RNA–Protein interactions for RNA: ENST00000296315.7

ARHGEF3-201, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-201ENST00000296315 DENND2AQ9ULE3 1009 aa11.82□□□□□ -0.52
ARHGEF3-201ENST00000296315 CCDC151A5D8V7 595 aa11.82□□□□□ -0.52
ARHGEF3-201ENST00000296315 POLR2DO15514 142 aaKnown RBP11.82□□□□□ -0.52
ARHGEF3-201ENST00000296315 HMGB1P09429 215 aaKnown RBP11.82□□□□□ -0.52
ARHGEF3-201ENST00000296315 CDC25AP30304 524 aa11.82□□□□□ -0.52
ARHGEF3-201ENST00000296315 SPECC1LQ69YQ0 1117 aa11.82□□□□□ -0.52
ARHGEF3-201ENST00000296315 SRGAP1Q7Z6B7 1085 aa11.82□□□□□ -0.52
ARHGEF3-201ENST00000296315 IGSF22Q8N9C0 903 aa11.82□□□□□ -0.52
ARHGEF3-201ENST00000296315 EHD4Q9H223 541 aa11.82□□□□□ -0.52
ARHGEF3-201ENST00000296315 MAPK8IP1Q9UQF2 711 aa11.82□□□□□ -0.52
ARHGEF3-201ENST00000296315 CTAGE9A4FU28 777 aa11.81□□□□□ -0.52
ARHGEF3-201ENST00000296315 FMR1Q06787 632 aaKnown RBP eCLIP11.81□□□□□ -0.52
ARHGEF3-201ENST00000296315 LMBR1LQ6UX01 489 aa11.81□□□□□ -0.52
ARHGEF3-201ENST00000296315 NOA1Q8NC60 698 aaKnown RBP11.81□□□□□ -0.52
ARHGEF3-201ENST00000296315 PAG1Q9NWQ8 432 aa11.81□□□□□ -0.52
ARHGEF3-201ENST00000296315 KCNH3Q9ULD8 1083 aa11.81□□□□□ -0.52
ARHGEF3-201ENST00000296315 IGSF1Q8N6C5 1336 aa11.81□□□□□ -0.52
ARHGEF3-201ENST00000296315 CUTAO60888 179 aa11.81□□□□□ -0.52
ARHGEF3-201ENST00000296315 SRGAP2O75044 1071 aa11.81□□□□□ -0.52
ARHGEF3-201ENST00000296315 RNF40O75150 1001 aa11.81□□□□□ -0.52
ARHGEF3-201ENST00000296315 HSPD1P10809 573 aaKnown RBP11.81□□□□□ -0.52
ARHGEF3-201ENST00000296315 VPS37DQ86XT2 251 aa11.81□□□□□ -0.52
ARHGEF3-201ENST00000296315 JMYQ8N9B5 988 aa11.81□□□□□ -0.52
ARHGEF3-201ENST00000296315 CRACR2AQ9BSW2 395 aa11.81□□□□□ -0.52
ARHGEF3-201ENST00000296315 PRR29P0C7W0 189 aa11.81□□□□□ -0.52
ARHGEF3-201ENST00000296315 SF3A3Q12874 501 aaKnown RBP eCLIP11.81□□□□□ -0.52
ARHGEF3-201ENST00000296315 FBXW10Q5XX13 1052 aa11.81□□□□□ -0.52
ARHGEF3-201ENST00000296315 PSMB7Q99436 277 aa11.81□□□□□ -0.52
ARHGEF3-201ENST00000296315 SERTAD1Q9UHV2 236 aa11.81□□□□□ -0.52
ARHGEF3-201ENST00000296315 RIMS1Q86UR5 1692 aaKnown RBP11.81□□□□□ -0.52
ARHGEF3-201ENST00000296315 AKR1B15C9JRZ8 316 aaPredicted RBP11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 MAGEA9P43362 315 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 RBL2Q08999 1139 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 FAM212AQ96EL1 285 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 NUP88Q99567 741 aaPredicted RBP11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 VPS16Q9H269 839 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 ACBD3Q9H3P7 528 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 INTS13Q9NVM9 706 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 HDAC6Q9UBN7 1215 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 ZNF609O15014 1411 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 ARAP3Q8WWN8 1544 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 BRD3Q15059 726 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 SHC4Q6S5L8 630 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 LRRC31Q6UY01 552 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 RAD9BQ6WBX8 426 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 TC2NQ8N9U0 490 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 AFAP1L1Q8TED9 768 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 KCNJ14Q9UNX9 436 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 ARHGEF10O15013 1369 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 ALKQ9UM73 1620 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 GOLGA6L9A6NEM1 432 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 TUBB4AP04350 444 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 GRIN1Q05586 938 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 BEND6Q5SZJ8 279 aaPredicted RBP11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 FOXP4Q8IVH2 680 aaPredicted RBP11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 PPM1EQ8WY54 764 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 SLC26A6Q9BXS9 759 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 ANKZF1Q9H8Y5 726 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 MED23Q9ULK4 1368 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 CDC42BPGQ6DT37 1551 aa11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 USP42Q9H9J4 1324 aaKnown RBP11.8□□□□□ -0.52
ARHGEF3-201ENST00000296315 A0A1W2PQ27 194 aa11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 A0A1W2PQ64 194 aa11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 A0A1W2PQD8 194 aa11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 A1BGP04217 495 aa11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 CMA1P23946 247 aa11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 IMMTQ16891 758 aaKnown RBP11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 CPLX2Q6PUV4 134 aaKnown RBP11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 INCENPQ9NQS7 918 aa11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 TRIM10Q9UDY6 481 aa11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 CDC23Q9UJX2 597 aa11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 LRRIQ3A6PVS8 624 aaPredicted RBP11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 ECM2O94769 699 aaPredicted RBP11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 CASP14P31944 242 aa11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 ESCO1Q5FWF5 840 aa11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 KRT40Q6A162 431 aa11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 RSRC2Q7L4I2 434 aaKnown RBP11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 METTL16Q86W50 562 aaKnown RBP11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 CEP112Q8N8E3 955 aa11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 ATP8B1O43520 1251 aa11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 ZEB2O60315 1214 aa11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 YEATS4O95619 227 aa11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 IGKV5-2P06315 115 aa11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 ATP5JP18859 108 aa11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 KBTBD3Q8NAB2 608 aa11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 PCMTD1Q96MG8 357 aaPredicted RBP11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 MYCBPQ99417 103 aaPredicted RBP11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 HSD3B7Q9H2F3 369 aa11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 KIF20BQ96Q89 1820 aa11.79□□□□□ -0.52
ARHGEF3-201ENST00000296315 SBNO1A3KN83 1393 aa11.78□□□□□ -0.52
ARHGEF3-201ENST00000296315 hCG_1642624A0A1W2PR95 340 aa11.78□□□□□ -0.52
ARHGEF3-201ENST00000296315 METAP2P50579 478 aaKnown RBP eCLIP11.78□□□□□ -0.52
ARHGEF3-201ENST00000296315 KIF23Q02241 960 aaPredicted RBP11.78□□□□□ -0.52
ARHGEF3-201ENST00000296315 PI16Q6UXB8 463 aa11.78□□□□□ -0.52
ARHGEF3-201ENST00000296315 NUP133Q8WUM0 1156 aa11.78□□□□□ -0.52
ARHGEF3-201ENST00000296315 M0R2C6 588 aa11.78□□□□□ -0.52
ARHGEF3-201ENST00000296315 STX10O60499 249 aa11.78□□□□□ -0.52
ARHGEF3-201ENST00000296315 ATP2C2O75185 946 aa11.78□□□□□ -0.52
ARHGEF3-201ENST00000296315 ATP2B2Q01814 1243 aa11.78□□□□□ -0.52
ARHGEF3-201ENST00000296315 TTC39AQ5SRH9 613 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms