RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 CRNKL1Q9BZJ0 848 aaKnown RBP15.41■□□□□ 0.06
CCDC7-202ENST00000302316 SOGA3Q5TF21 947 aa15.4■□□□□ 0.06
CCDC7-202ENST00000302316 DHX32Q7L7V1 743 aaKnown RBP15.4■□□□□ 0.06
CCDC7-202ENST00000302316 TBC1D10CQ8IV04 446 aa15.4■□□□□ 0.06
CCDC7-202ENST00000302316 NBPF3Q9H094 633 aa15.4■□□□□ 0.06
CCDC7-202ENST00000302316 CD2APQ9Y5K6 639 aa15.4■□□□□ 0.06
CCDC7-202ENST00000302316 GOLGB1Q14789 3259 aaKnown RBP15.4■□□□□ 0.06
CCDC7-202ENST00000302316 TIAM2Q8IVF5 1701 aa15.4■□□□□ 0.06
CCDC7-202ENST00000302316 BAG3O95817 575 aa15.4■□□□□ 0.06
CCDC7-202ENST00000302316 DALRD3Q5D0E6 543 aaKnown RBP15.4■□□□□ 0.06
CCDC7-202ENST00000302316 RALYLQ86SE5 291 aaKnown RBP15.4■□□□□ 0.06
CCDC7-202ENST00000302316 SLF2Q8IX21 1173 aa15.4■□□□□ 0.06
CCDC7-202ENST00000302316 PSMD1Q99460 953 aa15.4■□□□□ 0.06
CCDC7-202ENST00000302316 ALDH8A1Q9H2A2 487 aaPredicted RBP15.4■□□□□ 0.06
CCDC7-202ENST00000302316 SUGT1Q9Y2Z0 365 aa15.4■□□□□ 0.06
CCDC7-202ENST00000302316 MYH2Q9UKX2 1941 aa15.39■□□□□ 0.05
CCDC7-202ENST00000302316 FGD1P98174 961 aa15.39■□□□□ 0.05
CCDC7-202ENST00000302316 TRDNQ13061 729 aa15.39■□□□□ 0.05
CCDC7-202ENST00000302316 CUL4AQ13619 759 aa15.39■□□□□ 0.05
CCDC7-202ENST00000302316 Q6ZUG5 572 aa15.39■□□□□ 0.05
CCDC7-202ENST00000302316 CERS5Q8N5B7 392 aa15.39■□□□□ 0.05
CCDC7-202ENST00000302316 NCOA7Q8NI08 942 aa15.39■□□□□ 0.05
CCDC7-202ENST00000302316 BRCA1P38398 1863 aaKnown RBP15.39■□□□□ 0.05
CCDC7-202ENST00000302316 F8W031 263 aaPredicted RBP15.38■□□□□ 0.05
CCDC7-202ENST00000302316 TOB2Q14106 344 aaPredicted RBP15.38■□□□□ 0.05
CCDC7-202ENST00000302316 GIMAP6Q6P9H5 292 aa15.38■□□□□ 0.05
CCDC7-202ENST00000302316 MXD3Q9BW11 206 aa15.38■□□□□ 0.05
CCDC7-202ENST00000302316 LRRC2Q9BYS8 371 aa15.38■□□□□ 0.05
CCDC7-202ENST00000302316 BTDP43251 543 aa15.38■□□□□ 0.05
CCDC7-202ENST00000302316 CTDSPL2Q05D32 466 aa15.38■□□□□ 0.05
CCDC7-202ENST00000302316 ZSCAN31Q96LW9 406 aaPredicted RBP15.38■□□□□ 0.05
CCDC7-202ENST00000302316 KCNQ5Q9NR82 932 aa15.38■□□□□ 0.05
CCDC7-202ENST00000302316 ATP8A2Q9NTI2 1148 aa15.38■□□□□ 0.05
CCDC7-202ENST00000302316 LARGE1O95461 756 aa15.37■□□□□ 0.05
CCDC7-202ENST00000302316 DDIT3P35638 169 aa15.37■□□□□ 0.05
CCDC7-202ENST00000302316 PPP4CP60510 307 aa15.37■□□□□ 0.05
CCDC7-202ENST00000302316 STRIP1Q5VSL9 837 aa15.37■□□□□ 0.05
CCDC7-202ENST00000302316 CERS3Q8IU89 383 aa15.37■□□□□ 0.05
CCDC7-202ENST00000302316 MB21D2Q8IYB1 491 aaPredicted RBP15.37■□□□□ 0.05
CCDC7-202ENST00000302316 SH3RF3Q8TEJ3 882 aaPredicted RBP15.37■□□□□ 0.05
CCDC7-202ENST00000302316 SH2B1Q9NRF2 756 aaPredicted RBP15.37■□□□□ 0.05
CCDC7-202ENST00000302316 CHMP5Q9NZZ3 219 aa15.37■□□□□ 0.05
CCDC7-202ENST00000302316 TPCN1Q9ULQ1 816 aa15.37■□□□□ 0.05
CCDC7-202ENST00000302316 TTF2Q9UNY4 1162 aaKnown RBP15.37■□□□□ 0.05
CCDC7-202ENST00000302316 GAKO14976 1311 aa15.37■□□□□ 0.05
CCDC7-202ENST00000302316 NEDD4P46934 1319 aa15.37■□□□□ 0.05
CCDC7-202ENST00000302316 MINDY4BA8MYZ0 360 aa15.37■□□□□ 0.05
CCDC7-202ENST00000302316 MCM5P33992 734 aa15.37■□□□□ 0.05
CCDC7-202ENST00000302316 EXOSC10Q01780 885 aaKnown RBP15.37■□□□□ 0.05
CCDC7-202ENST00000302316 PPARAQ07869 468 aa15.37■□□□□ 0.05
CCDC7-202ENST00000302316 CHST3Q7LGC8 479 aa15.37■□□□□ 0.05
CCDC7-202ENST00000302316 DCP1AQ9NPI6 582 aaPredicted RBP15.37■□□□□ 0.05
CCDC7-202ENST00000302316 ZNF277Q9NRM2 450 aaPredicted RBP15.37■□□□□ 0.05
CCDC7-202ENST00000302316 SCN9AQ15858 1988 aa15.36■□□□□ 0.05
CCDC7-202ENST00000302316 GPR75-ASB3A0A0A6YYF3 556 aa15.36■□□□□ 0.05
CCDC7-202ENST00000302316 USP17L3A6NCW0 530 aa15.36■□□□□ 0.05
CCDC7-202ENST00000302316 USP17L4A6NCW7 530 aa15.36■□□□□ 0.05
CCDC7-202ENST00000302316 USP5P45974 858 aa15.36■□□□□ 0.05
CCDC7-202ENST00000302316 AKNAD1Q5T1N1 836 aa15.36■□□□□ 0.05
CCDC7-202ENST00000302316 USP17L1Q7RTZ2 530 aa15.36■□□□□ 0.05
CCDC7-202ENST00000302316 LARGE2Q8N3Y3 721 aa15.36■□□□□ 0.05
CCDC7-202ENST00000302316 BRF1Q92994 677 aa15.36■□□□□ 0.05
CCDC7-202ENST00000302316 FAM163AQ96GL9 167 aaPredicted RBP15.36■□□□□ 0.05
CCDC7-202ENST00000302316 INTS4Q96HW7 963 aaKnown RBP15.36■□□□□ 0.05
CCDC7-202ENST00000302316 BAZ2AQ9UIF9 1905 aaKnown RBP15.36■□□□□ 0.05
CCDC7-202ENST00000302316 PLCG2P16885 1265 aa15.35■□□□□ 0.05
CCDC7-202ENST00000302316 FKBP1AP62942 108 aaKnown RBP15.35■□□□□ 0.05
CCDC7-202ENST00000302316 ME3Q16798 604 aa15.35■□□□□ 0.05
CCDC7-202ENST00000302316 DACT2Q5SW24 774 aa15.35■□□□□ 0.05
CCDC7-202ENST00000302316 MFSD6Q6ZSS7 791 aa15.35■□□□□ 0.05
CCDC7-202ENST00000302316 CNNM2Q9H8M5 875 aa15.35■□□□□ 0.05
CCDC7-202ENST00000302316 CIZ1Q9ULV3 898 aaPredicted RBP15.35■□□□□ 0.05
CCDC7-202ENST00000302316 DAGLAQ9Y4D2 1042 aa15.35■□□□□ 0.05
CCDC7-202ENST00000302316 ZNF646O15015 1829 aaPredicted RBP15.35■□□□□ 0.05
CCDC7-202ENST00000302316 B4E1Z4 1266 aa15.35■□□□□ 0.05
CCDC7-202ENST00000302316 PRC1O43663 620 aa15.35■□□□□ 0.05
CCDC7-202ENST00000302316 CTR9Q6PD62 1173 aa15.35■□□□□ 0.05
CCDC7-202ENST00000302316 STK11IPQ8N1F8 1099 aa15.35■□□□□ 0.05
CCDC7-202ENST00000302316 STAG1Q8WVM7 1258 aa15.35■□□□□ 0.05
CCDC7-202ENST00000302316 RNF41Q9H4P4 317 aaPredicted RBP15.35■□□□□ 0.05
CCDC7-202ENST00000302316 SPON1Q9HCB6 807 aa15.35■□□□□ 0.05
CCDC7-202ENST00000302316 CWC22Q9HCG8 908 aaKnown RBP15.35■□□□□ 0.05
CCDC7-202ENST00000302316 ARPP21Q9UBL0 812 aaPredicted RBP15.35■□□□□ 0.05
CCDC7-202ENST00000302316 ANAPC4Q9UJX5 808 aa15.35■□□□□ 0.05
CCDC7-202ENST00000302316 LAMB1P07942 1786 aa15.34■□□□□ 0.05
CCDC7-202ENST00000302316 CYP2D7A0A087X1C5 515 aa15.34■□□□□ 0.05
CCDC7-202ENST00000302316 USP17L12C9JPN9 530 aa15.34■□□□□ 0.05
CCDC7-202ENST00000302316 USP17L21D6R901 530 aa15.34■□□□□ 0.05
CCDC7-202ENST00000302316 SCNN1DP51172 638 aa15.34■□□□□ 0.05
CCDC7-202ENST00000302316 CCDC83Q8IWF9 413 aa15.34■□□□□ 0.05
CCDC7-202ENST00000302316 TEX11Q8IYF3 940 aa15.34■□□□□ 0.05
CCDC7-202ENST00000302316 AGXT2Q9BYV1 514 aa15.34■□□□□ 0.05
CCDC7-202ENST00000302316 TOMM22Q9NS69 142 aa15.34■□□□□ 0.05
CCDC7-202ENST00000302316 BCS1LQ9Y276 419 aa15.34■□□□□ 0.05
CCDC7-202ENST00000302316 WDR19Q8NEZ3 1342 aa15.34■□□□□ 0.05
CCDC7-202ENST00000302316 NAV1Q8NEY1 1877 aa15.34■□□□□ 0.05
CCDC7-202ENST00000302316 YDJCA8MPS7 323 aa15.34■□□□□ 0.05
CCDC7-202ENST00000302316 ANTXR2P58335 489 aa15.34■□□□□ 0.05
CCDC7-202ENST00000302316 KIAA0825Q8IV33 1275 aa15.34■□□□□ 0.05
CCDC7-202ENST00000302316 TGFBRAP1Q8WUH2 860 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms