RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 GLG1Q92896 1179 aa8.82□□□□□ -1
SCN9A-201ENST00000303354 MXRA7P84157 204 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 MAGED2Q9UNF1 606 aaPredicted RBP8.81□□□□□ -1
SCN9A-201ENST00000303354 MAP3K5Q99683 1374 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 TIAM1Q13009 1591 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 A0A1B0GVL5 298 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 GCOM1H8Y6P7 765 aaPredicted RBP8.81□□□□□ -1
SCN9A-201ENST00000303354 MYZAPP0CAP1 466 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 BCAMP50895 628 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 FERMT1Q9BQL6 677 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 GTPBP4Q9BZE4 634 aaKnown RBP8.81□□□□□ -1
SCN9A-201ENST00000303354 COBLO75128 1261 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 ARHGEF16Q5VV41 709 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 FAM173BQ6P4H8 233 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.81□□□□□ -1
SCN9A-201ENST00000303354 GNG11P61952 73 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 STRN3Q13033 797 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 SULF1Q8IWU6 871 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 PPANQ9NQ55 473 aaKnown RBP8.81□□□□□ -1
SCN9A-201ENST00000303354 DNMBPQ6XZF7 1577 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 M0QZ92 97 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 ZSCAN12O43309 604 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 STX1AQ16623 288 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 TPH2Q8IWU9 490 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 UHRF1BP1Q6BDS2 1440 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 HGSO14964 777 aaPredicted RBP8.81□□□□□ -1
SCN9A-201ENST00000303354 FAM114A1Q8IWE2 563 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 VPS16Q9H269 839 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 TRPC3Q13507 836 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 SELENOSQ9BQE4 189 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 AZI2Q9H6S1 392 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 SLC1A4P43007 532 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 FAM196AQ6ZSG2 479 aa8.81□□□□□ -1
SCN9A-201ENST00000303354 DNAJC21Q5F1R6 531 aaKnown RBP8.8□□□□□ -1
SCN9A-201ENST00000303354 FAM102BQ5T8I3 360 aa8.8□□□□□ -1
SCN9A-201ENST00000303354 DACT1Q9NYF0 836 aa8.8□□□□□ -1
SCN9A-201ENST00000303354 B4DLN1 442 aa8.8□□□□□ -1
SCN9A-201ENST00000303354 MRPL12P52815 198 aaKnown RBP8.8□□□□□ -1
SCN9A-201ENST00000303354 GEN1Q17RS7 908 aa8.8□□□□□ -1
SCN9A-201ENST00000303354 BLZF1Q9H2G9 400 aa8.8□□□□□ -1
SCN9A-201ENST00000303354 SUGCTQ9HAC7 445 aa8.8□□□□□ -1
SCN9A-201ENST00000303354 KAT6BQ8WYB5 2073 aa8.8□□□□□ -1
SCN9A-201ENST00000303354 TRAPPC8Q9Y2L5 1435 aa8.8□□□□□ -1
SCN9A-201ENST00000303354 ZNF165P49910 485 aa8.8□□□□□ -1
SCN9A-201ENST00000303354 ASAP1Q9ULH1 1129 aa8.8□□□□□ -1
SCN9A-201ENST00000303354 ZSCAN22P10073 491 aaPredicted RBP8.8□□□□□ -1
SCN9A-201ENST00000303354 LZTFL1Q9NQ48 299 aa8.8□□□□□ -1
SCN9A-201ENST00000303354 MYO1AQ9UBC5 1043 aa8.8□□□□□ -1
SCN9A-201ENST00000303354 SCAF11Q99590 1463 aaKnown RBP8.8□□□□□ -1
SCN9A-201ENST00000303354 GOLGA6L7A0A1B0GV03 622 aa8.8□□□□□ -1
SCN9A-201ENST00000303354 ALDH1B1P30837 517 aa8.8□□□□□ -1
SCN9A-201ENST00000303354 TFAP4Q01664 338 aa8.8□□□□□ -1
SCN9A-201ENST00000303354 PDE4DQ08499 809 aa8.8□□□□□ -1
SCN9A-201ENST00000303354 MYCT1Q8N699 235 aa8.8□□□□□ -1
SCN9A-201ENST00000303354 SLC52A2Q9HAB3 445 aa8.8□□□□□ -1
SCN9A-201ENST00000303354 SPDYE16A6NNV3 312 aaPredicted RBP8.8□□□□□ -1
SCN9A-201ENST00000303354 SPDYE2Q495Y8 402 aa8.8□□□□□ -1
SCN9A-201ENST00000303354 IFT81Q8WYA0 676 aa8.8□□□□□ -1
SCN9A-201ENST00000303354 CARD14Q9BXL6 1004 aa8.8□□□□□ -1
SCN9A-201ENST00000303354 PUM3Q15397 648 aaKnown RBP8.8□□□□□ -1
SCN9A-201ENST00000303354 NCOA1Q15788 1441 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 TLDC2A0PJX2 215 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 ZFYP08048 801 aaPredicted RBP8.79□□□□□ -1
SCN9A-201ENST00000303354 CEP85Q6P2H3 762 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 ABCF3Q9NUQ8 709 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 ZNF532Q9HCE3 1301 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 TRIM75PA6NK02 468 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 RLBP1P12271 317 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 PLBD2Q8NHP8 589 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 PGBD1Q96JS3 809 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 SRP68Q9UHB9 627 aaKnown RBP8.79□□□□□ -1
SCN9A-201ENST00000303354 FAM169AQ9Y6X4 670 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 TRAF5O00463 557 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 PLCG2P16885 1265 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 GNAQP50148 359 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 SKIV2LQ15477 1246 aaKnown RBP8.79□□□□□ -1
SCN9A-201ENST00000303354 BRDTQ58F21 947 aaPredicted RBP8.79□□□□□ -1
SCN9A-201ENST00000303354 TNNI3KQ59H18 835 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 MFSD14BQ5SR56 506 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 FPGT-TNNI3KV9GXZ4 949 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 RAB3IL1Q8TBN0 382 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 DDX23Q9BUQ8 820 aaKnown RBP8.79□□□□□ -1
SCN9A-201ENST00000303354 GUCA1BQ9UMX6 200 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 SH3TC1Q8TE82 1336 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 PRAMEF22A3QJZ6 481 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 PRPF6O94906 941 aaKnown RBP8.79□□□□□ -1
SCN9A-201ENST00000303354 NUCB1Q02818 461 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 CTR9Q6PD62 1173 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 SEPT14Q6ZU15 432 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 TMTC2Q8N394 836 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 ABCC1P33527 1531 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 GDF11O95390 407 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 ARHGAP44Q17R89 818 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 BSPRYQ5W0U4 402 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 MMS19Q96T76 1030 aa8.79□□□□□ -1
SCN9A-201ENST00000303354 PRDM5Q9NQX1 630 aaPredicted RBP8.79□□□□□ -1
SCN9A-201ENST00000303354 PDE6BP35913 854 aa8.78□□□□□ -1
SCN9A-201ENST00000303354 TSTA3Q13630 321 aaPredicted RBP8.78□□□□□ -1
SCN9A-201ENST00000303354 DPP9Q86TI2 863 aa8.78□□□□□ -1
SCN9A-201ENST00000303354 ANKRD35Q8N283 1001 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms