RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 LRRIQ3A6PVS8 624 aaPredicted RBP12.55□□□□□ -0.4
SNX20-201ENST00000300590 TEX33O43247 280 aa12.55□□□□□ -0.4
SNX20-201ENST00000300590 CHRM1P11229 460 aaPredicted RBP12.55□□□□□ -0.4
SNX20-201ENST00000300590 FMR1Q06787 632 aaKnown RBP eCLIP12.55□□□□□ -0.4
SNX20-201ENST00000300590 FCHSD1Q86WN1 690 aa12.55□□□□□ -0.4
SNX20-201ENST00000300590 SLC35F6Q8N357 371 aa12.55□□□□□ -0.4
SNX20-201ENST00000300590 ABTB2Q8N961 1025 aa12.55□□□□□ -0.4
SNX20-201ENST00000300590 BMP6P22004 513 aa12.55□□□□□ -0.4
SNX20-201ENST00000300590 CCDC102BQ68D86 513 aa12.55□□□□□ -0.4
SNX20-201ENST00000300590 RAD9BQ6WBX8 426 aa12.55□□□□□ -0.4
SNX20-201ENST00000300590 METTL16Q86W50 562 aaKnown RBP12.55□□□□□ -0.4
SNX20-201ENST00000300590 NOA1Q8NC60 698 aaKnown RBP12.55□□□□□ -0.4
SNX20-201ENST00000300590 RAI14Q9P0K7 980 aa12.55□□□□□ -0.4
SNX20-201ENST00000300590 PEAK1Q9H792 1746 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 HSPD1P10809 573 aaKnown RBP12.54□□□□□ -0.4
SNX20-201ENST00000300590 IBSPP21815 317 aaPredicted RBP12.54□□□□□ -0.4
SNX20-201ENST00000300590 MNAT1P51948 309 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 NCAPH2Q6IBW4 605 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 IQUBQ8NA54 791 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 USP6P35125 1406 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 ATP5J2-PTCD1G3V325 749 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 PTCD1O75127 700 aaKnown RBP12.54□□□□□ -0.4
SNX20-201ENST00000300590 RNF40O75150 1001 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 CORO7P57737 925 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 WASHC4Q2M389 1173 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 PPFIBP1Q86W92 1011 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 CEP112Q8N8E3 955 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 ACRBPQ8NEB7 543 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 LRRC59Q96AG4 307 aaKnown RBP12.54□□□□□ -0.4
SNX20-201ENST00000300590 NCAPGQ9BPX3 1015 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.54□□□□□ -0.4
SNX20-201ENST00000300590 C19orf44Q9H6X5 657 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 ROBO2Q9HCK4 1378 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 PLEKHG3A1L390 1219 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 CTAGE15A4D2H0 777 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 IGKV5-2P06315 115 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 CTAGE8P0CG41 777 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 NEXNQ0ZGT2 675 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 TTC19Q6DKK2 380 aaPredicted RBP12.54□□□□□ -0.4
SNX20-201ENST00000300590 UBE3BQ7Z3V4 1068 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 CTAGE6Q86UF2 777 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 CTAGE4Q8IX94 777 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 PHKBQ93100 1093 aa12.54□□□□□ -0.4
SNX20-201ENST00000300590 ZNF274Q96GC6 653 aaPredicted RBP12.54□□□□□ -0.4
SNX20-201ENST00000300590 SALL1Q9NSC2 1324 aa12.53□□□□□ -0.4
SNX20-201ENST00000300590 CTAGE9A4FU28 777 aa12.53□□□□□ -0.4
SNX20-201ENST00000300590 DDX58O95786 925 aaKnown RBP12.53□□□□□ -0.4
SNX20-201ENST00000300590 KIF23Q02241 960 aaPredicted RBP12.53□□□□□ -0.4
SNX20-201ENST00000300590 FKBP4Q02790 459 aaKnown RBP eCLIP12.53□□□□□ -0.4
SNX20-201ENST00000300590 YY1AP1Q9H869 796 aa12.53□□□□□ -0.4
SNX20-201ENST00000300590 TUBE1Q9UJT0 475 aa12.53□□□□□ -0.4
SNX20-201ENST00000300590 KCNH3Q9ULD8 1083 aa12.53□□□□□ -0.4
SNX20-201ENST00000300590 SETD1BQ9UPS6 1966 aaKnown RBP12.53□□□□□ -0.4
SNX20-201ENST00000300590 AKR1B15C9JRZ8 316 aaPredicted RBP12.53□□□□□ -0.4
SNX20-201ENST00000300590 PRC1O43663 620 aa12.53□□□□□ -0.4
SNX20-201ENST00000300590 SLC39A6Q13433 755 aa12.53□□□□□ -0.4
SNX20-201ENST00000300590 SLC39A14Q15043 492 aa12.53□□□□□ -0.4
SNX20-201ENST00000300590 DNAJC21Q5F1R6 531 aaKnown RBP12.53□□□□□ -0.4
SNX20-201ENST00000300590 KBTBD3Q8NAB2 608 aa12.53□□□□□ -0.4
SNX20-201ENST00000300590 CCT5P48643 541 aa12.52□□□□□ -0.4
SNX20-201ENST00000300590 RBL2Q08999 1139 aa12.52□□□□□ -0.4
SNX20-201ENST00000300590 VPS37DQ86XT2 251 aa12.52□□□□□ -0.4
SNX20-201ENST00000300590 SMARCC1Q92922 1105 aaPredicted RBP12.52□□□□□ -0.4
SNX20-201ENST00000300590 ALG1Q9BT22 464 aa12.52□□□□□ -0.4
SNX20-201ENST00000300590 MKRN1Q9UHC7 482 aaKnown RBP12.52□□□□□ -0.4
SNX20-201ENST00000300590 ADGRG1Q9Y653 693 aa12.52□□□□□ -0.4
SNX20-201ENST00000300590 GSPT2Q8IYD1 628 aaKnown RBP12.52□□□□□ -0.41
SNX20-201ENST00000300590 CNPY4Q8N129 248 aa12.52□□□□□ -0.41
SNX20-201ENST00000300590 CCDC82Q8N4S0 544 aa12.52□□□□□ -0.41
SNX20-201ENST00000300590 IGSF22Q8N9C0 903 aa12.52□□□□□ -0.41
SNX20-201ENST00000300590 AFAP1L1Q8TED9 768 aa12.52□□□□□ -0.41
SNX20-201ENST00000300590 EHD4Q9H223 541 aa12.52□□□□□ -0.41
SNX20-201ENST00000300590 HOOK1Q9UJC3 728 aaKnown RBP12.52□□□□□ -0.41
SNX20-201ENST00000300590 NRKQ7Z2Y5 1582 aa12.52□□□□□ -0.41
SNX20-201ENST00000300590 UBE2Q2LH0YL09 131 aa12.52□□□□□ -0.41
SNX20-201ENST00000300590 ENC1O14682 589 aa12.52□□□□□ -0.41
SNX20-201ENST00000300590 PLEKHO1Q53GL0 409 aaPredicted RBP12.52□□□□□ -0.41
SNX20-201ENST00000300590 FBXW10Q5XX13 1052 aa12.52□□□□□ -0.41
SNX20-201ENST00000300590 BRAPQ7Z569 592 aa12.52□□□□□ -0.41
SNX20-201ENST00000300590 FAM71BQ8TC56 605 aa12.52□□□□□ -0.41
SNX20-201ENST00000300590 CAPZA3Q96KX2 299 aa12.52□□□□□ -0.41
SNX20-201ENST00000300590 TEX13AQ9BXU3 409 aaPredicted RBP12.52□□□□□ -0.41
SNX20-201ENST00000300590 PAG1Q9NWQ8 432 aa12.52□□□□□ -0.41
SNX20-201ENST00000300590 FAM208AQ9UK61 1670 aaKnown RBP12.51□□□□□ -0.41
SNX20-201ENST00000300590 TBX2Q13207 712 aaPredicted RBP12.51□□□□□ -0.41
SNX20-201ENST00000300590 FKBP15Q5T1M5 1219 aa12.51□□□□□ -0.41
SNX20-201ENST00000300590 SETD1AO15047 1707 aaKnown RBP12.51□□□□□ -0.41
SNX20-201ENST00000300590 POLR2DO15514 142 aaKnown RBP12.51□□□□□ -0.41
SNX20-201ENST00000300590 TADA2BQ86TJ2 420 aa12.51□□□□□ -0.41
SNX20-201ENST00000300590 HAUS7Q99871 368 aa12.51□□□□□ -0.41
SNX20-201ENST00000300590 ACBD3Q9H3P7 528 aa12.51□□□□□ -0.41
SNX20-201ENST00000300590 BRMS1Q9HCU9 246 aa12.51□□□□□ -0.41
SNX20-201ENST00000300590 BABAM1Q9NWV8 329 aa12.51□□□□□ -0.41
SNX20-201ENST00000300590 DENND2AQ9ULE3 1009 aa12.51□□□□□ -0.41
SNX20-201ENST00000300590 USP31Q70CQ4 1352 aa12.51□□□□□ -0.41
SNX20-201ENST00000300590 PPFIA4O75335 1185 aa12.5□□□□□ -0.41
SNX20-201ENST00000300590 CASP1P29466 404 aa12.5□□□□□ -0.41
SNX20-201ENST00000300590 PPARDQ03181 441 aa12.5□□□□□ -0.41
SNX20-201ENST00000300590 PTPN12Q05209 780 aaKnown RBP12.5□□□□□ -0.41
SNX20-201ENST00000300590 GRIN1Q05586 938 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms