RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 ALX1Q15699 326 aa7.15□□□□□ -1.27
VCAM1-201ENST00000294728 AXDND1Q5T1B0 1012 aaPredicted RBP7.15□□□□□ -1.27
VCAM1-201ENST00000294728 KRT222Q8N1A0 295 aa7.15□□□□□ -1.27
VCAM1-201ENST00000294728 JMYQ8N9B5 988 aa7.15□□□□□ -1.27
VCAM1-201ENST00000294728 FSIP1Q8NA03 581 aa7.15□□□□□ -1.27
VCAM1-201ENST00000294728 C16orf45Q96MC5 204 aaPredicted RBP7.15□□□□□ -1.27
VCAM1-201ENST00000294728 CWC25Q9NXE8 425 aaPredicted RBP7.15□□□□□ -1.27
VCAM1-201ENST00000294728 CDHR2Q9BYE9 1310 aa7.15□□□□□ -1.27
VCAM1-201ENST00000294728 CDKL5O76039 1030 aa7.14□□□□□ -1.27
VCAM1-201ENST00000294728 NT5DC1Q5TFE4 455 aa7.14□□□□□ -1.27
VCAM1-201ENST00000294728 MYSM1Q5VVJ2 828 aa7.14□□□□□ -1.27
VCAM1-201ENST00000294728 TTC5Q8N0Z6 440 aa7.14□□□□□ -1.27
VCAM1-201ENST00000294728 A0A087WZG4 1122 aa7.14□□□□□ -1.27
VCAM1-201ENST00000294728 HMGB2P26583 209 aaKnown RBP7.14□□□□□ -1.27
VCAM1-201ENST00000294728 PLCB2Q00722 1185 aa7.14□□□□□ -1.27
VCAM1-201ENST00000294728 IMMTQ16891 758 aaKnown RBP7.14□□□□□ -1.27
VCAM1-201ENST00000294728 ISCA1Q9BUE6 129 aa7.14□□□□□ -1.27
VCAM1-201ENST00000294728 IQSEC3Q9UPP2 1182 aaPredicted RBP7.14□□□□□ -1.27
VCAM1-201ENST00000294728 HPS5Q9UPZ3 1129 aa7.14□□□□□ -1.27
VCAM1-201ENST00000294728 SPTLC2O15270 562 aa7.14□□□□□ -1.27
VCAM1-201ENST00000294728 CSF1RP07333 972 aa7.14□□□□□ -1.27
VCAM1-201ENST00000294728 U2AF2P26368 475 aaKnown RBP eCLIP7.14□□□□□ -1.27
VCAM1-201ENST00000294728 E4F1Q66K89 784 aaPredicted RBP7.14□□□□□ -1.27
VCAM1-201ENST00000294728 APPBP2Q92624 585 aa7.14□□□□□ -1.27
VCAM1-201ENST00000294728 SIL1Q9H173 461 aa7.14□□□□□ -1.27
VCAM1-201ENST00000294728 UBR3Q6ZT12 1888 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 MYO5AQ9Y4I1 1855 aaKnown RBP7.13□□□□□ -1.27
VCAM1-201ENST00000294728 FOXP2O15409 715 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 SLFN14P0C7P3 912 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 KIF23Q02241 960 aaPredicted RBP7.13□□□□□ -1.27
VCAM1-201ENST00000294728 APOBRQ0VD83 1088 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 STK3Q13188 491 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 TUBB2AQ13885 445 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 ANO1Q5XXA6 986 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 UBE3BQ7Z3V4 1068 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 SGMS1Q86VZ5 419 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 TRIML1Q8N9V2 468 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 ZNF579Q8NAF0 562 aaKnown RBP7.13□□□□□ -1.27
VCAM1-201ENST00000294728 NFATC2IPQ8NCF5 419 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 NCOA7Q8NI08 942 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 TMEM87BQ96K49 555 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 TUBB2BQ9BVA1 445 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 UBXN6Q9BZV1 441 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 WDR90Q96KV7 1748 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 SLC3A2P08195 630 aaKnown RBP7.13□□□□□ -1.27
VCAM1-201ENST00000294728 ME1P48163 572 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 BMS1Q14692 1282 aaKnown RBP7.13□□□□□ -1.27
VCAM1-201ENST00000294728 RESP18Q5W5W9 173 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 LMBR1LQ6UX01 489 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 COL23A1Q86Y22 540 aaPredicted RBP7.13□□□□□ -1.27
VCAM1-201ENST00000294728 C8orf76Q96K31 380 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 PPP1R13BQ96KQ4 1090 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 TCEANC2Q96MN5 208 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 GPBP1L1Q9HC44 474 aaPredicted RBP7.13□□□□□ -1.27
VCAM1-201ENST00000294728 TFCP2L1Q9NZI6 479 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 USP16Q9Y5T5 823 aa7.13□□□□□ -1.27
VCAM1-201ENST00000294728 ZBTB22O15209 634 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 CYP27B1O15528 508 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 CUTAO60888 179 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 ZNF202O95125 648 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 IFIT1P09914 478 aaKnown RBP7.12□□□□□ -1.27
VCAM1-201ENST00000294728 SFPQP23246 707 aaKnown RBP eCLIP7.12□□□□□ -1.27
VCAM1-201ENST00000294728 NDUFA8P51970 172 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 ETF1P62495 437 aaKnown RBP7.12□□□□□ -1.27
VCAM1-201ENST00000294728 CBX1P83916 185 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 TBX2Q13207 712 aaPredicted RBP7.12□□□□□ -1.27
VCAM1-201ENST00000294728 TTF1Q15361 905 aaPredicted RBP7.12□□□□□ -1.27
VCAM1-201ENST00000294728 TERF2Q15554 542 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 ARMCX5Q6P1M9 558 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 AOPEPQ8N6M6 819 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 KLHDC4Q8TBB5 520 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 SEC62Q99442 399 aaKnown RBP7.12□□□□□ -1.27
VCAM1-201ENST00000294728 MPHOSPH8Q99549 860 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 HSD3B7Q9H2F3 369 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 NLRP2Q9NX02 1062 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 PCDH11XQ9BZA7 1347 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 PCDH11YQ9BZA8 1340 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 KIF3CO14782 793 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 GTF2E1P29083 439 aaPredicted RBP7.12□□□□□ -1.27
VCAM1-201ENST00000294728 FGD1P98174 961 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 AIMP1Q12904 312 aaKnown RBP7.12□□□□□ -1.27
VCAM1-201ENST00000294728 PTPAQ15257 358 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 UBE3CQ15386 1083 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 KMT5BQ4FZB7 885 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 CCDC158Q5M9N0 1113 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 CCDC129Q6ZRS4 1044 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 DDX46Q7L014 1031 aaKnown RBP7.12□□□□□ -1.27
VCAM1-201ENST00000294728 FILIP1Q7Z7B0 1213 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 TSC1Q92574 1164 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 EDC3Q96F86 508 aaKnown RBP7.12□□□□□ -1.27
VCAM1-201ENST00000294728 AK7Q96M32 723 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 TEX13AQ9BXU3 409 aaPredicted RBP7.12□□□□□ -1.27
VCAM1-201ENST00000294728 DNAI1Q9UI46 699 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 ZNF215Q9UL58 517 aaPredicted RBP7.12□□□□□ -1.27
VCAM1-201ENST00000294728 RIC1Q4ADV7 1423 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 A0A1B0GUL7 405 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 EFCAB8A8MWE9 144 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 ZSCAN12O43309 604 aa7.12□□□□□ -1.27
VCAM1-201ENST00000294728 ZRANB2O95218 330 aaKnown RBP eCLIP7.12□□□□□ -1.27
VCAM1-201ENST00000294728 LIFRP42702 1097 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms