RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 BTBD19C9JJ37 291 aa13.22□□□□□ -0.29
RFC4-201ENST00000296273 IRF6O14896 467 aa13.22□□□□□ -0.29
RFC4-201ENST00000296273 NBPF7P0C2Y1 421 aaPredicted RBP13.22□□□□□ -0.29
RFC4-201ENST00000296273 PPATQ06203 517 aa13.22□□□□□ -0.29
RFC4-201ENST00000296273 GRIK5Q16478 980 aa13.22□□□□□ -0.29
RFC4-201ENST00000296273 HHIPL2Q6UWX4 724 aa13.22□□□□□ -0.29
RFC4-201ENST00000296273 BICC1Q9H694 974 aaKnown RBP13.22□□□□□ -0.29
RFC4-201ENST00000296273 IQSEC3Q9UPP2 1182 aaPredicted RBP13.22□□□□□ -0.29
RFC4-201ENST00000296273 IFIT1P09914 478 aaKnown RBP13.21□□□□□ -0.29
RFC4-201ENST00000296273 HOXD10P28358 340 aa13.21□□□□□ -0.29
RFC4-201ENST00000296273 CACNB3P54284 484 aa13.21□□□□□ -0.29
RFC4-201ENST00000296273 LRRC24Q50LG9 513 aa13.21□□□□□ -0.29
RFC4-201ENST00000296273 APOBEC3HQ6NTF7 200 aaKnown RBP13.21□□□□□ -0.29
RFC4-201ENST00000296273 VGLL2Q8N8G2 317 aa13.21□□□□□ -0.29
RFC4-201ENST00000296273 ZKSCAN4Q969J2 545 aaPredicted RBP13.21□□□□□ -0.29
RFC4-201ENST00000296273 ZNF341Q9BYN7 854 aa13.21□□□□□ -0.29
RFC4-201ENST00000296273 C17orf99Q6UX52 265 aa13.2□□□□□ -0.3
RFC4-201ENST00000296273 ANKRD23Q86SG2 305 aa13.2□□□□□ -0.3
RFC4-201ENST00000296273 NKX2-3Q8TAU0 364 aa13.2□□□□□ -0.3
RFC4-201ENST00000296273 SH3TC2Q8TF17 1288 aa13.2□□□□□ -0.3
RFC4-201ENST00000296273 SPINK5Q9NQ38 1064 aaPredicted RBP13.2□□□□□ -0.3
RFC4-201ENST00000296273 COLQQ9Y215 455 aaPredicted RBP13.2□□□□□ -0.3
RFC4-201ENST00000296273 BCAMP50895 628 aa13.2□□□□□ -0.3
RFC4-201ENST00000296273 PUM3Q15397 648 aaKnown RBP13.2□□□□□ -0.3
RFC4-201ENST00000296273 WDR66Q8TBY9 1149 aa13.2□□□□□ -0.3
RFC4-201ENST00000296273 FAM151AQ8WW52 585 aa13.2□□□□□ -0.3
RFC4-201ENST00000296273 ARHGAP39Q9C0H5 1083 aa13.2□□□□□ -0.3
RFC4-201ENST00000296273 KIAA0100Q14667 2235 aaKnown RBP13.19□□□□□ -0.3
RFC4-201ENST00000296273 MYCP01106 439 aaPredicted RBP13.19□□□□□ -0.3
RFC4-201ENST00000296273 ANKRD44Q8N8A2 993 aa13.19□□□□□ -0.3
RFC4-201ENST00000296273 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.19□□□□□ -0.3
RFC4-201ENST00000296273 SRRDQ9UH36 339 aa13.19□□□□□ -0.3
RFC4-201ENST00000296273 ZNF112Q9UJU3 913 aa13.19□□□□□ -0.3
RFC4-201ENST00000296273 RCAN3Q9UKA8 241 aa13.19□□□□□ -0.3
RFC4-201ENST00000296273 KCNH4Q9UQ05 1017 aa13.19□□□□□ -0.3
RFC4-201ENST00000296273 PTPRCP08575 1304 aa13.18□□□□□ -0.3
RFC4-201ENST00000296273 ZNF521Q96K83 1311 aa13.18□□□□□ -0.3
RFC4-201ENST00000296273 PDHXO00330 501 aa13.18□□□□□ -0.3
RFC4-201ENST00000296273 FGFR2P21802 821 aa13.18□□□□□ -0.3
RFC4-201ENST00000296273 PSMC4P43686 418 aa13.18□□□□□ -0.3
RFC4-201ENST00000296273 MIGA2Q7L4E1 593 aa13.18□□□□□ -0.3
RFC4-201ENST00000296273 LPIN2Q92539 896 aa13.18□□□□□ -0.3
RFC4-201ENST00000296273 H0YGN5 161 aa13.17□□□□□ -0.3
RFC4-201ENST00000296273 FMNL1O95466 1100 aaPredicted RBP13.17□□□□□ -0.3
RFC4-201ENST00000296273 SLC5A1P13866 664 aa13.17□□□□□ -0.3
RFC4-201ENST00000296273 INPP5BP32019 993 aa13.17□□□□□ -0.3
RFC4-201ENST00000296273 GRK4P32298 578 aa13.17□□□□□ -0.3
RFC4-201ENST00000296273 NOL9Q5SY16 702 aaKnown RBP13.17□□□□□ -0.3
RFC4-201ENST00000296273 RAET1EQ8TD07 263 aa13.17□□□□□ -0.3
RFC4-201ENST00000296273 TRIM47Q96LD4 638 aa13.17□□□□□ -0.3
RFC4-201ENST00000296273 PARK7Q99497 189 aaKnown RBP13.17□□□□□ -0.3
RFC4-201ENST00000296273 CPA4Q9UI42 421 aa13.17□□□□□ -0.3
RFC4-201ENST00000296273 MYPNQ86TC9 1320 aa13.16□□□□□ -0.3
RFC4-201ENST00000296273 ADGRA2Q96PE1 1338 aa13.16□□□□□ -0.3
RFC4-201ENST00000296273 OSBPP22059 807 aa13.16□□□□□ -0.3
RFC4-201ENST00000296273 UBXN2AP68543 259 aa13.16□□□□□ -0.3
RFC4-201ENST00000296273 MTFR1Q15390 333 aa13.16□□□□□ -0.3
RFC4-201ENST00000296273 HTATIP2Q9BUP3 242 aa13.16□□□□□ -0.3
RFC4-201ENST00000296273 ZSWIM8A7E2V4 1837 aa13.15□□□□□ -0.3
RFC4-201ENST00000296273 EYA2O00167 538 aa13.15□□□□□ -0.3
RFC4-201ENST00000296273 CXCL11O14625 94 aa13.15□□□□□ -0.3
RFC4-201ENST00000296273 GJB1P08034 283 aa13.15□□□□□ -0.3
RFC4-201ENST00000296273 CAPN2P17655 700 aa13.15□□□□□ -0.3
RFC4-201ENST00000296273 GJA8P48165 433 aa13.15□□□□□ -0.3
RFC4-201ENST00000296273 MRPL50Q8N5N7 158 aaKnown RBP13.15□□□□□ -0.3
RFC4-201ENST00000296273 KLHDC4Q8TBB5 520 aa13.15□□□□□ -0.3
RFC4-201ENST00000296273 DPF3Q92784 378 aa13.15□□□□□ -0.3
RFC4-201ENST00000296273 SHISA4Q96DD7 197 aa13.15□□□□□ -0.3
RFC4-201ENST00000296273 GNL3LQ9NVN8 582 aaKnown RBP13.15□□□□□ -0.3
RFC4-201ENST00000296273 FBXO3Q9UK99 471 aa13.15□□□□□ -0.3
RFC4-201ENST00000296273 DAGLAQ9Y4D2 1042 aa13.15□□□□□ -0.3
RFC4-201ENST00000296273 E9PSI1 815 aa13.14□□□□□ -0.31
RFC4-201ENST00000296273 CTGFP29279 349 aa13.14□□□□□ -0.31
RFC4-201ENST00000296273 FCGRTP55899 365 aa13.14□□□□□ -0.31
RFC4-201ENST00000296273 TCP10Q12799 353 aa13.14□□□□□ -0.31
RFC4-201ENST00000296273 CDC42EP5Q6NZY7 148 aa13.14□□□□□ -0.31
RFC4-201ENST00000296273 SLAIN1Q8ND83 568 aa13.14□□□□□ -0.31
RFC4-201ENST00000296273 USP44Q9H0E7 712 aa13.14□□□□□ -0.31
RFC4-201ENST00000296273 SALL1Q9NSC2 1324 aa13.13□□□□□ -0.31
RFC4-201ENST00000296273 ZBTB22O15209 634 aa13.13□□□□□ -0.31
RFC4-201ENST00000296273 LDHBP07195 334 aaKnown RBP13.13□□□□□ -0.31
RFC4-201ENST00000296273 BCRP11274 1271 aa13.13□□□□□ -0.31
RFC4-201ENST00000296273 CCL5P13501 91 aa13.13□□□□□ -0.31
RFC4-201ENST00000296273 RRP1P56182 461 aaKnown RBP13.13□□□□□ -0.31
RFC4-201ENST00000296273 MOGSQ13724 837 aa13.13□□□□□ -0.31
RFC4-201ENST00000296273 CHRDL2Q6WN34 429 aa13.13□□□□□ -0.31
RFC4-201ENST00000296273 FASTKD5Q7L8L6 764 aaKnown RBP13.13□□□□□ -0.31
RFC4-201ENST00000296273 TRMT2AQ8IZ69 625 aaKnown RBP13.13□□□□□ -0.31
RFC4-201ENST00000296273 ZGPATQ8N5A5 531 aaKnown RBP13.13□□□□□ -0.31
RFC4-201ENST00000296273 RNF208Q9H0X6 261 aa13.13□□□□□ -0.31
RFC4-201ENST00000296273 BIN2Q9UBW5 565 aaPredicted RBP13.13□□□□□ -0.31
RFC4-201ENST00000296273 MYH13Q9UKX3 1938 aa13.12□□□□□ -0.31
RFC4-201ENST00000296273 SEMA3EO15041 775 aa13.12□□□□□ -0.31
RFC4-201ENST00000296273 ECM2O94769 699 aaPredicted RBP13.12□□□□□ -0.31
RFC4-201ENST00000296273 PRDX5P30044 214 aa13.12□□□□□ -0.31
RFC4-201ENST00000296273 RFX5P48382 616 aaPredicted RBP13.12□□□□□ -0.31
RFC4-201ENST00000296273 SLFN5Q08AF3 891 aa13.12□□□□□ -0.31
RFC4-201ENST00000296273 NFIAQ12857 509 aa13.12□□□□□ -0.31
RFC4-201ENST00000296273 DIXDC1Q155Q3 683 aa13.12□□□□□ -0.31
RFC4-201ENST00000296273 UBE2Q1Q7Z7E8 422 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms