RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 CDK5RAP3Q96JB5 506 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 COQ10AQ96MF6 247 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 C17orf75Q9HAS0 396 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 ZCCHC17Q9NP64 241 aaKnown RBP1.55□□□□□ -2.16
CEP290-201ENST00000309041 ACSS2Q9NR19 701 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 FAM30AQ9NZY2 134 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 PDZRN3Q9UPQ7 1066 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 COA3Q9Y2R0 106 aaPredicted RBP1.55□□□□□ -2.16
CEP290-201ENST00000309041 YEATS2Q9ULM3 1422 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 MYOM2P54296 1465 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 IBTKQ9P2D0 1353 aaPredicted RBP1.55□□□□□ -2.16
CEP290-201ENST00000309041 C3orf80F5H4A9 247 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 SCAMP1O15126 338 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 CYP7B1O75881 506 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 ZFAND5O76080 213 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 RAPGEF3O95398 923 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 CSB-PGBD3P0DP91 1061 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 ARAFP10398 606 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 DPP6P42658 865 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 KDSRQ06136 332 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 MAP3K12Q12852 859 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 MCM6Q14566 821 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 MAPRE1Q15691 268 aaKnown RBP1.55□□□□□ -2.16
CEP290-201ENST00000309041 HSP90AB4PQ58FF6 505 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 XKR5Q6UX68 686 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 MCM10Q7L590 875 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 TEX9Q8N6V9 391 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 SUPT20HQ8NEM7 779 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 FIG4Q92562 907 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 DLG3Q92796 817 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 ERO1AQ96HE7 468 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 SCLYQ96I15 445 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 MAP7D2Q96T17 732 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 SPOCK3Q9BQ16 436 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 FBRSQ9HAH7 460 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 MORF4L1Q9UBU8 362 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 MAP4K5Q9Y4K4 846 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 HRH3Q9Y5N1 445 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 AQRO60306 1485 aaKnown RBP eCLIP1.55□□□□□ -2.16
CEP290-201ENST00000309041 TOP2AP11388 1531 aaKnown RBP1.55□□□□□ -2.16
CEP290-201ENST00000309041 ERICH3Q5RHP9 1530 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 CCDC144AA2RUR9 1427 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 BAIAP3O94812 1187 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 FOXK1P85037 733 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 TRDNQ13061 729 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 CREG2Q8IUH2 290 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 PLCD3Q8N3E9 789 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 ZNF507Q8TCN5 953 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 PPIL4Q8WUA2 492 aaKnown RBP eCLIP1.55□□□□□ -2.16
CEP290-201ENST00000309041 LRRN4Q8WUT4 740 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 ATXN2LQ8WWM7 1075 aaKnown RBP1.55□□□□□ -2.16
CEP290-201ENST00000309041 HGH1Q9BTY7 390 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 CFHR5Q9BXR6 569 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 COG4Q9H9E3 785 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 GPHNQ9NQX3 736 aaPredicted RBP1.55□□□□□ -2.16
CEP290-201ENST00000309041 USP35Q9P2H5 1018 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 TLK1Q9UKI8 766 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 PTPN23Q9H3S7 1636 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 COL5A2P05997 1499 aaPredicted RBP1.55□□□□□ -2.16
CEP290-201ENST00000309041 ZNF335Q9H4Z2 1342 aaPredicted RBP1.55□□□□□ -2.16
CEP290-201ENST00000309041 NUTM2EB1AL46 878 aaPredicted RBP1.55□□□□□ -2.16
CEP290-201ENST00000309041 PITPNM1O00562 1244 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 PROM1O43490 865 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 RHOBTB1O94844 696 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 HOXB5P09067 269 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 MTERF2Q49AM1 385 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 UBASH3BQ8TF42 649 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 CCDC102AQ96A19 550 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 PAIP2Q9BPZ3 127 aaKnown RBP1.55□□□□□ -2.16
CEP290-201ENST00000309041 NCOA1Q15788 1441 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 TMEM247A6NEH6 219 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 CCDC182A6NF36 153 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 USP17L5A8MUK1 530 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 PPEF1O14829 653 aaPredicted RBP1.55□□□□□ -2.16
CEP290-201ENST00000309041 KRT14P02533 472 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 ITGB6P18564 788 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 ATP2B1P20020 1258 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 ZNF165P49910 485 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 CBLBQ13191 982 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 PDE1CQ14123 709 aaPredicted RBP1.55□□□□□ -2.16
CEP290-201ENST00000309041 CXorf57Q6NSI4 855 aaKnown RBP1.55□□□□□ -2.16
CEP290-201ENST00000309041 CLEC9AQ6UXN8 241 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 MCEMP1Q8IX19 187 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 MPHOSPH9Q99550 1183 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 ELAC2Q9BQ52 826 aaKnown RBP1.55□□□□□ -2.16
CEP290-201ENST00000309041 EMILIN2Q9BXX0 1053 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 KAT14Q9H8E8 782 aa1.55□□□□□ -2.16
CEP290-201ENST00000309041 DHX29Q7Z478 1369 aaKnown RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 ADGRL1O94910 1474 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 SCAMP3O14828 347 aaKnown RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 TCEA1P23193 301 aaKnown RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 POU4F2Q12837 409 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 TRAF2Q12933 501 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 NEDD9Q14511 834 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 RSPO2Q6UXX9 243 aaPredicted RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 SYNE3Q6ZMZ3 975 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 SH3BP5LQ7L8J4 393 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 HSCBQ8IWL3 235 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 SMC5Q8IY18 1101 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 TMEM57Q8N5G2 664 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms