RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 RNF113AO15541 343 aaKnown RBP18.1■□□□□ 0.49
SSRP1-202ENST00000293880 EPSTI1Q96J88 318 aa18.1■□□□□ 0.49
SSRP1-202ENST00000293880 CLSTN2Q9H4D0 955 aa18.09■□□□□ 0.49
SSRP1-202ENST00000293880 TBC1D7Q9P0N9 293 aa18.09■□□□□ 0.49
SSRP1-202ENST00000293880 EIF6P56537 245 aaKnown RBP18.09■□□□□ 0.49
SSRP1-202ENST00000293880 BEND3Q5T5X7 828 aa18.09■□□□□ 0.49
SSRP1-202ENST00000293880 PPFIBP2Q8ND30 876 aa18.09■□□□□ 0.49
SSRP1-202ENST00000293880 CARD6Q9BX69 1037 aa18.09■□□□□ 0.49
SSRP1-202ENST00000293880 MCM9Q9NXL9 1143 aa18.09■□□□□ 0.49
SSRP1-202ENST00000293880 SPDYE3A6NKU9 549 aa18.09■□□□□ 0.49
SSRP1-202ENST00000293880 MGARPQ8TDB4 240 aa18.09■□□□□ 0.49
SSRP1-202ENST00000293880 GDAP1L1Q96MZ0 367 aa18.09■□□□□ 0.49
SSRP1-202ENST00000293880 TACO1Q9BSH4 297 aaKnown RBP18.09■□□□□ 0.49
SSRP1-202ENST00000293880 PFDN4Q9NQP4 134 aa18.09■□□□□ 0.49
SSRP1-202ENST00000293880 LUC7L2Q9Y383 392 aaKnown RBP18.09■□□□□ 0.49
SSRP1-202ENST00000293880 MSH6P52701 1360 aa18.09■□□□□ 0.49
SSRP1-202ENST00000293880 SNX21Q969T3 373 aa18.09■□□□□ 0.49
SSRP1-202ENST00000293880 NCOA1Q15788 1441 aa18.09■□□□□ 0.49
SSRP1-202ENST00000293880 ATP8B2P98198 1209 aa18.09■□□□□ 0.49
SSRP1-202ENST00000293880 KLHL7Q8IXQ5 586 aa18.09■□□□□ 0.49
SSRP1-202ENST00000293880 IGSF22Q8N9C0 903 aa18.09■□□□□ 0.49
SSRP1-202ENST00000293880 JAKMIP2Q96AA8 810 aa18.09■□□□□ 0.49
SSRP1-202ENST00000293880 CCNT1O60563 726 aaKnown RBP18.08■□□□□ 0.49
SSRP1-202ENST00000293880 ZRANB1Q9UGI0 708 aa18.08■□□□□ 0.49
SSRP1-202ENST00000293880 DHX29Q7Z478 1369 aaKnown RBP18.08■□□□□ 0.49
SSRP1-202ENST00000293880 LETM2Q2VYF4 491 aa18.08■□□□□ 0.49
SSRP1-202ENST00000293880 DTHD1Q6ZMT9 781 aa18.08■□□□□ 0.49
SSRP1-202ENST00000293880 FMNL3Q8IVF7 1028 aa18.08■□□□□ 0.49
SSRP1-202ENST00000293880 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.08■□□□□ 0.49
SSRP1-202ENST00000293880 TXNDC9O14530 226 aa18.08■□□□□ 0.48
SSRP1-202ENST00000293880 ZNF853P0CG23 659 aa18.08■□□□□ 0.48
SSRP1-202ENST00000293880 ATP2A2P16615 1042 aaKnown RBP18.08■□□□□ 0.48
SSRP1-202ENST00000293880 GRM8O00222 908 aa18.08■□□□□ 0.48
SSRP1-202ENST00000293880 GCKP35557 465 aa18.08■□□□□ 0.48
SSRP1-202ENST00000293880 USP37Q86T82 979 aa18.08■□□□□ 0.48
SSRP1-202ENST00000293880 ARHGEF2Q92974 986 aaKnown RBP18.08■□□□□ 0.48
SSRP1-202ENST00000293880 C8orf37Q96NL8 207 aa18.08■□□□□ 0.48
SSRP1-202ENST00000293880 NAPGQ99747 312 aaPredicted RBP18.08■□□□□ 0.48
SSRP1-202ENST00000293880 ACEP12821 1306 aa18.07■□□□□ 0.48
SSRP1-202ENST00000293880 TOM1O60784 492 aa18.07■□□□□ 0.48
SSRP1-202ENST00000293880 RLBP1P12271 317 aa18.07■□□□□ 0.48
SSRP1-202ENST00000293880 CALCOCO2Q13137 446 aa18.07■□□□□ 0.48
SSRP1-202ENST00000293880 GPCPD1Q9NPB8 672 aa18.07■□□□□ 0.48
SSRP1-202ENST00000293880 BMP15O95972 392 aa18.07■□□□□ 0.48
SSRP1-202ENST00000293880 TSPYL6Q8N831 410 aa18.07■□□□□ 0.48
SSRP1-202ENST00000293880 E7EVH7 732 aa18.07■□□□□ 0.48
SSRP1-202ENST00000293880 BICC1Q9H694 974 aaKnown RBP18.07■□□□□ 0.48
SSRP1-202ENST00000293880 NKIRAS1Q9NYS0 192 aa18.07■□□□□ 0.48
SSRP1-202ENST00000293880 TPX2Q9ULW0 747 aaKnown RBP18.07■□□□□ 0.48
SSRP1-202ENST00000293880 LMNTD2Q8IXW0 634 aa18.07■□□□□ 0.48
SSRP1-202ENST00000293880 ANKRD44Q8N8A2 993 aa18.06■□□□□ 0.48
SSRP1-202ENST00000293880 NCOA5Q9HCD5 579 aaKnown RBP18.06■□□□□ 0.48
SSRP1-202ENST00000293880 DDX39AO00148 427 aaKnown RBP18.06■□□□□ 0.48
SSRP1-202ENST00000293880 SPOPO43791 374 aa18.06■□□□□ 0.48
SSRP1-202ENST00000293880 SETSIPP0DME0 302 aa18.06■□□□□ 0.48
SSRP1-202ENST00000293880 C8orf74Q6P047 294 aa18.06■□□□□ 0.48
SSRP1-202ENST00000293880 CEP85Q6P2H3 762 aa18.06■□□□□ 0.48
SSRP1-202ENST00000293880 PIK3AP1Q6ZUJ8 805 aa18.06■□□□□ 0.48
SSRP1-202ENST00000293880 MPHOSPH6Q99547 160 aaKnown RBP18.06■□□□□ 0.48
SSRP1-202ENST00000293880 USTQ9Y2C2 406 aa18.06■□□□□ 0.48
SSRP1-202ENST00000293880 TTC21BQ7Z4L5 1316 aa18.06■□□□□ 0.48
SSRP1-202ENST00000293880 GOLGA6CA6NDK9 693 aa18.06■□□□□ 0.48
SSRP1-202ENST00000293880 GADD45BO75293 160 aaPredicted RBP18.06■□□□□ 0.48
SSRP1-202ENST00000293880 GOLGA6DP0CG33 693 aa18.06■□□□□ 0.48
SSRP1-202ENST00000293880 GBP1P32455 592 aa18.06■□□□□ 0.48
SSRP1-202ENST00000293880 GOLGA6AQ9NYA3 693 aa18.06■□□□□ 0.48
SSRP1-202ENST00000293880 UTP11Q9Y3A2 253 aaKnown RBP18.06■□□□□ 0.48
SSRP1-202ENST00000293880 WDHD1O75717 1129 aaPredicted RBP18.06■□□□□ 0.48
SSRP1-202ENST00000293880 ASIC2Q16515 512 aa18.06■□□□□ 0.48
SSRP1-202ENST00000293880 SNX16P57768 344 aa18.06■□□□□ 0.48
SSRP1-202ENST00000293880 LCA5Q86VQ0 697 aa18.06■□□□□ 0.48
SSRP1-202ENST00000293880 STK38LQ9Y2H1 464 aa18.06■□□□□ 0.48
SSRP1-202ENST00000293880 PDE4DQ08499 809 aa18.05■□□□□ 0.48
SSRP1-202ENST00000293880 FAM173BQ6P4H8 233 aa18.05■□□□□ 0.48
SSRP1-202ENST00000293880 MAP3K1Q13233 1512 aa18.05■□□□□ 0.48
SSRP1-202ENST00000293880 TRAF5O00463 557 aa18.05■□□□□ 0.48
SSRP1-202ENST00000293880 MAP2K2P36507 400 aa18.05■□□□□ 0.48
SSRP1-202ENST00000293880 PTPROQ16827 1216 aa18.05■□□□□ 0.48
SSRP1-202ENST00000293880 TRIM68Q6AZZ1 485 aa18.05■□□□□ 0.48
SSRP1-202ENST00000293880 OTUD7BQ6GQQ9 843 aa18.05■□□□□ 0.48
SSRP1-202ENST00000293880 TMTC2Q8N394 836 aa18.05■□□□□ 0.48
SSRP1-202ENST00000293880 LRRC59Q96AG4 307 aaKnown RBP18.05■□□□□ 0.48
SSRP1-202ENST00000293880 NIP7Q9Y221 180 aaKnown RBP eCLIP18.05■□□□□ 0.48
SSRP1-202ENST00000293880 NEDD9Q14511 834 aa18.05■□□□□ 0.48
SSRP1-202ENST00000293880 SCAF11Q99590 1463 aaKnown RBP18.05■□□□□ 0.48
SSRP1-202ENST00000293880 INPP5BP32019 993 aa18.05■□□□□ 0.48
SSRP1-202ENST00000293880 FYB2Q5VWT5 728 aa18.05■□□□□ 0.48
SSRP1-202ENST00000293880 VPS52Q8N1B4 723 aa18.05■□□□□ 0.48
SSRP1-202ENST00000293880 USH1CQ9Y6N9 552 aa18.05■□□□□ 0.48
SSRP1-202ENST00000293880 ELP1O95163 1332 aa18.04■□□□□ 0.48
SSRP1-202ENST00000293880 CCT6BQ92526 530 aa18.04■□□□□ 0.48
SSRP1-202ENST00000293880 CUL7Q14999 1698 aa18.04■□□□□ 0.48
SSRP1-202ENST00000293880 OAS2P29728 719 aaKnown RBP18.04■□□□□ 0.48
SSRP1-202ENST00000293880 PNMA8AQ86V59 439 aaPredicted RBP18.04■□□□□ 0.48
SSRP1-202ENST00000293880 GSDMBQ8TAX9 411 aa18.04■□□□□ 0.48
SSRP1-202ENST00000293880 TSC1Q92574 1164 aa18.04■□□□□ 0.48
SSRP1-202ENST00000293880 DDX21Q9NR30 783 aaKnown RBP eCLIP18.04■□□□□ 0.48
SSRP1-202ENST00000293880 MTUS1Q9ULD2 1270 aa18.04■□□□□ 0.48
SSRP1-202ENST00000293880 SYNRGQ9UMZ2 1314 aa18.04■□□□□ 0.48
SSRP1-202ENST00000293880 NDUFAB1O14561 156 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms