RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 PRR5LQ6MZQ0 368 aa13.36□□□□□ -0.27
SCG2-201ENST00000305409 SYAP1Q96A49 352 aaPredicted RBP13.36□□□□□ -0.27
SCG2-201ENST00000305409 ORC3Q9UBD5 711 aaPredicted RBP13.36□□□□□ -0.27
SCG2-201ENST00000305409 CARMIL3Q8ND23 1372 aa13.36□□□□□ -0.27
SCG2-201ENST00000305409 SALL1Q9NSC2 1324 aa13.36□□□□□ -0.27
SCG2-201ENST00000305409 SH2B2O14492 632 aaPredicted RBP13.35□□□□□ -0.27
SCG2-201ENST00000305409 IFIT3O14879 490 aaKnown RBP13.35□□□□□ -0.27
SCG2-201ENST00000305409 PRDM1O75626 825 aa13.35□□□□□ -0.27
SCG2-201ENST00000305409 POLR3DP05423 398 aaPredicted RBP13.35□□□□□ -0.27
SCG2-201ENST00000305409 HMGN5P82970 282 aaKnown RBP13.35□□□□□ -0.27
SCG2-201ENST00000305409 NAA16Q6N069 864 aaPredicted RBP13.35□□□□□ -0.27
SCG2-201ENST00000305409 MFSD6Q6ZSS7 791 aa13.35□□□□□ -0.27
SCG2-201ENST00000305409 PROM2Q8N271 834 aa13.35□□□□□ -0.27
SCG2-201ENST00000305409 CCDC82Q8N4S0 544 aa13.35□□□□□ -0.27
SCG2-201ENST00000305409 IGDCC4Q8TDY8 1250 aa13.35□□□□□ -0.27
SCG2-201ENST00000305409 AKNAD1Q5T1N1 836 aa13.35□□□□□ -0.27
SCG2-201ENST00000305409 CCDC183Q5T5S1 534 aa13.35□□□□□ -0.27
SCG2-201ENST00000305409 CMTR1Q8N1G2 835 aaKnown RBP13.35□□□□□ -0.27
SCG2-201ENST00000305409 PGBD1Q96JS3 809 aa13.35□□□□□ -0.27
SCG2-201ENST00000305409 TSPY26PQ9H489 355 aa13.35□□□□□ -0.27
SCG2-201ENST00000305409 AATFQ9NY61 560 aaKnown RBP eCLIP13.35□□□□□ -0.27
SCG2-201ENST00000305409 CICQ96RK0 1608 aaPredicted RBP13.35□□□□□ -0.27
SCG2-201ENST00000305409 NHSQ6T4R5 1651 aa13.35□□□□□ -0.27
SCG2-201ENST00000305409 GOLGA6L4A6NEF3 574 aa13.34□□□□□ -0.27
SCG2-201ENST00000305409 EVCP57679 992 aa13.34□□□□□ -0.27
SCG2-201ENST00000305409 MECOMQ03112 1051 aa13.34□□□□□ -0.27
SCG2-201ENST00000305409 ILDR1Q86SU0 546 aaPredicted RBP13.34□□□□□ -0.27
SCG2-201ENST00000305409 NACAP1Q9BZK3 213 aa13.34□□□□□ -0.27
SCG2-201ENST00000305409 SERPINB2P05120 415 aa13.34□□□□□ -0.27
SCG2-201ENST00000305409 METAP2P50579 478 aaKnown RBP eCLIP13.34□□□□□ -0.27
SCG2-201ENST00000305409 ALX1Q15699 326 aa13.34□□□□□ -0.27
SCG2-201ENST00000305409 APOA5Q6Q788 366 aa13.34□□□□□ -0.27
SCG2-201ENST00000305409 RIOK1Q9BRS2 568 aaKnown RBP13.34□□□□□ -0.27
SCG2-201ENST00000305409 LY9Q9HBG7 655 aa13.34□□□□□ -0.27
SCG2-201ENST00000305409 RRAGDQ9NQL2 400 aaPredicted RBP13.34□□□□□ -0.27
SCG2-201ENST00000305409 GRIK5Q16478 980 aa13.33□□□□□ -0.27
SCG2-201ENST00000305409 CSPP1Q1MSJ5 1256 aa13.33□□□□□ -0.27
SCG2-201ENST00000305409 USP28Q96RU2 1077 aa13.33□□□□□ -0.27
SCG2-201ENST00000305409 PPARAQ07869 468 aa13.33□□□□□ -0.28
SCG2-201ENST00000305409 CKAP2LQ8IYA6 745 aa13.33□□□□□ -0.28
SCG2-201ENST00000305409 FBXL16Q8N461 479 aa13.33□□□□□ -0.28
SCG2-201ENST00000305409 BICD2Q8TD16 824 aa13.33□□□□□ -0.28
SCG2-201ENST00000305409 NSUN4Q96CB9 384 aaKnown RBP13.33□□□□□ -0.28
SCG2-201ENST00000305409 C8orf76Q96K31 380 aa13.33□□□□□ -0.28
SCG2-201ENST00000305409 ANKRD2Q9GZV1 360 aa13.33□□□□□ -0.28
SCG2-201ENST00000305409 DACT1Q9NYF0 836 aa13.33□□□□□ -0.28
SCG2-201ENST00000305409 SCN7AQ01118 1682 aa13.33□□□□□ -0.28
SCG2-201ENST00000305409 PNPLA7Q6ZV29 1317 aa13.33□□□□□ -0.28
SCG2-201ENST00000305409 C4BP0C0L5 1744 aa13.33□□□□□ -0.28
SCG2-201ENST00000305409 GRAPQ13588 217 aa13.32□□□□□ -0.28
SCG2-201ENST00000305409 GRAPLQ8TC17 118 aaPredicted RBP13.32□□□□□ -0.28
SCG2-201ENST00000305409 RPGRQ92834 1020 aaKnown RBP13.32□□□□□ -0.28
SCG2-201ENST00000305409 SCAND2PQ9GZW5 306 aaPredicted RBP13.32□□□□□ -0.28
SCG2-201ENST00000305409 DDR1Q08345 913 aa13.32□□□□□ -0.28
SCG2-201ENST00000305409 TXNRD1Q16881 649 aa13.32□□□□□ -0.28
SCG2-201ENST00000305409 MPNDQ8N594 471 aa13.32□□□□□ -0.28
SCG2-201ENST00000305409 CHMP4CQ96CF2 233 aa13.32□□□□□ -0.28
SCG2-201ENST00000305409 GOLGA8AA7E2F4 631 aa13.31□□□□□ -0.28
SCG2-201ENST00000305409 KIF28PB7ZC32 967 aa13.31□□□□□ -0.28
SCG2-201ENST00000305409 ZBTB43O43298 467 aa13.31□□□□□ -0.28
SCG2-201ENST00000305409 NR1I2O75469 434 aa13.31□□□□□ -0.28
SCG2-201ENST00000305409 GNAT2P19087 354 aa13.31□□□□□ -0.28
SCG2-201ENST00000305409 NUP133Q8WUM0 1156 aa13.31□□□□□ -0.28
SCG2-201ENST00000305409 ZSCAN16Q9H4T2 348 aaPredicted RBP13.31□□□□□ -0.28
SCG2-201ENST00000305409 FAM217BQ9NTX9 383 aaPredicted RBP13.31□□□□□ -0.28
SCG2-201ENST00000305409 ARAP2Q8WZ64 1704 aa13.31□□□□□ -0.28
SCG2-201ENST00000305409 LAMB2P55268 1798 aa13.31□□□□□ -0.28
SCG2-201ENST00000305409 CYP2D6P10635 497 aa13.31□□□□□ -0.28
SCG2-201ENST00000305409 GPSM2P81274 684 aa13.31□□□□□ -0.28
SCG2-201ENST00000305409 DIXDC1Q155Q3 683 aa13.31□□□□□ -0.28
SCG2-201ENST00000305409 ANP32BQ92688 251 aaKnown RBP13.31□□□□□ -0.28
SCG2-201ENST00000305409 KIF3AQ9Y496 699 aa13.31□□□□□ -0.28
SCG2-201ENST00000305409 SLC12A7Q9Y666 1083 aa13.31□□□□□ -0.28
SCG2-201ENST00000305409 TNRC6CQ9HCJ0 1690 aaKnown RBP13.3□□□□□ -0.28
SCG2-201ENST00000305409 CCDC69A6NI79 296 aa13.3□□□□□ -0.28
SCG2-201ENST00000305409 USP17L12C9JPN9 530 aa13.3□□□□□ -0.28
SCG2-201ENST00000305409 USP17L21D6R901 530 aa13.3□□□□□ -0.28
SCG2-201ENST00000305409 DHX16O60231 1041 aaKnown RBP13.3□□□□□ -0.28
SCG2-201ENST00000305409 RANBP6O60518 1105 aaKnown RBP13.3□□□□□ -0.28
SCG2-201ENST00000305409 OLFM4Q6UX06 510 aa13.3□□□□□ -0.28
SCG2-201ENST00000305409 ZMYM6O95789 1325 aa13.3□□□□□ -0.28
SCG2-201ENST00000305409 ZNF831Q5JPB2 1677 aa13.3□□□□□ -0.28
SCG2-201ENST00000305409 SBF2Q86WG5 1849 aa13.3□□□□□ -0.28
SCG2-201ENST00000305409 PDIA4P13667 645 aaKnown RBP13.3□□□□□ -0.28
SCG2-201ENST00000305409 ZNF827Q17R98 1081 aa13.3□□□□□ -0.28
SCG2-201ENST00000305409 STAG1Q8WVM7 1258 aa13.3□□□□□ -0.28
SCG2-201ENST00000305409 TRIM44Q96DX7 344 aaPredicted RBP13.3□□□□□ -0.28
SCG2-201ENST00000305409 TMEM87BQ96K49 555 aa13.3□□□□□ -0.28
SCG2-201ENST00000305409 ALG1Q9BT22 464 aa13.3□□□□□ -0.28
SCG2-201ENST00000305409 RGL2O15211 777 aa13.29□□□□□ -0.28
SCG2-201ENST00000305409 GUCY1A2P33402 732 aa13.29□□□□□ -0.28
SCG2-201ENST00000305409 FBXO18Q8NFZ0 1043 aa13.29□□□□□ -0.28
SCG2-201ENST00000305409 SLC26A6Q9BXS9 759 aa13.29□□□□□ -0.28
SCG2-201ENST00000305409 KRT23Q9C075 422 aa13.29□□□□□ -0.28
SCG2-201ENST00000305409 CLIC4Q9Y696 253 aa13.29□□□□□ -0.28
SCG2-201ENST00000305409 TAF1LQ8IZX4 1826 aa13.29□□□□□ -0.28
SCG2-201ENST00000305409 UFL1O94874 794 aa13.29□□□□□ -0.28
SCG2-201ENST00000305409 ST5P78524 1137 aa13.29□□□□□ -0.28
SCG2-201ENST00000305409 PLCB2Q00722 1185 aa13.29□□□□□ -0.28
SCG2-201ENST00000305409 WTAPQ15007 396 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms