RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 TRIM27P14373 513 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 TUBB2AQ13885 445 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 GPR162Q16538 588 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 CNNM4Q6P4Q7 775 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 NLRX1Q86UT6 975 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 ANKRD44Q8N8A2 993 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 METTL22Q9BUU2 404 aaPredicted RBP3.59□□□□□ -1.83
CLOCK-201ENST00000309964 TUBB2BQ9BVA1 445 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 MAP2P11137 1827 aaKnown RBP3.59□□□□□ -1.83
CLOCK-201ENST00000309964 KIAA0232Q92628 1395 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 NCAPD2Q15021 1401 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 TYW5A2RUC4 315 aaKnown RBP3.59□□□□□ -1.83
CLOCK-201ENST00000309964 DEXIO95424 95 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 ALDH3A1P30838 453 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 KRT2P35908 639 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 USP14P54578 494 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 MRPS9P82933 396 aaKnown RBP3.59□□□□□ -1.83
CLOCK-201ENST00000309964 E2F5Q15329 346 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 PTPN14Q15678 1187 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 RRAGBQ5VZM2 374 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 RTKN2Q8IZC4 609 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 HAUS1Q96CS2 278 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 HOXD10P28358 340 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 CEBPZQ03701 1054 aaKnown RBP3.59□□□□□ -1.83
CLOCK-201ENST00000309964 CLEC4GQ6UXB4 293 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 CCDC110Q8TBZ0 833 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 NUP58Q9BVL2 599 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 TSPYL1Q9H0U9 437 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 USP16Q9Y5T5 823 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 ZNF189O75820 626 aaPredicted RBP3.59□□□□□ -1.83
CLOCK-201ENST00000309964 IDEP14735 1019 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 ATP5DP30049 168 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 KIF5AQ12840 1032 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 AFAP1L2Q8N4X5 818 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 GPR161Q8N6U8 529 aaKnown RBP3.59□□□□□ -1.83
CLOCK-201ENST00000309964 GIMAP8Q8ND71 665 aaPredicted RBP3.59□□□□□ -1.83
CLOCK-201ENST00000309964 XAGE3Q8WTP9 111 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 UBA5Q9GZZ9 404 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 ATG3Q9NT62 314 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 CDC42BPBQ9Y5S2 1711 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 APBA3O96018 575 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 LMBR1LQ6UX01 489 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 DHX32Q7L7V1 743 aaKnown RBP3.59□□□□□ -1.83
CLOCK-201ENST00000309964 SPATA24Q86W54 205 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 MICU3Q86XE3 530 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 NCAPGQ9BPX3 1015 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 BACH2Q9BYV9 841 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 SLC52A2Q9HAB3 445 aa3.59□□□□□ -1.83
CLOCK-201ENST00000309964 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.59□□□□□ -1.84
CLOCK-201ENST00000309964 hCG_1984214I3L0E3 225 aa3.59□□□□□ -1.84
CLOCK-201ENST00000309964 BACH1O14867 736 aa3.59□□□□□ -1.84
CLOCK-201ENST00000309964 FAM13AO94988 1023 aa3.59□□□□□ -1.84
CLOCK-201ENST00000309964 SLC1A4P43007 532 aa3.59□□□□□ -1.84
CLOCK-201ENST00000309964 SYKP43405 635 aa3.59□□□□□ -1.84
CLOCK-201ENST00000309964 ATP8B2P98198 1209 aa3.59□□□□□ -1.84
CLOCK-201ENST00000309964 IFFO1Q0D2I5 559 aa3.59□□□□□ -1.84
CLOCK-201ENST00000309964 STK3Q13188 491 aa3.59□□□□□ -1.84
CLOCK-201ENST00000309964 TEX11Q8IYF3 940 aa3.59□□□□□ -1.84
CLOCK-201ENST00000309964 APPBP2Q92624 585 aa3.59□□□□□ -1.84
CLOCK-201ENST00000309964 TBC1D31Q96DN5 1066 aa3.59□□□□□ -1.84
CLOCK-201ENST00000309964 PALM3A6NDB9 673 aaPredicted RBP3.59□□□□□ -1.84
CLOCK-201ENST00000309964 ERCC6LQ2NKX8 1250 aa3.59□□□□□ -1.84
CLOCK-201ENST00000309964 SLFN12Q8IYM2 578 aa3.59□□□□□ -1.84
CLOCK-201ENST00000309964 IFT122Q9HBG6 1241 aa3.59□□□□□ -1.84
CLOCK-201ENST00000309964 CDK12Q9NYV4 1490 aaPredicted RBP3.59□□□□□ -1.84
CLOCK-201ENST00000309964 GNAT1P11488 350 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 MAIP1Q8WWC4 291 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 ADPGKQ9BRR6 497 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.58□□□□□ -1.84
CLOCK-201ENST00000309964 CHPF2Q9P2E5 772 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.58□□□□□ -1.84
CLOCK-201ENST00000309964 POLR1AO95602 1720 aaPredicted RBP3.58□□□□□ -1.84
CLOCK-201ENST00000309964 KRT10P13645 584 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 VSIG10Q8N0Z9 540 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 EMILIN1Q9Y6C2 1016 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 DISP1Q96F81 1524 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 AATKQ6ZMQ8 1374 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 RNMTO43148 476 aaKnown RBP3.58□□□□□ -1.84
CLOCK-201ENST00000309964 EPB41P11171 864 aaKnown RBP3.58□□□□□ -1.84
CLOCK-201ENST00000309964 ATF7P17544 494 aaPredicted RBP3.58□□□□□ -1.84
CLOCK-201ENST00000309964 TMCO3Q6UWJ1 677 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 TAX1BP1Q86VP1 789 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 GSDMBQ8TAX9 411 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 TRIM47Q96LD4 638 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 MAK16Q9BXY0 300 aaKnown RBP3.58□□□□□ -1.84
CLOCK-201ENST00000309964 CEP152O94986 1710 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.58□□□□□ -1.84
CLOCK-201ENST00000309964 CASQ1P31415 396 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 ARMC9Q7Z3E5 817 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 ZC3H15Q8WU90 426 aaKnown RBP3.58□□□□□ -1.84
CLOCK-201ENST00000309964 PPP2R3CQ969Q6 453 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 ALG1Q9BT22 464 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 MAGEF1Q9HAY2 307 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 ZRANB1Q9UGI0 708 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 IQGAP3Q86VI3 1631 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 ZNF233A6NK53 670 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 LAD1O00515 517 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 CALUO43852 315 aaPredicted RBP3.58□□□□□ -1.84
CLOCK-201ENST00000309964 HOXC6P09630 235 aa3.58□□□□□ -1.84
CLOCK-201ENST00000309964 CFAP57Q96MR6 1250 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms