RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 KLRG2A4D1S0 409 aaPredicted RBP13.12□□□□□ -0.31
TRIM59-201ENST00000309784 GSG1L2A8MUP6 293 aa13.12□□□□□ -0.31
TRIM59-201ENST00000309784 SART3Q15020 963 aaKnown RBP13.12□□□□□ -0.31
TRIM59-201ENST00000309784 ZKSCAN3Q9BRR0 538 aa13.12□□□□□ -0.31
TRIM59-201ENST00000309784 TTF2Q9UNY4 1162 aaKnown RBP13.12□□□□□ -0.31
TRIM59-201ENST00000309784 IFIT3O14879 490 aaKnown RBP13.12□□□□□ -0.31
TRIM59-201ENST00000309784 PICALMQ13492 652 aa13.12□□□□□ -0.31
TRIM59-201ENST00000309784 AOC3Q16853 763 aa13.12□□□□□ -0.31
TRIM59-201ENST00000309784 SYNE3Q6ZMZ3 975 aa13.12□□□□□ -0.31
TRIM59-201ENST00000309784 PODXL2Q9NZ53 605 aa13.12□□□□□ -0.31
TRIM59-201ENST00000309784 USP17L12C9JPN9 530 aa13.11□□□□□ -0.31
TRIM59-201ENST00000309784 USP17L21D6R901 530 aa13.11□□□□□ -0.31
TRIM59-201ENST00000309784 SLC3A2P08195 630 aaKnown RBP13.11□□□□□ -0.31
TRIM59-201ENST00000309784 KIAA0825Q8IV33 1275 aa13.11□□□□□ -0.31
TRIM59-201ENST00000309784 TGFBRAP1Q8WUH2 860 aa13.11□□□□□ -0.31
TRIM59-201ENST00000309784 TNPO1Q92973 898 aaKnown RBP13.11□□□□□ -0.31
TRIM59-201ENST00000309784 CHMP4CQ96CF2 233 aa13.11□□□□□ -0.31
TRIM59-201ENST00000309784 UBAC1Q9BSL1 405 aa13.11□□□□□ -0.31
TRIM59-201ENST00000309784 MXD3Q9BW11 206 aa13.11□□□□□ -0.31
TRIM59-201ENST00000309784 RNF41Q9H4P4 317 aaPredicted RBP13.11□□□□□ -0.31
TRIM59-201ENST00000309784 EPB41L4AQ9HCS5 686 aaPredicted RBP13.11□□□□□ -0.31
TRIM59-201ENST00000309784 GJB2P29033 226 aa13.11□□□□□ -0.31
TRIM59-201ENST00000309784 TBC1D10CQ8IV04 446 aa13.11□□□□□ -0.31
TRIM59-201ENST00000309784 LARGE2Q8N3Y3 721 aa13.11□□□□□ -0.31
TRIM59-201ENST00000309784 SAP30BPQ9UHR5 308 aaKnown RBP13.11□□□□□ -0.31
TRIM59-201ENST00000309784 KLF18A0A0U1RQI7 1052 aa13.11□□□□□ -0.31
TRIM59-201ENST00000309784 BTDP43251 543 aa13.11□□□□□ -0.31
TRIM59-201ENST00000309784 PKP1Q13835 747 aa13.11□□□□□ -0.31
TRIM59-201ENST00000309784 MAPKAPK5Q8IW41 473 aa13.11□□□□□ -0.31
TRIM59-201ENST00000309784 CCDC144CPQ8IYA2 1237 aa13.11□□□□□ -0.31
TRIM59-201ENST00000309784 GPHNQ9NQX3 736 aaPredicted RBP13.11□□□□□ -0.31
TRIM59-201ENST00000309784 MTMR7Q9Y216 660 aa13.11□□□□□ -0.31
TRIM59-201ENST00000309784 BCS1LQ9Y276 419 aa13.11□□□□□ -0.31
TRIM59-201ENST00000309784 GOLGA8BA8MQT2 603 aa13.1□□□□□ -0.31
TRIM59-201ENST00000309784 PPARAQ07869 468 aa13.1□□□□□ -0.31
TRIM59-201ENST00000309784 TMEM67Q5HYA8 995 aa13.1□□□□□ -0.31
TRIM59-201ENST00000309784 TEX11Q8IYF3 940 aa13.1□□□□□ -0.31
TRIM59-201ENST00000309784 KCNB2Q92953 911 aa13.1□□□□□ -0.31
TRIM59-201ENST00000309784 COL1A1P02452 1464 aaPredicted RBP13.1□□□□□ -0.31
TRIM59-201ENST00000309784 H3BQV1 296 aa13.1□□□□□ -0.31
TRIM59-201ENST00000309784 GRIK5Q16478 980 aa13.1□□□□□ -0.31
TRIM59-201ENST00000309784 TSGA10IPQ3SY00 556 aa13.1□□□□□ -0.31
TRIM59-201ENST00000309784 IFFO2Q5TF58 517 aa13.1□□□□□ -0.31
TRIM59-201ENST00000309784 CCDC69A6NI79 296 aa13.1□□□□□ -0.31
TRIM59-201ENST00000309784 RXRAP19793 462 aa13.1□□□□□ -0.31
TRIM59-201ENST00000309784 AKNAD1Q5T1N1 836 aa13.1□□□□□ -0.31
TRIM59-201ENST00000309784 MICU3Q86XE3 530 aa13.1□□□□□ -0.31
TRIM59-201ENST00000309784 NUP133Q8WUM0 1156 aa13.1□□□□□ -0.31
TRIM59-201ENST00000309784 TOB2Q14106 344 aaPredicted RBP13.09□□□□□ -0.31
TRIM59-201ENST00000309784 LARP1BQ659C4 914 aaKnown RBP13.09□□□□□ -0.31
TRIM59-201ENST00000309784 RPAP1Q9BWH6 1393 aaPredicted RBP13.09□□□□□ -0.31
TRIM59-201ENST00000309784 AKAP11Q9UKA4 1901 aa13.09□□□□□ -0.31
TRIM59-201ENST00000309784 CCDC93Q567U6 631 aa13.09□□□□□ -0.31
TRIM59-201ENST00000309784 MCTP1Q6DN14 999 aa13.09□□□□□ -0.31
TRIM59-201ENST00000309784 INTS4Q96HW7 963 aaKnown RBP13.09□□□□□ -0.31
TRIM59-201ENST00000309784 KRT23Q9C075 422 aa13.09□□□□□ -0.31
TRIM59-201ENST00000309784 MTFR1LQ9H019 292 aa13.09□□□□□ -0.31
TRIM59-201ENST00000309784 CNNM2Q9H8M5 875 aa13.09□□□□□ -0.31
TRIM59-201ENST00000309784 MKNK2Q9HBH9 465 aa13.09□□□□□ -0.31
TRIM59-201ENST00000309784 TNS1Q9HBL0 1735 aaKnown RBP13.09□□□□□ -0.31
TRIM59-201ENST00000309784 NCOA5Q9HCD5 579 aaKnown RBP13.09□□□□□ -0.31
TRIM59-201ENST00000309784 SH3RF3Q8TEJ3 882 aaPredicted RBP13.09□□□□□ -0.31
TRIM59-201ENST00000309784 FOXP2O15409 715 aa13.08□□□□□ -0.32
TRIM59-201ENST00000309784 ECE2O60344 883 aa13.08□□□□□ -0.32
TRIM59-201ENST00000309784 SUPT20HQ8NEM7 779 aa13.08□□□□□ -0.32
TRIM59-201ENST00000309784 IL27Q8NEV9 243 aa13.08□□□□□ -0.32
TRIM59-201ENST00000309784 PIM2Q9P1W9 311 aa13.08□□□□□ -0.32
TRIM59-201ENST00000309784 ZSCAN29Q8IWY8 852 aaPredicted RBP13.08□□□□□ -0.32
TRIM59-201ENST00000309784 RIOK1Q9BRS2 568 aaKnown RBP13.08□□□□□ -0.32
TRIM59-201ENST00000309784 GZF1Q9H116 711 aaPredicted RBP13.08□□□□□ -0.32
TRIM59-201ENST00000309784 ZNF277Q9NRM2 450 aaPredicted RBP13.08□□□□□ -0.32
TRIM59-201ENST00000309784 NEDD4P46934 1319 aa13.08□□□□□ -0.32
TRIM59-201ENST00000309784 IL1R1P14778 569 aa13.08□□□□□ -0.32
TRIM59-201ENST00000309784 CPLX2Q6PUV4 134 aaKnown RBP13.08□□□□□ -0.32
TRIM59-201ENST00000309784 ESR2Q92731 530 aa13.08□□□□□ -0.32
TRIM59-201ENST00000309784 TSPY2A6NKD2 308 aa13.07□□□□□ -0.32
TRIM59-201ENST00000309784 CUL4AQ13619 759 aa13.07□□□□□ -0.32
TRIM59-201ENST00000309784 FERMT3Q86UX7 667 aa13.07□□□□□ -0.32
TRIM59-201ENST00000309784 CCDC82Q8N4S0 544 aa13.07□□□□□ -0.32
TRIM59-201ENST00000309784 USP17L8P0C7I0 530 aa13.07□□□□□ -0.32
TRIM59-201ENST00000309784 PDE4BQ07343 736 aa13.07□□□□□ -0.32
TRIM59-201ENST00000309784 KCNQ5Q9NR82 932 aa13.07□□□□□ -0.32
TRIM59-201ENST00000309784 ISY1Q9ULR0 285 aaKnown RBP13.07□□□□□ -0.32
TRIM59-201ENST00000309784 KIF3AQ9Y496 699 aa13.07□□□□□ -0.32
TRIM59-201ENST00000309784 MYO5AQ9Y4I1 1855 aaKnown RBP13.07□□□□□ -0.32
TRIM59-201ENST00000309784 CYP2D6P10635 497 aa13.07□□□□□ -0.32
TRIM59-201ENST00000309784 RAB3GAP1Q15042 981 aa13.07□□□□□ -0.32
TRIM59-201ENST00000309784 CC2D2BQ6DHV5 1058 aa13.07□□□□□ -0.32
TRIM59-201ENST00000309784 PODNQ7Z5L7 613 aa13.07□□□□□ -0.32
TRIM59-201ENST00000309784 IQCA1Q86XH1 822 aa13.07□□□□□ -0.32
TRIM59-201ENST00000309784 ZNF384Q8TF68 577 aa13.07□□□□□ -0.32
TRIM59-201ENST00000309784 MYL10Q9BUA6 226 aa13.07□□□□□ -0.32
TRIM59-201ENST00000309784 SLC12A7Q9Y666 1083 aa13.07□□□□□ -0.32
TRIM59-201ENST00000309784 WDR33Q9C0J8 1336 aaKnown RBP13.06□□□□□ -0.32
TRIM59-201ENST00000309784 RAD17O75943 681 aa13.06□□□□□ -0.32
TRIM59-201ENST00000309784 PLCG2P16885 1265 aa13.06□□□□□ -0.32
TRIM59-201ENST00000309784 MCM4P33991 863 aa13.06□□□□□ -0.32
TRIM59-201ENST00000309784 DALRD3Q5D0E6 543 aaKnown RBP13.06□□□□□ -0.32
TRIM59-201ENST00000309784 C15orf52Q6ZUT6 534 aaKnown RBP13.06□□□□□ -0.32
TRIM59-201ENST00000309784 DCP1AQ9NPI6 582 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms