RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 ZNF274Q96GC6 653 aaPredicted RBP26.43■■□□□ 1.82
PDLIM2-202ENST00000308354 TNS1Q9HBL0 1735 aaKnown RBP26.43■■□□□ 1.82
PDLIM2-202ENST00000308354 PDS5AQ29RF7 1337 aaKnown RBP26.43■■□□□ 1.82
PDLIM2-202ENST00000308354 SMIM22K7EJ46 135 aa26.43■■□□□ 1.82
PDLIM2-202ENST00000308354 GADD45BO75293 160 aaPredicted RBP26.43■■□□□ 1.82
PDLIM2-202ENST00000308354 FBXL16Q8N461 479 aa26.43■■□□□ 1.82
PDLIM2-202ENST00000308354 CRAMP1Q96RY5 1269 aa26.43■■□□□ 1.82
PDLIM2-202ENST00000308354 BRIP1Q9BX63 1249 aa26.43■■□□□ 1.82
PDLIM2-202ENST00000308354 ANO8Q9HCE9 1232 aaPredicted RBP26.43■■□□□ 1.82
PDLIM2-202ENST00000308354 GGA1Q9UJY5 639 aa26.43■■□□□ 1.82
PDLIM2-202ENST00000308354 KLF18A0A0U1RQI7 1052 aa26.42■■□□□ 1.82
PDLIM2-202ENST00000308354 NSUN7Q8NE18 718 aaKnown RBP26.42■■□□□ 1.82
PDLIM2-202ENST00000308354 AATFQ9NY61 560 aaKnown RBP eCLIP26.42■■□□□ 1.82
PDLIM2-202ENST00000308354 ZNF804AQ7Z570 1209 aa26.42■■□□□ 1.82
PDLIM2-202ENST00000308354 TDRD7Q8NHU6 1098 aaKnown RBP26.42■■□□□ 1.82
PDLIM2-202ENST00000308354 RTN4Q9NQC3 1192 aaKnown RBP26.42■■□□□ 1.82
PDLIM2-202ENST00000308354 POLLQ9UGP5 575 aa26.42■■□□□ 1.82
PDLIM2-202ENST00000308354 PARP3Q9Y6F1 533 aa26.42■■□□□ 1.82
PDLIM2-202ENST00000308354 MINDY4BA8MYZ0 360 aa26.41■■□□□ 1.82
PDLIM2-202ENST00000308354 RRP12Q5JTH9 1297 aaKnown RBP26.41■■□□□ 1.82
PDLIM2-202ENST00000308354 OLFM4Q6UX06 510 aa26.41■■□□□ 1.82
PDLIM2-202ENST00000308354 PDCP20941 246 aa26.41■■□□□ 1.82
PDLIM2-202ENST00000308354 SENP2Q9HC62 589 aa26.41■■□□□ 1.82
PDLIM2-202ENST00000308354 TOMM22Q9NS69 142 aa26.41■■□□□ 1.82
PDLIM2-202ENST00000308354 ATP6V1DQ9Y5K8 247 aa26.41■■□□□ 1.82
PDLIM2-202ENST00000308354 PPEF1O14829 653 aaPredicted RBP26.4■■□□□ 1.82
PDLIM2-202ENST00000308354 KDM4AO75164 1064 aa26.4■■□□□ 1.82
PDLIM2-202ENST00000308354 ATP2B4P23634 1241 aa26.4■■□□□ 1.82
PDLIM2-202ENST00000308354 EVCP57679 992 aa26.4■■□□□ 1.82
PDLIM2-202ENST00000308354 GRIK5Q16478 980 aa26.4■■□□□ 1.82
PDLIM2-202ENST00000308354 AKNAD1Q5T1N1 836 aa26.4■■□□□ 1.82
PDLIM2-202ENST00000308354 SMARCC2Q8TAQ2 1214 aa26.4■■□□□ 1.82
PDLIM2-202ENST00000308354 ANKRD31Q8N7Z5 1873 aa26.4■■□□□ 1.82
PDLIM2-202ENST00000308354 PTPDC1A2A3K4 754 aa26.39■■□□□ 1.82
PDLIM2-202ENST00000308354 SRGNP10124 158 aa26.39■■□□□ 1.82
PDLIM2-202ENST00000308354 FOSBP53539 338 aa26.39■■□□□ 1.82
PDLIM2-202ENST00000308354 MFSD6Q6ZSS7 791 aa26.39■■□□□ 1.82
PDLIM2-202ENST00000308354 TMEM87AQ8NBN3 555 aa26.39■■□□□ 1.82
PDLIM2-202ENST00000308354 TBC1D16Q8TBP0 767 aa26.39■■□□□ 1.82
PDLIM2-202ENST00000308354 ZSWIM5Q9P217 1185 aa26.39■■□□□ 1.82
PDLIM2-202ENST00000308354 GOLGA8BA8MQT2 603 aa26.39■■□□□ 1.81
PDLIM2-202ENST00000308354 C6orf229H3BNL8 230 aa26.39■■□□□ 1.81
PDLIM2-202ENST00000308354 DZIP1Q86YF9 867 aaKnown RBP26.39■■□□□ 1.81
PDLIM2-202ENST00000308354 GOLGB1Q14789 3259 aaKnown RBP26.38■■□□□ 1.81
PDLIM2-202ENST00000308354 CYP2D7A0A087X1C5 515 aa26.38■■□□□ 1.81
PDLIM2-202ENST00000308354 DNM1Q05193 864 aaKnown RBP26.38■■□□□ 1.81
PDLIM2-202ENST00000308354 PPARAQ07869 468 aa26.38■■□□□ 1.81
PDLIM2-202ENST00000308354 TPRNQ4KMQ1 711 aa26.38■■□□□ 1.81
PDLIM2-202ENST00000308354 FAM173BQ6P4H8 233 aa26.38■■□□□ 1.81
PDLIM2-202ENST00000308354 FAM184AQ8NB25 1140 aa26.38■■□□□ 1.81
PDLIM2-202ENST00000308354 LLPHQ9BRT6 129 aaKnown RBP26.38■■□□□ 1.81
PDLIM2-202ENST00000308354 CD209Q9NNX6 404 aa26.38■■□□□ 1.81
PDLIM2-202ENST00000308354 HPS5Q9UPZ3 1129 aa26.38■■□□□ 1.81
PDLIM2-202ENST00000308354 ANGEL1Q9UNK9 670 aaKnown RBP26.38■■□□□ 1.81
PDLIM2-202ENST00000308354 WDR19Q8NEZ3 1342 aa26.37■■□□□ 1.81
PDLIM2-202ENST00000308354 C15orf52Q6ZUT6 534 aaKnown RBP26.37■■□□□ 1.81
PDLIM2-202ENST00000308354 SYCE3A1L190 88 aa26.37■■□□□ 1.81
PDLIM2-202ENST00000308354 SH2B2O14492 632 aaPredicted RBP26.37■■□□□ 1.81
PDLIM2-202ENST00000308354 FIBPO43427 364 aa26.37■■□□□ 1.81
PDLIM2-202ENST00000308354 WDR66Q8TBY9 1149 aa26.37■■□□□ 1.81
PDLIM2-202ENST00000308354 CAMKK2Q96RR4 588 aa26.37■■□□□ 1.81
PDLIM2-202ENST00000308354 PODXL2Q9NZ53 605 aa26.37■■□□□ 1.81
PDLIM2-202ENST00000308354 LDHBP07195 334 aaKnown RBP26.36■■□□□ 1.81
PDLIM2-202ENST00000308354 RXRAP19793 462 aa26.36■■□□□ 1.81
PDLIM2-202ENST00000308354 STAG1Q8WVM7 1258 aa26.36■■□□□ 1.81
PDLIM2-202ENST00000308354 ZKSCAN3Q9BRR0 538 aa26.36■■□□□ 1.81
PDLIM2-202ENST00000308354 DIXDC1Q155Q3 683 aa26.35■■□□□ 1.81
PDLIM2-202ENST00000308354 SLC15A2Q16348 729 aa26.35■■□□□ 1.81
PDLIM2-202ENST00000308354 SPTY2D1Q68D10 685 aaPredicted RBP26.35■■□□□ 1.81
PDLIM2-202ENST00000308354 IGDCC4Q8TDY8 1250 aa26.35■■□□□ 1.81
PDLIM2-202ENST00000308354 SP8Q8IXZ3 490 aa26.35■■□□□ 1.81
PDLIM2-202ENST00000308354 RIMBP2O15034 1052 aa26.34■■□□□ 1.81
PDLIM2-202ENST00000308354 NPR1P16066 1061 aa26.34■■□□□ 1.81
PDLIM2-202ENST00000308354 EVX2Q03828 476 aa26.34■■□□□ 1.81
PDLIM2-202ENST00000308354 TMEM67Q5HYA8 995 aa26.34■■□□□ 1.81
PDLIM2-202ENST00000308354 CNNM2Q9H8M5 875 aa26.34■■□□□ 1.81
PDLIM2-202ENST00000308354 ATP6V0A2Q9Y487 856 aa26.34■■□□□ 1.81
PDLIM2-202ENST00000308354 H3BQV1 296 aa26.34■■□□□ 1.81
PDLIM2-202ENST00000308354 PDE6BP35913 854 aa26.34■■□□□ 1.81
PDLIM2-202ENST00000308354 NASPP49321 788 aaPredicted RBP26.34■■□□□ 1.81
PDLIM2-202ENST00000308354 IFFO2Q5TF58 517 aa26.34■■□□□ 1.81
PDLIM2-202ENST00000308354 KRT23Q9C075 422 aa26.34■■□□□ 1.81
PDLIM2-202ENST00000308354 NRXN2Q9P2S2 1712 aa26.33■■□□□ 1.81
PDLIM2-202ENST00000308354 SALL1Q9NSC2 1324 aa26.33■■□□□ 1.81
PDLIM2-202ENST00000308354 IFIT3O14879 490 aaKnown RBP26.33■■□□□ 1.8
PDLIM2-202ENST00000308354 NFXL1Q6ZNB6 911 aa26.33■■□□□ 1.8
PDLIM2-202ENST00000308354 CCDC144CPQ8IYA2 1237 aa26.33■■□□□ 1.8
PDLIM2-202ENST00000308354 TMEM87BQ96K49 555 aa26.33■■□□□ 1.8
PDLIM2-202ENST00000308354 MYL10Q9BUA6 226 aa26.33■■□□□ 1.8
PDLIM2-202ENST00000308354 LY9Q9HBG7 655 aa26.33■■□□□ 1.8
PDLIM2-202ENST00000308354 BAZ2AQ9UIF9 1905 aaKnown RBP26.33■■□□□ 1.8
PDLIM2-202ENST00000308354 USP17L12C9JPN9 530 aa26.32■■□□□ 1.8
PDLIM2-202ENST00000308354 USP17L21D6R901 530 aa26.32■■□□□ 1.8
PDLIM2-202ENST00000308354 PDIA4P13667 645 aaKnown RBP26.32■■□□□ 1.8
PDLIM2-202ENST00000308354 FDPSP14324 419 aaKnown RBP26.32■■□□□ 1.8
PDLIM2-202ENST00000308354 HMGN5P82970 282 aaKnown RBP26.32■■□□□ 1.8
PDLIM2-202ENST00000308354 CTR9Q6PD62 1173 aa26.32■■□□□ 1.8
PDLIM2-202ENST00000308354 ZNF622Q969S3 477 aaKnown RBP eCLIP26.32■■□□□ 1.8
PDLIM2-202ENST00000308354 CHD4Q14839 1912 aa26.32■■□□□ 1.8
PDLIM2-202ENST00000308354 IL1R1P14778 569 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms