RNA–Protein interactions for RNA: ENST00000296658.3

CMBL-201, Transcript of carboxymethylenebutenolidase homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMBL, Length 2,335 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMBL-201ENST00000296658 SCRN1Q12765 414 aa17.27■□□□□ 0.36
CMBL-201ENST00000296658 PTGS1P23219 599 aa17.27■□□□□ 0.35
CMBL-201ENST00000296658 ARID4AP29374 1257 aaPredicted RBP17.27■□□□□ 0.35
CMBL-201ENST00000296658 FKBP4Q02790 459 aaKnown RBP eCLIP17.27■□□□□ 0.35
CMBL-201ENST00000296658 CCDC102BQ68D86 513 aa17.27■□□□□ 0.35
CMBL-201ENST00000296658 UPF1Q92900 1129 aaKnown RBP eCLIP17.27■□□□□ 0.354e-11■■■■□ 20.4
CMBL-201ENST00000296658 RNF113AO15541 343 aaKnown RBP17.26■□□□□ 0.35
CMBL-201ENST00000296658 SCARF1Q14162 830 aa17.26■□□□□ 0.35
CMBL-201ENST00000296658 TMC4Q7Z404 712 aa17.26■□□□□ 0.35
CMBL-201ENST00000296658 GOLGA6L6A8MZA4 724 aa17.26■□□□□ 0.35
CMBL-201ENST00000296658 SRGNP10124 158 aa17.26■□□□□ 0.35
CMBL-201ENST00000296658 NPR1P16066 1061 aa17.26■□□□□ 0.35
CMBL-201ENST00000296658 ADD1P35611 737 aaKnown RBP17.26■□□□□ 0.35
CMBL-201ENST00000296658 SMARCC2Q8TAQ2 1214 aa17.26■□□□□ 0.35
CMBL-201ENST00000296658 SNAP23O00161 211 aa17.25■□□□□ 0.35
CMBL-201ENST00000296658 HSPD1P10809 573 aaKnown RBP17.25■□□□□ 0.35
CMBL-201ENST00000296658 DSCC1Q9BVC3 393 aa17.25■□□□□ 0.35
CMBL-201ENST00000296658 PHKA1P46020 1223 aa17.25■□□□□ 0.35
CMBL-201ENST00000296658 PI16Q6UXB8 463 aa17.25■□□□□ 0.35
CMBL-201ENST00000296658 PLA2G4DQ86XP0 818 aa17.25■□□□□ 0.35
CMBL-201ENST00000296658 BICD2Q8TD16 824 aa17.25■□□□□ 0.35
CMBL-201ENST00000296658 ARID3AQ99856 593 aa17.25■□□□□ 0.35
CMBL-201ENST00000296658 PDGFDQ9GZP0 370 aaPredicted RBP17.25■□□□□ 0.35
CMBL-201ENST00000296658 NRBP1Q9UHY1 535 aa17.25■□□□□ 0.35
CMBL-201ENST00000296658 CTDNEP1O95476 244 aa17.24■□□□□ 0.35
CMBL-201ENST00000296658 ALDH1B1P30837 517 aa17.24■□□□□ 0.35
CMBL-201ENST00000296658 CCDC186Q7Z3E2 898 aa17.24■□□□□ 0.35
CMBL-201ENST00000296658 TDRD7Q8NHU6 1098 aaKnown RBP17.24■□□□□ 0.35
CMBL-201ENST00000296658 OSBP2Q969R2 916 aa17.24■□□□□ 0.35
CMBL-201ENST00000296658 LEMD3Q9Y2U8 911 aa17.24■□□□□ 0.35
CMBL-201ENST00000296658 AKAP11Q9UKA4 1901 aa17.24■□□□□ 0.35
CMBL-201ENST00000296658 H3BQV1 296 aa17.24■□□□□ 0.35
CMBL-201ENST00000296658 PFKFB2O60825 505 aa17.24■□□□□ 0.35
CMBL-201ENST00000296658 MCAMP43121 646 aa17.24■□□□□ 0.35
CMBL-201ENST00000296658 LRMPQ12912 555 aa17.24■□□□□ 0.35
CMBL-201ENST00000296658 IFFO2Q5TF58 517 aa17.24■□□□□ 0.35
CMBL-201ENST00000296658 MASTLQ96GX5 879 aa17.24■□□□□ 0.35
CMBL-201ENST00000296658 DNAJC25Q9H1X3 360 aa17.24■□□□□ 0.35
CMBL-201ENST00000296658 ZSCAN16Q9H4T2 348 aaPredicted RBP17.24■□□□□ 0.35
CMBL-201ENST00000296658 KIF3AQ9Y496 699 aa17.24■□□□□ 0.35
CMBL-201ENST00000296658 ZNF165P49910 485 aa17.23■□□□□ 0.35
CMBL-201ENST00000296658 ZNF75DP51815 510 aa17.23■□□□□ 0.35
CMBL-201ENST00000296658 TTLL5Q6EMB2 1281 aa17.23■□□□□ 0.35
CMBL-201ENST00000296658 NSUN7Q8NE18 718 aaKnown RBP17.23■□□□□ 0.35
CMBL-201ENST00000296658 ZBTB22O15209 634 aa17.22■□□□□ 0.35
CMBL-201ENST00000296658 ZAP70P43403 619 aa17.22■□□□□ 0.35
CMBL-201ENST00000296658 FGD1P98174 961 aa17.22■□□□□ 0.35
CMBL-201ENST00000296658 DHX32Q7L7V1 743 aaKnown RBP17.22■□□□□ 0.35
CMBL-201ENST00000296658 LLPHQ9BRT6 129 aaKnown RBP17.22■□□□□ 0.35
CMBL-201ENST00000296658 ZNF804BA4D1E1 1349 aa17.22■□□□□ 0.35
CMBL-201ENST00000296658 XDHP47989 1333 aa17.22■□□□□ 0.35
CMBL-201ENST00000296658 E7EWF7 191 aa17.22■□□□□ 0.35
CMBL-201ENST00000296658 BCAMP50895 628 aa17.22■□□□□ 0.35
CMBL-201ENST00000296658 CAVIN4Q5BKX8 364 aa17.22■□□□□ 0.35
CMBL-201ENST00000296658 SP8Q8IXZ3 490 aa17.22■□□□□ 0.35
CMBL-201ENST00000296658 FTOQ9C0B1 505 aaKnown RBP eCLIP17.22■□□□□ 0.35
CMBL-201ENST00000296658 CFAP45Q9UL16 551 aa17.22■□□□□ 0.35
CMBL-201ENST00000296658 FOXP2O15409 715 aa17.21■□□□□ 0.35
CMBL-201ENST00000296658 EXOSC10Q01780 885 aaKnown RBP17.21■□□□□ 0.35
CMBL-201ENST00000296658 CEBPZQ03701 1054 aaKnown RBP17.21■□□□□ 0.35
CMBL-201ENST00000296658 APOBRQ0VD83 1088 aa17.21■□□□□ 0.35
CMBL-201ENST00000296658 TTF1Q15361 905 aaPredicted RBP17.21■□□□□ 0.35
CMBL-201ENST00000296658 LRRFIP1Q32MZ4 808 aaKnown RBP17.21■□□□□ 0.35
CMBL-201ENST00000296658 AGXT2Q9BYV1 514 aa17.21■□□□□ 0.35
CMBL-201ENST00000296658 TRIM5Q9C035 493 aa17.21■□□□□ 0.35
CMBL-201ENST00000296658 GNL3LQ9NVN8 582 aaKnown RBP17.21■□□□□ 0.35
CMBL-201ENST00000296658 RIOK3O14730 519 aaKnown RBP17.21■□□□□ 0.35
CMBL-201ENST00000296658 STYK1Q6J9G0 422 aa17.21■□□□□ 0.35
CMBL-201ENST00000296658 C15orf52Q6ZUT6 534 aaKnown RBP17.21■□□□□ 0.35
CMBL-201ENST00000296658 CHST3Q7LGC8 479 aa17.21■□□□□ 0.35
CMBL-201ENST00000296658 FBXO33Q7Z6M2 555 aa17.21■□□□□ 0.35
CMBL-201ENST00000296658 PODXL2Q9NZ53 605 aa17.21■□□□□ 0.35
CMBL-201ENST00000296658 ANKIB1Q9P2G1 1089 aa17.21■□□□□ 0.35
CMBL-201ENST00000296658 RCOR1Q9UKL0 485 aa17.21■□□□□ 0.35
CMBL-201ENST00000296658 LRRC37AA6NMS7 1700 aa17.21■□□□□ 0.34
CMBL-201ENST00000296658 COL11A2P13942 1736 aaPredicted RBP17.21■□□□□ 0.34
CMBL-201ENST00000296658 H0YIN7 160 aa17.2■□□□□ 0.34
CMBL-201ENST00000296658 PPEF1O14829 653 aaPredicted RBP17.2■□□□□ 0.34
CMBL-201ENST00000296658 HMGB1P09429 215 aaKnown RBP17.2■□□□□ 0.34
CMBL-201ENST00000296658 WASHC4Q2M389 1173 aa17.2■□□□□ 0.34
CMBL-201ENST00000296658 C2CD5Q86YS7 1000 aa17.2■□□□□ 0.34
CMBL-201ENST00000296658 FAM84BQ96KN1 310 aaPredicted RBP17.2■□□□□ 0.34
CMBL-201ENST00000296658 CCDC94Q9BW85 323 aaPredicted RBP17.2■□□□□ 0.34
CMBL-201ENST00000296658 IRS2Q9Y4H2 1338 aa17.2■□□□□ 0.34
CMBL-201ENST00000296658 MYH15Q9Y2K3 1946 aa17.2■□□□□ 0.34
CMBL-201ENST00000296658 WTIPA6NIX2 430 aaPredicted RBP17.2■□□□□ 0.34
CMBL-201ENST00000296658 ATP2B4P23634 1241 aa17.2■□□□□ 0.34
CMBL-201ENST00000296658 IQCB1Q15051 598 aa17.2■□□□□ 0.34
CMBL-201ENST00000296658 NAA16Q6N069 864 aaPredicted RBP17.2■□□□□ 0.34
CMBL-201ENST00000296658 ZSCAN25Q6NSZ9 544 aa17.2■□□□□ 0.34
CMBL-201ENST00000296658 SPATA5Q8NB90 893 aa17.2■□□□□ 0.34
CMBL-201ENST00000296658 ATP6V0A2Q9Y487 856 aa17.2■□□□□ 0.34
CMBL-201ENST00000296658 PTPDC1A2A3K4 754 aa17.19■□□□□ 0.34
CMBL-201ENST00000296658 FOSBP53539 338 aa17.19■□□□□ 0.34
CMBL-201ENST00000296658 GPSM2P81274 684 aa17.19■□□□□ 0.34
CMBL-201ENST00000296658 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.19■□□□□ 0.34
CMBL-201ENST00000296658 GOLPH3LQ9H4A5 285 aa17.19■□□□□ 0.34
CMBL-201ENST00000296658 MYH7P12883 1935 aa17.19■□□□□ 0.34
CMBL-201ENST00000296658 SEMA3EO15041 775 aa17.19■□□□□ 0.34
CMBL-201ENST00000296658 ZFYP08048 801 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms