RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 WDR17Q8IZU2 1322 aa14.55□□□□□ -0.08
RETREG3-201ENST00000309428 KCNQ2O43526 872 aa14.55□□□□□ -0.08
RETREG3-201ENST00000309428 DHX16O60231 1041 aaKnown RBP14.55□□□□□ -0.08
RETREG3-201ENST00000309428 NEMFO60524 1076 aa14.55□□□□□ -0.08
RETREG3-201ENST00000309428 CYP7A1P22680 504 aa14.55□□□□□ -0.08
RETREG3-201ENST00000309428 NDUFA8P51970 172 aa14.55□□□□□ -0.08
RETREG3-201ENST00000309428 DHX8Q14562 1220 aaKnown RBP14.55□□□□□ -0.08
RETREG3-201ENST00000309428 XPO4Q9C0E2 1151 aaKnown RBP14.55□□□□□ -0.08
RETREG3-201ENST00000309428 IARSP41252 1262 aaKnown RBP14.55□□□□□ -0.08
RETREG3-201ENST00000309428 AFMP43652 599 aa14.55□□□□□ -0.08
RETREG3-201ENST00000309428 PPFIBP1Q86W92 1011 aa14.55□□□□□ -0.08
RETREG3-201ENST00000309428 MRPS27Q92552 414 aaKnown RBP14.55□□□□□ -0.08
RETREG3-201ENST00000309428 RSPH14Q9UHP6 348 aa14.55□□□□□ -0.08
RETREG3-201ENST00000309428 H0YHG0 523 aa14.54□□□□□ -0.08
RETREG3-201ENST00000309428 KIF2AO00139 706 aaPredicted RBP14.54□□□□□ -0.08
RETREG3-201ENST00000309428 IGHMBP2P38935 993 aaKnown RBP14.54□□□□□ -0.08
RETREG3-201ENST00000309428 ZMYM1Q5SVZ6 1142 aa14.54□□□□□ -0.08
RETREG3-201ENST00000309428 UBAC1Q9BSL1 405 aa14.54□□□□□ -0.08
RETREG3-201ENST00000309428 ANKRD65E5RJM6 399 aa14.54□□□□□ -0.08
RETREG3-201ENST00000309428 RHOXF2BP0C7M4 288 aa14.54□□□□□ -0.08
RETREG3-201ENST00000309428 STX17P56962 302 aa14.54□□□□□ -0.08
RETREG3-201ENST00000309428 PLIN2Q99541 437 aa14.54□□□□□ -0.08
RETREG3-201ENST00000309428 RHOXF2Q9BQY4 288 aa14.54□□□□□ -0.08
RETREG3-201ENST00000309428 ZCCHC17Q9NP64 241 aaKnown RBP14.54□□□□□ -0.08
RETREG3-201ENST00000309428 ATG3Q9NT62 314 aa14.54□□□□□ -0.08
RETREG3-201ENST00000309428 PCDHA7Q9UN72 937 aa14.54□□□□□ -0.08
RETREG3-201ENST00000309428 CTAGE5O15320 804 aa14.54□□□□□ -0.08
RETREG3-201ENST00000309428 ZBTB43O43298 467 aa14.54□□□□□ -0.08
RETREG3-201ENST00000309428 CTDNEP1O95476 244 aa14.54□□□□□ -0.08
RETREG3-201ENST00000309428 GABPB1Q06547 395 aaPredicted RBP14.54□□□□□ -0.08
RETREG3-201ENST00000309428 IPO4Q8TEX9 1081 aaKnown RBP14.54□□□□□ -0.08
RETREG3-201ENST00000309428 SPTLC2O15270 562 aa14.53□□□□□ -0.08
RETREG3-201ENST00000309428 SAFBQ15424 915 aaKnown RBP eCLIP14.53□□□□□ -0.08
RETREG3-201ENST00000309428 JAKMIP3Q5VZ66 844 aa14.53□□□□□ -0.08
RETREG3-201ENST00000309428 GRAMD1CQ8IYS0 662 aa14.53□□□□□ -0.08
RETREG3-201ENST00000309428 ARFGAP3Q9NP61 516 aa14.53□□□□□ -0.08
RETREG3-201ENST00000309428 DNA2P51530 1060 aa14.53□□□□□ -0.08
RETREG3-201ENST00000309428 RESTQ13127 1097 aa14.53□□□□□ -0.08
RETREG3-201ENST00000309428 NOM1Q5C9Z4 860 aaKnown RBP14.53□□□□□ -0.08
RETREG3-201ENST00000309428 TRMT44Q8IYL2 757 aaKnown RBP14.53□□□□□ -0.08
RETREG3-201ENST00000309428 CNNM3Q8NE01 707 aa14.53□□□□□ -0.08
RETREG3-201ENST00000309428 C8orf37Q96NL8 207 aa14.53□□□□□ -0.08
RETREG3-201ENST00000309428 GPR101Q96P66 508 aaPredicted RBP14.53□□□□□ -0.08
RETREG3-201ENST00000309428 VPS18Q9P253 973 aa14.53□□□□□ -0.08
RETREG3-201ENST00000309428 NAP1L1P55209 391 aaKnown RBP14.53□□□□□ -0.08
RETREG3-201ENST00000309428 MAP3K12Q12852 859 aa14.53□□□□□ -0.08
RETREG3-201ENST00000309428 DDB1Q16531 1140 aa14.53□□□□□ -0.08
RETREG3-201ENST00000309428 FAM98CQ17RN3 349 aaKnown RBP14.53□□□□□ -0.08
RETREG3-201ENST00000309428 KMT5BQ4FZB7 885 aa14.53□□□□□ -0.08
RETREG3-201ENST00000309428 FKBP15Q5T1M5 1219 aa14.53□□□□□ -0.08
RETREG3-201ENST00000309428 NKX2-3Q8TAU0 364 aa14.53□□□□□ -0.08
RETREG3-201ENST00000309428 HINFPQ9BQA5 517 aa14.53□□□□□ -0.08
RETREG3-201ENST00000309428 HMGB1P09429 215 aaKnown RBP14.52□□□□□ -0.08
RETREG3-201ENST00000309428 CAPN2P17655 700 aa14.52□□□□□ -0.08
RETREG3-201ENST00000309428 TBC1D10CQ8IV04 446 aa14.52□□□□□ -0.08
RETREG3-201ENST00000309428 TTLL11Q8NHH1 800 aa14.52□□□□□ -0.08
RETREG3-201ENST00000309428 APPBP2Q92624 585 aa14.52□□□□□ -0.08
RETREG3-201ENST00000309428 RGPD2P0DJD1 1756 aa14.52□□□□□ -0.08
RETREG3-201ENST00000309428 PDE6AP16499 860 aa14.52□□□□□ -0.09
RETREG3-201ENST00000309428 DPCR1Q3MIW9 517 aa14.52□□□□□ -0.09
RETREG3-201ENST00000309428 NLRP10Q86W26 655 aa14.52□□□□□ -0.09
RETREG3-201ENST00000309428 GDAP1L1Q96MZ0 367 aa14.52□□□□□ -0.09
RETREG3-201ENST00000309428 ZNF219Q9P2Y4 722 aaPredicted RBP14.52□□□□□ -0.09
RETREG3-201ENST00000309428 HELLSQ9NRZ9 838 aa14.52□□□□□ -0.09
RETREG3-201ENST00000309428 CCP110O43303 1012 aa14.51□□□□□ -0.09
RETREG3-201ENST00000309428 IPO7O95373 1038 aaKnown RBP14.51□□□□□ -0.09
RETREG3-201ENST00000309428 ERCC3P19447 782 aa14.51□□□□□ -0.09
RETREG3-201ENST00000309428 CASP1P29466 404 aa14.51□□□□□ -0.09
RETREG3-201ENST00000309428 CTSWP56202 376 aa14.51□□□□□ -0.09
RETREG3-201ENST00000309428 MFSD6Q6ZSS7 791 aa14.51□□□□□ -0.09
RETREG3-201ENST00000309428 MAPK8IP1Q9UQF2 711 aa14.51□□□□□ -0.09
RETREG3-201ENST00000309428 AKAP12Q02952 1782 aa14.51□□□□□ -0.09
RETREG3-201ENST00000309428 SETD1AO15047 1707 aaKnown RBP14.51□□□□□ -0.09
RETREG3-201ENST00000309428 PNOCQ13519 176 aa14.51□□□□□ -0.09
RETREG3-201ENST00000309428 CYB5R4Q7L1T6 521 aa14.51□□□□□ -0.09
RETREG3-201ENST00000309428 DESI2Q9BSY9 194 aa14.51□□□□□ -0.09
RETREG3-201ENST00000309428 ZSCAN16Q9H4T2 348 aaPredicted RBP14.51□□□□□ -0.09
RETREG3-201ENST00000309428 HOOK1Q9UJC3 728 aaKnown RBP14.51□□□□□ -0.09
RETREG3-201ENST00000309428 ZSCAN12O43309 604 aa14.51□□□□□ -0.09
RETREG3-201ENST00000309428 SLC5A1P13866 664 aa14.51□□□□□ -0.09
RETREG3-201ENST00000309428 SYKP43405 635 aa14.51□□□□□ -0.09
RETREG3-201ENST00000309428 BTBD18B2RXH4 712 aa14.5□□□□□ -0.09
RETREG3-201ENST00000309428 PFKFB2O60825 505 aa14.5□□□□□ -0.09
RETREG3-201ENST00000309428 FAM47AQ5JRC9 791 aa14.5□□□□□ -0.09
RETREG3-201ENST00000309428 KIF28PB7ZC32 967 aa14.5□□□□□ -0.09
RETREG3-201ENST00000309428 ATP2B2Q01814 1243 aa14.5□□□□□ -0.09
RETREG3-201ENST00000309428 SUSD4Q5VX71 490 aa14.5□□□□□ -0.09
RETREG3-201ENST00000309428 ZBTB38Q8NAP3 1195 aaPredicted RBP14.5□□□□□ -0.09
RETREG3-201ENST00000309428 VAT1LQ9HCJ6 419 aa14.5□□□□□ -0.09
RETREG3-201ENST00000309428 SPTLC3Q9NUV7 552 aa14.5□□□□□ -0.09
RETREG3-201ENST00000309428 FAM170AA1A519 330 aa14.5□□□□□ -0.09
RETREG3-201ENST00000309428 CBFA2T2O43439 604 aa14.5□□□□□ -0.09
RETREG3-201ENST00000309428 NR5A1Q13285 461 aa14.5□□□□□ -0.09
RETREG3-201ENST00000309428 TERF2Q15554 542 aa14.5□□□□□ -0.09
RETREG3-201ENST00000309428 LONRF3Q496Y0 759 aa14.5□□□□□ -0.09
RETREG3-201ENST00000309428 KRT40Q6A162 431 aa14.5□□□□□ -0.09
RETREG3-201ENST00000309428 NGLY1Q96IV0 654 aa14.5□□□□□ -0.09
RETREG3-201ENST00000309428 CENPHQ9H3R5 247 aa14.5□□□□□ -0.09
RETREG3-201ENST00000309428 MED23Q9ULK4 1368 aa14.49□□□□□ -0.09
RETREG3-201ENST00000309428 OAS2P29728 719 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms