RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 METAP2P50579 478 aaKnown RBP eCLIP11.75□□□□□ -0.53
FOXN4-201ENST00000299162 SPATA31A1Q5TZJ5 1347 aa11.75□□□□□ -0.53
FOXN4-201ENST00000299162 CLIC4Q9Y696 253 aa11.75□□□□□ -0.53
FOXN4-201ENST00000299162 CARMIL3Q8ND23 1372 aa11.75□□□□□ -0.53
FOXN4-201ENST00000299162 CYP7A1P22680 504 aa11.75□□□□□ -0.53
FOXN4-201ENST00000299162 VGLL2Q8N8G2 317 aa11.75□□□□□ -0.53
FOXN4-201ENST00000299162 GOLPH3LQ9H4A5 285 aa11.75□□□□□ -0.53
FOXN4-201ENST00000299162 PYCARDQ9ULZ3 195 aa11.75□□□□□ -0.53
FOXN4-201ENST00000299162 PARP4Q9UKK3 1724 aaKnown RBP11.75□□□□□ -0.53
FOXN4-201ENST00000299162 GLI3P10071 1580 aa11.75□□□□□ -0.53
FOXN4-201ENST00000299162 UBAP1LF5GYI3 381 aa11.75□□□□□ -0.53
FOXN4-201ENST00000299162 CAMTA2O94983 1202 aa11.75□□□□□ -0.53
FOXN4-201ENST00000299162 ZSCAN25Q6NSZ9 544 aa11.75□□□□□ -0.53
FOXN4-201ENST00000299162 PLA2G12BQ9BX93 195 aa11.75□□□□□ -0.53
FOXN4-201ENST00000299162 NBPF3Q9H094 633 aa11.75□□□□□ -0.53
FOXN4-201ENST00000299162 MRVI1Q9Y6F6 885 aa11.75□□□□□ -0.53
FOXN4-201ENST00000299162 ZNF165P49910 485 aa11.74□□□□□ -0.53
FOXN4-201ENST00000299162 SPECC1Q5M775 1068 aa11.74□□□□□ -0.53
FOXN4-201ENST00000299162 SYNE3Q6ZMZ3 975 aa11.74□□□□□ -0.53
FOXN4-201ENST00000299162 MB21D2Q8IYB1 491 aaPredicted RBP11.74□□□□□ -0.53
FOXN4-201ENST00000299162 SLC26A6Q9BXS9 759 aa11.74□□□□□ -0.53
FOXN4-201ENST00000299162 GNPATO15228 680 aa11.74□□□□□ -0.53
FOXN4-201ENST00000299162 KINO60870 393 aaKnown RBP11.74□□□□□ -0.53
FOXN4-201ENST00000299162 KLRK1P26718 216 aa11.74□□□□□ -0.53
FOXN4-201ENST00000299162 CBX8Q9HC52 389 aa11.74□□□□□ -0.53
FOXN4-201ENST00000299162 CDHR2Q9BYE9 1310 aa11.73□□□□□ -0.53
FOXN4-201ENST00000299162 CDC27P30260 824 aa11.73□□□□□ -0.53
FOXN4-201ENST00000299162 TTF1Q15361 905 aaPredicted RBP11.73□□□□□ -0.53
FOXN4-201ENST00000299162 IFNL3Q8IZI9 196 aa11.73□□□□□ -0.53
FOXN4-201ENST00000299162 LINC00116Q8NCU8 138 aa11.73□□□□□ -0.53
FOXN4-201ENST00000299162 SMARCC2Q8TAQ2 1214 aa11.73□□□□□ -0.53
FOXN4-201ENST00000299162 CELF1Q92879 486 aaKnown RBP11.73□□□□□ -0.53
FOXN4-201ENST00000299162 ALG1Q9BT22 464 aa11.73□□□□□ -0.53
FOXN4-201ENST00000299162 EPB41L4AQ9HCS5 686 aaPredicted RBP11.73□□□□□ -0.53
FOXN4-201ENST00000299162 JCADQ9P266 1359 aa11.73□□□□□ -0.53
FOXN4-201ENST00000299162 GOLGA8AA7E2F4 631 aa11.73□□□□□ -0.53
FOXN4-201ENST00000299162 KIF28PB7ZC32 967 aa11.73□□□□□ -0.53
FOXN4-201ENST00000299162 STRBPQ96SI9 672 aaKnown RBP11.73□□□□□ -0.53
FOXN4-201ENST00000299162 ZSCAN16Q9H4T2 348 aaPredicted RBP11.73□□□□□ -0.53
FOXN4-201ENST00000299162 HPS5Q9UPZ3 1129 aa11.73□□□□□ -0.53
FOXN4-201ENST00000299162 TOGARAM1Q9Y4F4 1720 aa11.73□□□□□ -0.53
FOXN4-201ENST00000299162 ERVV-1B6SEH8 477 aa11.73□□□□□ -0.53
FOXN4-201ENST00000299162 UQCRFS1P1P0C7P4 283 aa11.73□□□□□ -0.53
FOXN4-201ENST00000299162 DYNLL1P63167 89 aaKnown RBP11.73□□□□□ -0.53
FOXN4-201ENST00000299162 EVX2Q03828 476 aa11.73□□□□□ -0.53
FOXN4-201ENST00000299162 ZRSR1Q15695 479 aaKnown RBP11.73□□□□□ -0.53
FOXN4-201ENST00000299162 GPR101Q96P66 508 aaPredicted RBP11.73□□□□□ -0.53
FOXN4-201ENST00000299162 ZSWIM5Q9P217 1185 aa11.73□□□□□ -0.53
FOXN4-201ENST00000299162 NRBP1Q9UHY1 535 aa11.73□□□□□ -0.53
FOXN4-201ENST00000299162 ANGEL1Q9UNK9 670 aaKnown RBP11.73□□□□□ -0.53
FOXN4-201ENST00000299162 CCDC69A6NI79 296 aa11.72□□□□□ -0.53
FOXN4-201ENST00000299162 BECN2A8MW95 431 aa11.72□□□□□ -0.53
FOXN4-201ENST00000299162 ILDR1Q86SU0 546 aaPredicted RBP11.72□□□□□ -0.53
FOXN4-201ENST00000299162 ANKRD18AQ8IVF6 992 aa11.72□□□□□ -0.53
FOXN4-201ENST00000299162 ZNF274Q96GC6 653 aaPredicted RBP11.72□□□□□ -0.53
FOXN4-201ENST00000299162 PRIMPOLQ96LW4 560 aa11.72□□□□□ -0.53
FOXN4-201ENST00000299162 ZBTB43O43298 467 aa11.72□□□□□ -0.53
FOXN4-201ENST00000299162 RANBP6O60518 1105 aaKnown RBP11.72□□□□□ -0.53
FOXN4-201ENST00000299162 TBC1D9BQ66K14 1250 aa11.72□□□□□ -0.53
FOXN4-201ENST00000299162 ADGRA1Q86SQ6 560 aa11.72□□□□□ -0.53
FOXN4-201ENST00000299162 ZNF396Q96N95 335 aaPredicted RBP11.72□□□□□ -0.53
FOXN4-201ENST00000299162 KCNJ14Q9UNX9 436 aa11.72□□□□□ -0.53
FOXN4-201ENST00000299162 SLC12A7Q9Y666 1083 aa11.72□□□□□ -0.53
FOXN4-201ENST00000299162 MROH5Q6ZUA9 1318 aa11.72□□□□□ -0.53
FOXN4-201ENST00000299162 BAZ2BQ9UIF8 2168 aaKnown RBP11.72□□□□□ -0.53
FOXN4-201ENST00000299162 DHX16O60231 1041 aaKnown RBP11.71□□□□□ -0.53
FOXN4-201ENST00000299162 PTGS1P23219 599 aa11.71□□□□□ -0.53
FOXN4-201ENST00000299162 HSP90AA4PQ58FG1 418 aa11.71□□□□□ -0.53
FOXN4-201ENST00000299162 MFSD6Q6ZSS7 791 aa11.71□□□□□ -0.53
FOXN4-201ENST00000299162 NBPF5PQ86XG9 351 aaPredicted RBP11.71□□□□□ -0.53
FOXN4-201ENST00000299162 FAM200AQ8TCP9 573 aa11.71□□□□□ -0.53
FOXN4-201ENST00000299162 ALDH8A1Q9H2A2 487 aaPredicted RBP11.71□□□□□ -0.53
FOXN4-201ENST00000299162 CLSTN2Q9H4D0 955 aa11.71□□□□□ -0.53
FOXN4-201ENST00000299162 PCDHA7Q9UN72 937 aa11.71□□□□□ -0.53
FOXN4-201ENST00000299162 GOLGA6L19H0YKK7 550 aa11.71□□□□□ -0.53
FOXN4-201ENST00000299162 C11orf57Q6ZUT1 292 aaPredicted RBP11.71□□□□□ -0.53
FOXN4-201ENST00000299162 LLPHQ9BRT6 129 aaKnown RBP11.71□□□□□ -0.53
FOXN4-201ENST00000299162 FUCA2Q9BTY2 467 aa11.71□□□□□ -0.53
FOXN4-201ENST00000299162 DDX19AQ9NUU7 478 aaKnown RBP11.71□□□□□ -0.53
FOXN4-201ENST00000299162 NTSR2O95665 410 aa11.71□□□□□ -0.54
FOXN4-201ENST00000299162 LRMPQ12912 555 aa11.71□□□□□ -0.54
FOXN4-201ENST00000299162 APOA5Q6Q788 366 aa11.71□□□□□ -0.54
FOXN4-201ENST00000299162 RFX7Q2KHR2 1363 aa11.71□□□□□ -0.54
FOXN4-201ENST00000299162 IARSP41252 1262 aaKnown RBP11.7□□□□□ -0.54
FOXN4-201ENST00000299162 NDUFA8P51970 172 aa11.7□□□□□ -0.54
FOXN4-201ENST00000299162 PTPN21Q16825 1174 aa11.7□□□□□ -0.54
FOXN4-201ENST00000299162 FILIP1Q7Z7B0 1213 aa11.7□□□□□ -0.54
FOXN4-201ENST00000299162 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.7□□□□□ -0.54
FOXN4-201ENST00000299162 FBXO3Q9UK99 471 aa11.7□□□□□ -0.54
FOXN4-201ENST00000299162 ZNF652Q9Y2D9 606 aa11.7□□□□□ -0.54
FOXN4-201ENST00000299162 TACC3Q9Y6A5 838 aa11.7□□□□□ -0.54
FOXN4-201ENST00000299162 ZPR1O75312 459 aa11.7□□□□□ -0.54
FOXN4-201ENST00000299162 GUCY1A2P33402 732 aa11.7□□□□□ -0.54
FOXN4-201ENST00000299162 NAA16Q6N069 864 aaPredicted RBP11.7□□□□□ -0.54
FOXN4-201ENST00000299162 AMIGO3Q86WK7 504 aa11.7□□□□□ -0.54
FOXN4-201ENST00000299162 CLIC6Q96NY7 704 aa11.7□□□□□ -0.54
FOXN4-201ENST00000299162 TJP1Q07157 1748 aa11.7□□□□□ -0.54
FOXN4-201ENST00000299162 UTRNP46939 3433 aa11.7□□□□□ -0.54
FOXN4-201ENST00000299162 GSG1L2A8MUP6 293 aa11.7□□□□□ -0.54
FOXN4-201ENST00000299162 PRR29P0C7W0 189 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms