RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 CLIC4Q9Y696 253 aa17.57■□□□□ 0.4
CCDC116-201ENST00000292779 ARAP2Q8WZ64 1704 aa17.57■□□□□ 0.4
CCDC116-201ENST00000292779 SNAP23O00161 211 aa17.56■□□□□ 0.4
CCDC116-201ENST00000292779 UQCRFS1P1P0C7P4 283 aa17.56■□□□□ 0.4
CCDC116-201ENST00000292779 FGFR2P21802 821 aa17.56■□□□□ 0.4
CCDC116-201ENST00000292779 LINC00301Q8NCQ3 95 aa17.56■□□□□ 0.4
CCDC116-201ENST00000292779 LRP5O75197 1615 aa17.56■□□□□ 0.4
CCDC116-201ENST00000292779 MROH5Q6ZUA9 1318 aa17.56■□□□□ 0.4
CCDC116-201ENST00000292779 A0A087WWV3 80 aa17.56■□□□□ 0.4
CCDC116-201ENST00000292779 TCRBV5S4A2TA0A5A2 114 aa17.56■□□□□ 0.4
CCDC116-201ENST00000292779 RXRBP28702 533 aa17.56■□□□□ 0.4
CCDC116-201ENST00000292779 ADALQ6DHV7 355 aa17.56■□□□□ 0.4
CCDC116-201ENST00000292779 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.56■□□□□ 0.4
CCDC116-201ENST00000292779 MRPS27Q92552 414 aaKnown RBP17.56■□□□□ 0.4
CCDC116-201ENST00000292779 FAM13BQ9NYF5 915 aa17.56■□□□□ 0.4
CCDC116-201ENST00000292779 ANGEL1Q9UNK9 670 aaKnown RBP17.56■□□□□ 0.4
CCDC116-201ENST00000292779 GOLGA6L19H0YKK7 550 aa17.55■□□□□ 0.4
CCDC116-201ENST00000292779 STK38Q15208 465 aa17.55■□□□□ 0.4
CCDC116-201ENST00000292779 FMR1NBQ8N0W7 255 aaPredicted RBP17.55■□□□□ 0.4
CCDC116-201ENST00000292779 MYRIPQ8NFW9 859 aa17.55■□□□□ 0.4
CCDC116-201ENST00000292779 PRIMPOLQ96LW4 560 aa17.55■□□□□ 0.4
CCDC116-201ENST00000292779 BCL11BQ9C0K0 894 aaPredicted RBP17.55■□□□□ 0.4
CCDC116-201ENST00000292779 SEC31BQ9NQW1 1179 aa17.55■□□□□ 0.4
CCDC116-201ENST00000292779 A0A1B0GVL5 298 aa17.55■□□□□ 0.4
CCDC116-201ENST00000292779 KIF28PB7ZC32 967 aa17.55■□□□□ 0.4
CCDC116-201ENST00000292779 MYSM1Q5VVJ2 828 aa17.55■□□□□ 0.4
CCDC116-201ENST00000292779 BRAPQ7Z569 592 aa17.55■□□□□ 0.4
CCDC116-201ENST00000292779 ERCC4Q92889 916 aaPredicted RBP17.55■□□□□ 0.4
CCDC116-201ENST00000292779 AK7Q96M32 723 aa17.55■□□□□ 0.4
CCDC116-201ENST00000292779 POLR3EQ9NVU0 708 aa17.55■□□□□ 0.4
CCDC116-201ENST00000292779 ZMYM6O95789 1325 aa17.54■□□□□ 0.4
CCDC116-201ENST00000292779 A0A1W2PQ27 194 aa17.54■□□□□ 0.4
CCDC116-201ENST00000292779 A0A1W2PQ64 194 aa17.54■□□□□ 0.4
CCDC116-201ENST00000292779 A0A1W2PQD8 194 aa17.54■□□□□ 0.4
CCDC116-201ENST00000292779 B4E1Z4 1266 aa17.54■□□□□ 0.4
CCDC116-201ENST00000292779 SH2B2O14492 632 aaPredicted RBP17.54■□□□□ 0.4
CCDC116-201ENST00000292779 SF3A1Q15459 793 aaKnown RBP17.54■□□□□ 0.4
CCDC116-201ENST00000292779 STRBPQ96SI9 672 aaKnown RBP17.54■□□□□ 0.4
CCDC116-201ENST00000292779 UTP14AQ9BVJ6 771 aaKnown RBP17.54■□□□□ 0.4
CCDC116-201ENST00000292779 CCNL1Q9UK58 526 aaPredicted RBP17.54■□□□□ 0.4
CCDC116-201ENST00000292779 CHD4Q14839 1912 aa17.54■□□□□ 0.4
CCDC116-201ENST00000292779 NDUFA8P51970 172 aa17.54■□□□□ 0.4
CCDC116-201ENST00000292779 KIF23Q02241 960 aaPredicted RBP17.54■□□□□ 0.4
CCDC116-201ENST00000292779 LRMPQ12912 555 aa17.54■□□□□ 0.4
CCDC116-201ENST00000292779 FAM196AQ6ZSG2 479 aa17.54■□□□□ 0.4
CCDC116-201ENST00000292779 SPATA5Q8NB90 893 aa17.54■□□□□ 0.4
CCDC116-201ENST00000292779 KCNG4Q8TDN1 519 aa17.54■□□□□ 0.4
CCDC116-201ENST00000292779 AIDAQ96BJ3 306 aa17.54■□□□□ 0.4
CCDC116-201ENST00000292779 MPHOSPH8Q99549 860 aa17.54■□□□□ 0.4
CCDC116-201ENST00000292779 PDCL3Q9H2J4 239 aa17.54■□□□□ 0.4
CCDC116-201ENST00000292779 SENP2Q9HC62 589 aa17.54■□□□□ 0.4
CCDC116-201ENST00000292779 CLIP2Q9UDT6 1046 aa17.54■□□□□ 0.4
CCDC116-201ENST00000292779 DOCK2Q92608 1830 aa17.53■□□□□ 0.4
CCDC116-201ENST00000292779 YEATS4O95619 227 aa17.53■□□□□ 0.4
CCDC116-201ENST00000292779 RXRAP19793 462 aa17.53■□□□□ 0.4
CCDC116-201ENST00000292779 METAP2P50579 478 aaKnown RBP eCLIP17.53■□□□□ 0.4
CCDC116-201ENST00000292779 AIFM3Q96NN9 605 aa17.53■□□□□ 0.4
CCDC116-201ENST00000292779 ANO10Q9NW15 660 aa17.53■□□□□ 0.4
CCDC116-201ENST00000292779 NEDD4P46934 1319 aa17.53■□□□□ 0.4
CCDC116-201ENST00000292779 SPTLC2O15270 562 aa17.52■□□□□ 0.4
CCDC116-201ENST00000292779 CAMTA2O94983 1202 aa17.52■□□□□ 0.4
CCDC116-201ENST00000292779 SLC5A1P13866 664 aa17.52■□□□□ 0.4
CCDC116-201ENST00000292779 RASGRF1Q13972 1273 aa17.52■□□□□ 0.4
CCDC116-201ENST00000292779 SARM1Q6SZW1 724 aa17.52■□□□□ 0.4
CCDC116-201ENST00000292779 ECM29Q5VYK3 1845 aa17.52■□□□□ 0.4
CCDC116-201ENST00000292779 CDC25BP30305 580 aa17.52■□□□□ 0.4
CCDC116-201ENST00000292779 APOA5Q6Q788 366 aa17.52■□□□□ 0.4
CCDC116-201ENST00000292779 SYNE3Q6ZMZ3 975 aa17.52■□□□□ 0.4
CCDC116-201ENST00000292779 DHX40Q8IX18 779 aaKnown RBP17.52■□□□□ 0.4
CCDC116-201ENST00000292779 PROM2Q8N271 834 aa17.52■□□□□ 0.4
CCDC116-201ENST00000292779 SDF4Q9BRK5 362 aa17.52■□□□□ 0.4
CCDC116-201ENST00000292779 INCENPQ9NQS7 918 aa17.52■□□□□ 0.4
CCDC116-201ENST00000292779 CDC27P30260 824 aa17.51■□□□□ 0.39
CCDC116-201ENST00000292779 MAGEB6Q8N7X4 407 aa17.51■□□□□ 0.39
CCDC116-201ENST00000292779 BECN2A8MW95 431 aa17.51■□□□□ 0.39
CCDC116-201ENST00000292779 CCDC144BQ3MJ40 725 aa17.51■□□□□ 0.39
CCDC116-201ENST00000292779 ANO1Q5XXA6 986 aa17.51■□□□□ 0.39
CCDC116-201ENST00000292779 CCDC144CPQ8IYA2 1237 aa17.51■□□□□ 0.39
CCDC116-201ENST00000292779 IGDCC4Q8TDY8 1250 aa17.51■□□□□ 0.39
CCDC116-201ENST00000292779 FBXW7Q969H0 707 aa17.51■□□□□ 0.39
CCDC116-201ENST00000292779 ALG1Q9BT22 464 aa17.51■□□□□ 0.39
CCDC116-201ENST00000292779 EPB41L4AQ9HCS5 686 aaPredicted RBP17.51■□□□□ 0.39
CCDC116-201ENST00000292779 NIP7Q9Y221 180 aaKnown RBP eCLIP17.51■□□□□ 0.39
CCDC116-201ENST00000292779 MBD4O95243 580 aa17.5■□□□□ 0.39
CCDC116-201ENST00000292779 MAP3K12Q12852 859 aa17.5■□□□□ 0.39
CCDC116-201ENST00000292779 ALX1Q15699 326 aa17.5■□□□□ 0.39
CCDC116-201ENST00000292779 MICU3Q86XE3 530 aa17.5■□□□□ 0.39
CCDC116-201ENST00000292779 IFNL3Q8IZI9 196 aa17.5■□□□□ 0.39
CCDC116-201ENST00000292779 PHKBQ93100 1093 aa17.5■□□□□ 0.39
CCDC116-201ENST00000292779 TMEM87BQ96K49 555 aa17.5■□□□□ 0.39
CCDC116-201ENST00000292779 PATL2C9JE40 543 aaKnown RBP17.5■□□□□ 0.39
CCDC116-201ENST00000292779 CDKL5O76039 1030 aa17.5■□□□□ 0.39
CCDC116-201ENST00000292779 CCDC152Q4G0S7 254 aa17.5■□□□□ 0.39
CCDC116-201ENST00000292779 PARP10Q53GL7 1025 aa17.5■□□□□ 0.39
CCDC116-201ENST00000292779 CEP57L1Q8IYX8 460 aa17.5■□□□□ 0.39
CCDC116-201ENST00000292779 LY9Q9HBG7 655 aa17.5■□□□□ 0.39
CCDC116-201ENST00000292779 BCORQ6W2J9 1755 aa17.49■□□□□ 0.39
CCDC116-201ENST00000292779 ZBTB43O43298 467 aa17.49■□□□□ 0.39
CCDC116-201ENST00000292779 NTSR2O95665 410 aa17.49■□□□□ 0.39
CCDC116-201ENST00000292779 CTDSPL2Q05D32 466 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms