RNA–Protein interactions for RNA: ENST00000309862.10

PGAP3-202, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2

Gene PGAP3, Length 3,028 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-202ENST00000309862 OLFM4Q6UX06 510 aa17.8■□□□□ 0.44
PGAP3-202ENST00000309862 TOGARAM2Q6ZUX3 1019 aa17.8■□□□□ 0.44
PGAP3-202ENST00000309862 METTL16Q86W50 562 aaKnown RBP17.8■□□□□ 0.44
PGAP3-202ENST00000309862 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.8■□□□□ 0.44
PGAP3-202ENST00000309862 CALCOCO1Q9P1Z2 691 aa17.8■□□□□ 0.44
PGAP3-202ENST00000309862 CEP126Q9P2H0 1117 aa17.8■□□□□ 0.44
PGAP3-202ENST00000309862 TUBE1Q9UJT0 475 aa17.8■□□□□ 0.44
PGAP3-202ENST00000309862 BMP6P22004 513 aa17.79■□□□□ 0.44
PGAP3-202ENST00000309862 KARSQ15046 597 aaKnown RBP17.79■□□□□ 0.44
PGAP3-202ENST00000309862 TRMT44Q8IYL2 757 aaKnown RBP17.79■□□□□ 0.44
PGAP3-202ENST00000309862 CNNM3Q8NE01 707 aa17.79■□□□□ 0.44
PGAP3-202ENST00000309862 CWC25Q9NXE8 425 aaPredicted RBP17.79■□□□□ 0.44
PGAP3-202ENST00000309862 CBFA2T2O43439 604 aa17.79■□□□□ 0.44
PGAP3-202ENST00000309862 A1BGP04217 495 aa17.79■□□□□ 0.44
PGAP3-202ENST00000309862 CDK11BP21127 795 aaKnown RBP17.79■□□□□ 0.44
PGAP3-202ENST00000309862 CHMP4CQ96CF2 233 aa17.79■□□□□ 0.44
PGAP3-202ENST00000309862 CYP27B1O15528 508 aa17.78■□□□□ 0.44
PGAP3-202ENST00000309862 CCP110O43303 1012 aa17.78■□□□□ 0.44
PGAP3-202ENST00000309862 CASQ1P31415 396 aa17.78■□□□□ 0.44
PGAP3-202ENST00000309862 CABP4P57796 275 aa17.78■□□□□ 0.44
PGAP3-202ENST00000309862 IFNL2Q8IZJ0 200 aa17.78■□□□□ 0.44
PGAP3-202ENST00000309862 IRX2Q9BZI1 471 aaPredicted RBP17.78■□□□□ 0.44
PGAP3-202ENST00000309862 INCENPQ9NQS7 918 aa17.78■□□□□ 0.44
PGAP3-202ENST00000309862 USP54Q70EL1 1684 aa17.78■□□□□ 0.44
PGAP3-202ENST00000309862 EFCAB8A8MWE9 144 aa17.78■□□□□ 0.44
PGAP3-202ENST00000309862 APPP05067 770 aa17.78■□□□□ 0.44
PGAP3-202ENST00000309862 CCDC158Q5M9N0 1113 aa17.78■□□□□ 0.44
PGAP3-202ENST00000309862 TMEM139Q8IV31 216 aa17.78■□□□□ 0.44
PGAP3-202ENST00000309862 XAGE2Q96GT9 111 aa17.78■□□□□ 0.44
PGAP3-202ENST00000309862 BAG1Q99933 345 aaPredicted RBP17.78■□□□□ 0.44
PGAP3-202ENST00000309862 GPAA1O43292 621 aa17.77■□□□□ 0.44
PGAP3-202ENST00000309862 ZSCAN12O43309 604 aa17.77■□□□□ 0.44
PGAP3-202ENST00000309862 TBC1D8O95759 1140 aa17.77■□□□□ 0.44
PGAP3-202ENST00000309862 OAS2P29728 719 aaKnown RBP17.77■□□□□ 0.44
PGAP3-202ENST00000309862 METAP2P50579 478 aaKnown RBP eCLIP17.77■□□□□ 0.44
PGAP3-202ENST00000309862 KRT28Q7Z3Y7 464 aa17.77■□□□□ 0.44
PGAP3-202ENST00000309862 SMARCE1Q969G3 411 aa17.77■□□□□ 0.44
PGAP3-202ENST00000309862 HPSEQ9Y251 543 aa17.77■□□□□ 0.44
PGAP3-202ENST00000309862 PTPAQ15257 358 aa17.77■□□□□ 0.43
PGAP3-202ENST00000309862 CHRNA2Q15822 529 aa17.77■□□□□ 0.43
PGAP3-202ENST00000309862 CYB5R4Q7L1T6 521 aa17.77■□□□□ 0.43
PGAP3-202ENST00000309862 GRAMD1CQ8IYS0 662 aa17.77■□□□□ 0.43
PGAP3-202ENST00000309862 KCNH3Q9ULD8 1083 aa17.77■□□□□ 0.43
PGAP3-202ENST00000309862 TUBB4AP04350 444 aa17.76■□□□□ 0.43
PGAP3-202ENST00000309862 CAPN2P17655 700 aa17.76■□□□□ 0.43
PGAP3-202ENST00000309862 PPP2R3AQ06190 1150 aa17.76■□□□□ 0.43
PGAP3-202ENST00000309862 MTF1Q14872 753 aa17.76■□□□□ 0.43
PGAP3-202ENST00000309862 CCDC102BQ68D86 513 aa17.76■□□□□ 0.43
PGAP3-202ENST00000309862 CABLES1Q8TDN4 633 aa17.76■□□□□ 0.43
PGAP3-202ENST00000309862 AFDNP55196 1824 aaKnown RBP17.76■□□□□ 0.43
PGAP3-202ENST00000309862 ARHGAP6O43182 974 aa17.76■□□□□ 0.43
PGAP3-202ENST00000309862 ATP2B1P20020 1258 aa17.76■□□□□ 0.43
PGAP3-202ENST00000309862 GRIN1Q05586 938 aa17.76■□□□□ 0.43
PGAP3-202ENST00000309862 CC2D1AQ6P1N0 951 aaPredicted RBP17.76■□□□□ 0.43
PGAP3-202ENST00000309862 DDX17Q92841 729 aaKnown RBP17.76■□□□□ 0.43
PGAP3-202ENST00000309862 GPR108Q9NPR9 543 aa17.76■□□□□ 0.43
PGAP3-202ENST00000309862 FMR1Q06787 632 aaKnown RBP eCLIP17.75■□□□□ 0.43
PGAP3-202ENST00000309862 TRDNQ13061 729 aa17.75■□□□□ 0.43
PGAP3-202ENST00000309862 CCDC82Q8N4S0 544 aa17.75■□□□□ 0.43
PGAP3-202ENST00000309862 DHX58Q96C10 678 aa17.75■□□□□ 0.43
PGAP3-202ENST00000309862 SRRTQ9BXP5 876 aaKnown RBP17.75■□□□□ 0.43
PGAP3-202ENST00000309862 B4E1Z4 1266 aa17.75■□□□□ 0.43
PGAP3-202ENST00000309862 SMC1AQ14683 1233 aaKnown RBP17.75■□□□□ 0.43
PGAP3-202ENST00000309862 KRBA2Q6ZNG9 492 aa17.75■□□□□ 0.43
PGAP3-202ENST00000309862 TBC1D10CQ8IV04 446 aa17.75■□□□□ 0.43
PGAP3-202ENST00000309862 FBXL16Q8N461 479 aa17.75■□□□□ 0.43
PGAP3-202ENST00000309862 PARD6BQ9BYG5 372 aa17.75■□□□□ 0.43
PGAP3-202ENST00000309862 NFE2L3Q9Y4A8 694 aa17.75■□□□□ 0.43
PGAP3-202ENST00000309862 DHX8Q14562 1220 aaKnown RBP17.74■□□□□ 0.43
PGAP3-202ENST00000309862 JMYQ8N9B5 988 aa17.74■□□□□ 0.43
PGAP3-202ENST00000309862 NBPF3Q9H094 633 aa17.74■□□□□ 0.43
PGAP3-202ENST00000309862 SIPA1L3O60292 1781 aaPredicted RBP17.74■□□□□ 0.43
PGAP3-202ENST00000309862 A0A0U1RQJ8 604 aa17.74■□□□□ 0.43
PGAP3-202ENST00000309862 CCDC57Q2TAC2 916 aa17.74■□□□□ 0.43
PGAP3-202ENST00000309862 RESP18Q5W5W9 173 aa17.74■□□□□ 0.43
PGAP3-202ENST00000309862 NFXL1Q6ZNB6 911 aa17.74■□□□□ 0.43
PGAP3-202ENST00000309862 ATRIPQ8WXE1 791 aa17.74■□□□□ 0.43
PGAP3-202ENST00000309862 MAP3K14Q99558 947 aa17.74■□□□□ 0.43
PGAP3-202ENST00000309862 ANGEL1Q9UNK9 670 aaKnown RBP17.74■□□□□ 0.43
PGAP3-202ENST00000309862 PRR29P0C7W0 189 aa17.74■□□□□ 0.43
PGAP3-202ENST00000309862 MAP3K9P80192 1104 aa17.74■□□□□ 0.43
PGAP3-202ENST00000309862 TC2NQ8N9U0 490 aa17.74■□□□□ 0.43
PGAP3-202ENST00000309862 CPLX3Q8WVH0 158 aa17.74■□□□□ 0.43
PGAP3-202ENST00000309862 APPBP2Q92624 585 aa17.74■□□□□ 0.43
PGAP3-202ENST00000309862 C19orf44Q9H6X5 657 aa17.74■□□□□ 0.43
PGAP3-202ENST00000309862 LZTFL1Q9NQ48 299 aa17.74■□□□□ 0.43
PGAP3-202ENST00000309862 TRHP20396 242 aaPredicted RBP17.73■□□□□ 0.43
PGAP3-202ENST00000309862 CCDC12Q8WUD4 166 aaPredicted RBP17.73■□□□□ 0.43
PGAP3-202ENST00000309862 DCAF5Q96JK2 942 aa17.73■□□□□ 0.43
PGAP3-202ENST00000309862 MPHOSPH8Q99549 860 aa17.73■□□□□ 0.43
PGAP3-202ENST00000309862 SAMSN1Q9NSI8 373 aaKnown RBP17.73■□□□□ 0.43
PGAP3-202ENST00000309862 ZFP91Q96JP5 570 aaPredicted RBP17.73■□□□□ 0.43
PGAP3-202ENST00000309862 PPP6R2O75170 966 aa17.72■□□□□ 0.43
PGAP3-202ENST00000309862 TAF7LQ5H9L4 462 aa17.72■□□□□ 0.43
PGAP3-202ENST00000309862 SLC26A6Q9BXS9 759 aa17.72■□□□□ 0.43
PGAP3-202ENST00000309862 ARFGAP3Q9NP61 516 aa17.72■□□□□ 0.43
PGAP3-202ENST00000309862 MEGF6O75095 1541 aa17.72■□□□□ 0.43
PGAP3-202ENST00000309862 ZMYM6O95789 1325 aa17.72■□□□□ 0.43
PGAP3-202ENST00000309862 POLR2DO15514 142 aaKnown RBP17.72■□□□□ 0.43
PGAP3-202ENST00000309862 IARSP41252 1262 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms