347 998 aa13.45□□□□□ -0.26
CTDSPL-202ENST00000310189 SART3Q15020 963 aaKnown RBP13.45□□□□□ -0.26
CTDSPL-202ENST00000310189 GBP4Q96PP9 640 aa13.45□□□□□ -0.26
CTDSPL-202ENST00000310189 TOMM22Q9NS69 142 aa13.45□□□□□ -0.26
CTDSPL-202ENST00000310189 JAG2Q9Y219 1238 aa13.45□□□□□ -0.26
CTDSPL-202ENST00000310189 WDR19Q8NEZ3 1342 aa13.45□□□□□ -0.26
CTDSPL-202ENST00000310189 USP5P45974 858 aa13.44□□□□□ -0.26
CTDSPL-202ENST00000310189 RIOK1Q9BRS2 568 aaKnown RBP13.44□□□□□ -0.26
CTDSPL-202ENST00000310189 AATFQ9NY61 560 aaKnown RBP eCLIP13.44□□□□□ -0.26
CTDSPL-202ENST00000310189 NAP1L2Q9ULW6 460 aaPredicted RBP13.44□□□□□ -0.26
CTDSPL-202ENST00000310189 KIF3AQ9Y496 699 aa13.44□□□□□ -0.26
CTDSPL-202ENST00000310189 LTBP1Q14766 1721 aa13.44□□□□□ -0.26
CTDSPL-202ENST00000310189 ERICH2A1L162 156 aa13.43□□□□□ -0.26
CTDSPL-202ENST00000310189 GOLGA6L22H0YM25 854 aa13.43□□□□□ -0.26
CTDSPL-202ENST00000310189 FOXP2O15409 715 aa13.43□□□□□ -0.26
CTDSPL-202ENST00000310189 PRC1O43663 620 aa13.43□□□□□ -0.26
CTDSPL-202ENST00000310189 PCP11498 1178 aaKnown RBP13.43□□□□□ -0.26
CTDSPL-202ENST00000310189 PTMSP20962 102 aa13.43□□□□□ -0.26
CTDSPL-202ENST00000310189 DYNLL1P63167 89 aaKnown RBP13.43□□□□□ -0.26
CTDSPL-202ENST00000310189 CACNB1Q02641 598 aaPredicted RBP13.43□□□□□ -0.26
CTDSPL-202ENST00000310189 DOK7Q18PE1 504 aa13.43□□□□□ -0.26
CTDSPL-202ENST00000310189 AKNAD1Q5T1N1 836 aa13.43□□□□□ -0.26
CTDSPL-202ENST00000310189 RTFDC1Q9BY42 306 aaPredicted RBP13.43□□□□□ -0.26
CTDSPL-202ENST00000310189 BRCA1P38398 1863 aaKnown RBP13.43□□□□□ -0.26
CTDSPL-202ENST00000310189 SNED1Q8TER0 1413 aa13.43□□□□□ -0.26
CTDSPL-202ENST00000310189 MROH7-TTC4A0A0A0MT08 1334 aa13.43□□□□□ -0.26
CTDSPL-202ENST00000310189 MINDY4BA8MYZ0 360 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 PRKAB2O43741 272 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 DHX16O60231 1041 aaKnown RBP13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 EXOSC10Q01780 885 aaKnown RBP13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 NBR1Q14596 966 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 STOX1Q6ZVD7 989 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 ADGRA1Q86SQ6 560 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 CCDC83Q8IWF9 413 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 BRF1Q92994 677 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 TMEM87BQ96K49 555 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 TCEANC2Q96MN5 208 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 PSMD1Q99460 953 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 ANP32EQ9BTT0 268 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 ARPP21Q9UBL0 812 aaPredicted RBP13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 TAF6LQ9Y6J9 622 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 LAMA4Q16363 1823 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 PDCP20941 246 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 DDIT3P35638 169 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 NT5C2P49902 561 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 PPP4CP60510 307 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 PPARAQ07869 468 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 TOB2Q14106 344 aaPredicted RBP13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 SYNE3Q6ZMZ3 975 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 SDR42E1Q8WUS8 393 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 LARP6Q9BRS8 491 aaKnown RBP13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 VPS33BQ9H267 617 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 TAOK3Q9H2K8 898 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 ZNF287Q9HBT7 754 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 EPB41L4AQ9HCS5 686 aaPredicted RBP13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 ANAPC4Q9UJX5 808 aa13.42□□□□□ -0.26
CTDSPL-202ENST00000310189 PPIP5K2O43314 1243 aa13.41□□□□□ -0.26
CTDSPL-202ENST00000310189 FKBP1AP62942 108 aaKnown RBP13.41□□□□□ -0.26
CTDSPL-202ENST00000310189 PDE4BQ07343 736 aa13.41□□□□□ -0.26
CTDSPL-202ENST00000310189 RAB3GAP1Q15042 981 aa13.41□□□□□ -0.26
CTDSPL-202ENST00000310189 NFKBIBQ15653 356 aa13.41□□□□□ -0.26
CTDSPL-202ENST00000310189 ME3Q16798 604 aa13.41□□□□□ -0.26
CTDSPL-202ENST00000310189 FBXL16Q8N461 479 aa13.41□□□□□ -0.26
CTDSPL-202ENST00000310189 STAG1Q8WVM7 1258 aa13.41□□□□□ -0.26
CTDSPL-202ENST00000310189 ESR2Q92731 530 aa13.41□□□□□ -0.26
CTDSPL-202ENST00000310189 ZNF274Q96GC6 653 aaPredicted RBP13.41□□□□□ -0.26
CTDSPL-202ENST00000310189 FAM163AQ96GL9 167 aaPredicted RBP13.41□□□□□ -0.26
CTDSPL-202ENST00000310189 TPCN1Q9ULQ1 816 aa13.41□□□□□ -0.26
CTDSPL-202ENST00000310189 WDR33Q9C0J8 1336 aaKnown RBP13.4□□□□□ -0.26
CTDSPL-202ENST00000310189 ECE2O60344 883 aa13.4□□□□□ -0.26
CTDSPL-202ENST00000310189 BTDP43251 543 aa13.4□□□□□ -0.26
CTDSPL-202ENST00000310189 CTDSPL2Q05D32 466 aa13.4□□□□□ -0.26
CTDSPL-202ENST00000310189 KIAA2012Q0VF49 1180 aa13.4□□□□□ -0.26
CTDSPL-202ENST00000310189 STK3Q13188 491 aa13.4□□□□□ -0.26
CTDSPL-202ENST00000310189 AOC3Q16853 763 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms