RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 TCP10L2B9ZVM9 353 aa11.73□□□□□ -0.53
GABRB3-201ENST00000299267 PDIA4P13667 645 aaKnown RBP11.73□□□□□ -0.53
GABRB3-201ENST00000299267 ATP2B4P23634 1241 aa11.73□□□□□ -0.53
GABRB3-201ENST00000299267 DLGAP5Q15398 846 aa11.73□□□□□ -0.53
GABRB3-201ENST00000299267 AKNAD1Q5T1N1 836 aa11.73□□□□□ -0.53
GABRB3-201ENST00000299267 CCDC183Q5T5S1 534 aa11.73□□□□□ -0.53
GABRB3-201ENST00000299267 SAMM50Q9Y512 469 aa11.73□□□□□ -0.53
GABRB3-201ENST00000299267 CIAO1O76071 339 aa11.73□□□□□ -0.53
GABRB3-201ENST00000299267 MCAMP43121 646 aa11.73□□□□□ -0.53
GABRB3-201ENST00000299267 EIF5P55010 431 aaKnown RBP11.73□□□□□ -0.53
GABRB3-201ENST00000299267 PIH1D3Q9NQM4 214 aaKnown RBP11.73□□□□□ -0.53
GABRB3-201ENST00000299267 FAM177A1Q8N128 213 aaPredicted RBP11.72□□□□□ -0.53
GABRB3-201ENST00000299267 OSBPL3Q9H4L5 887 aa11.72□□□□□ -0.53
GABRB3-201ENST00000299267 USP25Q9UHP3 1055 aa11.72□□□□□ -0.53
GABRB3-201ENST00000299267 XDHP47989 1333 aa11.72□□□□□ -0.53
GABRB3-201ENST00000299267 MYO5BQ9ULV0 1848 aa11.72□□□□□ -0.53
GABRB3-201ENST00000299267 M0R2C6 588 aa11.72□□□□□ -0.53
GABRB3-201ENST00000299267 LIG1P18858 919 aa11.72□□□□□ -0.53
GABRB3-201ENST00000299267 PPARAQ07869 468 aa11.72□□□□□ -0.53
GABRB3-201ENST00000299267 GPR162Q16538 588 aa11.72□□□□□ -0.53
GABRB3-201ENST00000299267 CNKSR1Q969H4 720 aa11.72□□□□□ -0.53
GABRB3-201ENST00000299267 KCNJ14Q9UNX9 436 aa11.72□□□□□ -0.53
GABRB3-201ENST00000299267 R3HCC1Q9Y3T6 440 aaKnown RBP11.72□□□□□ -0.53
GABRB3-201ENST00000299267 MAST3O60307 1309 aa11.72□□□□□ -0.53
GABRB3-201ENST00000299267 BTDP43251 543 aa11.72□□□□□ -0.53
GABRB3-201ENST00000299267 CFAP100Q494V2 611 aa11.72□□□□□ -0.53
GABRB3-201ENST00000299267 FILIP1LQ4L180 1135 aa11.72□□□□□ -0.53
GABRB3-201ENST00000299267 DEFB132Q7Z7B7 95 aa11.72□□□□□ -0.53
GABRB3-201ENST00000299267 IL27Q8NEV9 243 aa11.72□□□□□ -0.53
GABRB3-201ENST00000299267 TEKT1Q969V4 418 aa11.72□□□□□ -0.53
GABRB3-201ENST00000299267 LSG1Q9H089 658 aaKnown RBP11.72□□□□□ -0.53
GABRB3-201ENST00000299267 ZSCAN16Q9H4T2 348 aaPredicted RBP11.72□□□□□ -0.53
GABRB3-201ENST00000299267 MCM7P33993 719 aa11.72□□□□□ -0.53
GABRB3-201ENST00000299267 UBE2HP62256 183 aa11.72□□□□□ -0.53
GABRB3-201ENST00000299267 STIM1Q13586 685 aa11.72□□□□□ -0.53
GABRB3-201ENST00000299267 SCARF1Q14162 830 aa11.72□□□□□ -0.53
GABRB3-201ENST00000299267 MINPP1Q9UNW1 487 aa11.72□□□□□ -0.53
GABRB3-201ENST00000299267 FOXO4P98177 505 aa11.71□□□□□ -0.53
GABRB3-201ENST00000299267 CCDC12Q8WUD4 166 aaPredicted RBP11.71□□□□□ -0.53
GABRB3-201ENST00000299267 TPCN1Q9ULQ1 816 aa11.71□□□□□ -0.53
GABRB3-201ENST00000299267 MAP2P11137 1827 aaKnown RBP11.71□□□□□ -0.53
GABRB3-201ENST00000299267 MEGF6O75095 1541 aa11.71□□□□□ -0.53
GABRB3-201ENST00000299267 PRDX5P30044 214 aa11.71□□□□□ -0.53
GABRB3-201ENST00000299267 FCHSD1Q86WN1 690 aa11.71□□□□□ -0.53
GABRB3-201ENST00000299267 DSCC1Q9BVC3 393 aa11.71□□□□□ -0.53
GABRB3-201ENST00000299267 INCENPQ9NQS7 918 aa11.71□□□□□ -0.53
GABRB3-201ENST00000299267 TCP11L1Q9NUJ3 509 aa11.71□□□□□ -0.53
GABRB3-201ENST00000299267 CLIP2Q9UDT6 1046 aa11.71□□□□□ -0.53
GABRB3-201ENST00000299267 KIAA1210Q9ULL0 1709 aa11.71□□□□□ -0.54
GABRB3-201ENST00000299267 BBOX1O75936 387 aa11.71□□□□□ -0.54
GABRB3-201ENST00000299267 GOLGA8HP0CJ92 632 aa11.71□□□□□ -0.54
GABRB3-201ENST00000299267 GNAQP50148 359 aa11.71□□□□□ -0.54
GABRB3-201ENST00000299267 CACNB3P54284 484 aa11.71□□□□□ -0.54
GABRB3-201ENST00000299267 CPXCR1Q8N123 301 aa11.71□□□□□ -0.54
GABRB3-201ENST00000299267 LCORLQ8N3X6 602 aa11.71□□□□□ -0.54
GABRB3-201ENST00000299267 TBC1D22AQ8WUA7 517 aa11.71□□□□□ -0.54
GABRB3-201ENST00000299267 GPHNQ9NQX3 736 aaPredicted RBP11.71□□□□□ -0.54
GABRB3-201ENST00000299267 OVOS2A0A0G2JMS6 1433 aa11.71□□□□□ -0.54
GABRB3-201ENST00000299267 SPECC1Q5M775 1068 aa11.7□□□□□ -0.54
GABRB3-201ENST00000299267 MAP4K1Q92918 833 aa11.7□□□□□ -0.54
GABRB3-201ENST00000299267 FBXO3Q9UK99 471 aa11.7□□□□□ -0.54
GABRB3-201ENST00000299267 SPATA31A6Q5VVP1 1343 aa11.7□□□□□ -0.54
GABRB3-201ENST00000299267 SYKP43405 635 aa11.7□□□□□ -0.54
GABRB3-201ENST00000299267 SP4Q02446 784 aa11.7□□□□□ -0.54
GABRB3-201ENST00000299267 ZMYM1Q5SVZ6 1142 aa11.7□□□□□ -0.54
GABRB3-201ENST00000299267 FNBP4Q8N3X1 1017 aaPredicted RBP11.7□□□□□ -0.54
GABRB3-201ENST00000299267 PARP1P09874 1014 aaKnown RBP11.7□□□□□ -0.54
GABRB3-201ENST00000299267 LMOD1P29536 600 aaPredicted RBP11.7□□□□□ -0.54
GABRB3-201ENST00000299267 ZNF174Q15697 407 aa11.7□□□□□ -0.54
GABRB3-201ENST00000299267 PKD2L1Q9P0L9 805 aa11.7□□□□□ -0.54
GABRB3-201ENST00000299267 ARHGAP23Q9P227 1491 aa11.7□□□□□ -0.54
GABRB3-201ENST00000299267 CEMIPQ8WUJ3 1361 aa11.7□□□□□ -0.54
GABRB3-201ENST00000299267 CHRNA5P30532 468 aa11.7□□□□□ -0.54
GABRB3-201ENST00000299267 GRAPQ13588 217 aa11.7□□□□□ -0.54
GABRB3-201ENST00000299267 TMEM266Q2M3C6 531 aa11.7□□□□□ -0.54
GABRB3-201ENST00000299267 GRAPLQ8TC17 118 aaPredicted RBP11.7□□□□□ -0.54
GABRB3-201ENST00000299267 TMEM87BQ96K49 555 aa11.7□□□□□ -0.54
GABRB3-201ENST00000299267 SPTLC2O15270 562 aa11.69□□□□□ -0.54
GABRB3-201ENST00000299267 EAPPQ56P03 285 aaPredicted RBP11.69□□□□□ -0.54
GABRB3-201ENST00000299267 CDC37L1Q7L3B6 337 aa11.69□□□□□ -0.54
GABRB3-201ENST00000299267 PTF1AQ7RTS3 328 aa11.69□□□□□ -0.54
GABRB3-201ENST00000299267 FAM43AQ8N2R8 423 aa11.69□□□□□ -0.54
GABRB3-201ENST00000299267 RRP36Q96EU6 259 aaKnown RBP11.69□□□□□ -0.54
GABRB3-201ENST00000299267 INTS4Q96HW7 963 aaKnown RBP11.69□□□□□ -0.54
GABRB3-201ENST00000299267 BSDC1Q9NW68 430 aaPredicted RBP11.69□□□□□ -0.54
GABRB3-201ENST00000299267 A0A1B0GVL5 298 aa11.69□□□□□ -0.54
GABRB3-201ENST00000299267 TRIM75PA6NK02 468 aa11.69□□□□□ -0.54
GABRB3-201ENST00000299267 MTX1Q13505 466 aa11.69□□□□□ -0.54
GABRB3-201ENST00000299267 GPR108Q9NPR9 543 aa11.69□□□□□ -0.54
GABRB3-201ENST00000299267 CYP2E1P05181 493 aaPredicted RBP11.69□□□□□ -0.54
GABRB3-201ENST00000299267 ZNF165P49910 485 aa11.69□□□□□ -0.54
GABRB3-201ENST00000299267 KLHL40Q2TBA0 621 aa11.69□□□□□ -0.54
GABRB3-201ENST00000299267 LEMD3Q9Y2U8 911 aa11.69□□□□□ -0.54
GABRB3-201ENST00000299267 SIGLEC1Q9BZZ2 1709 aa11.69□□□□□ -0.54
GABRB3-201ENST00000299267 CALM1P0DP23 149 aa11.68□□□□□ -0.54
GABRB3-201ENST00000299267 CALM2P0DP24 149 aa11.68□□□□□ -0.54
GABRB3-201ENST00000299267 CALM3P0DP25 149 aa11.68□□□□□ -0.54
GABRB3-201ENST00000299267 ENOX2Q16206 610 aaKnown RBP11.68□□□□□ -0.54
GABRB3-201ENST00000299267 LETM2Q2VYF4 491 aa11.68□□□□□ -0.54
GABRB3-201ENST00000299267 ZSCAN23Q3MJ62 389 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms