RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 RBM8AQ9Y5S9 174 aaKnown RBP12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 DCAF8L1A6NGE4 600 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 CLNS1AP54105 237 aaKnown RBP12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 UBXN1Q04323 297 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 CCDC50Q8IVM0 306 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 CEP120Q8N960 986 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 RHPN1Q8TCX5 695 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 NKIRAS1Q9NYS0 192 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 TXNDC16Q9P2K2 825 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 GCP02774 474 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 HPDP32754 393 aaPredicted RBP12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 NUCB1Q02818 461 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 LMNTD2Q8IXW0 634 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 SMC1BQ8NDV3 1235 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 LRRC45Q96CN5 670 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 ERBB4Q15303 1308 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 LDHCP07864 332 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 INPP5BP32019 993 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 LRCH2Q5VUJ6 765 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 AFAP1L1Q8TED9 768 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 UBLCP1Q8WVY7 318 aaPredicted RBP12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 TMOD3Q9NYL9 352 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 MKRN1Q9UHC7 482 aaKnown RBP12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 PIK3C2BO00750 1634 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 INSRP06213 1382 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 TMEM94Q12767 1356 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 MPRIPQ6WCQ1 1025 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 ZBTB3Q9H5J0 574 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 SETBP1Q9Y6X0 1596 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 TRIM75PA6NK02 468 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 RIOK3O14730 519 aaKnown RBP12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 NEDD9Q14511 834 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 RTN1Q16799 776 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 CACNA2D3Q8IZS8 1091 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 NEK11Q8NG66 645 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 ESYT1Q9BSJ8 1104 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 MAP3K19Q56UN5 1328 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 GPTP24298 496 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 ATP11AP98196 1134 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 SLC4A8Q2Y0W8 1093 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 CFAP157Q5JU67 520 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 UBE3BQ7Z3V4 1068 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 NEXMIFQ5QGS0 1516 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 PPP1R7Q15435 360 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 CCDC122Q5T0U0 273 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 ZNF354CQ86Y25 554 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 KIAA1524Q8TCG1 905 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 TMEM51Q9NW97 253 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 MAP3K2Q9Y2U5 619 aa12.09□□□□□ -0.47
PKNOX1-201ENST00000291547 ZPR1O75312 459 aa12.08□□□□□ -0.48
PKNOX1-201ENST00000291547 CIB2O75838 187 aa12.08□□□□□ -0.48
PKNOX1-201ENST00000291547 MAP2K2P36507 400 aa12.08□□□□□ -0.48
PKNOX1-201ENST00000291547 CNPY4Q8N129 248 aa12.08□□□□□ -0.48
PKNOX1-201ENST00000291547 CABLES1Q8TDN4 633 aa12.08□□□□□ -0.48
PKNOX1-201ENST00000291547 BAG3O95817 575 aa12.08□□□□□ -0.48
PKNOX1-201ENST00000291547 MYCNP04198 464 aaPredicted RBP12.08□□□□□ -0.48
PKNOX1-201ENST00000291547 HDAC1Q13547 482 aaPredicted RBP12.08□□□□□ -0.48
PKNOX1-201ENST00000291547 Q6ZUG5 572 aa12.08□□□□□ -0.48
PKNOX1-201ENST00000291547 LAMC1P11047 1609 aa12.08□□□□□ -0.48
PKNOX1-201ENST00000291547 PI4KAP2A4QPH2 592 aa12.08□□□□□ -0.48
PKNOX1-201ENST00000291547 ATP2A2P16615 1042 aaKnown RBP12.08□□□□□ -0.48
PKNOX1-201ENST00000291547 PDE1AP54750 535 aa12.08□□□□□ -0.48
PKNOX1-201ENST00000291547 TMTC2Q8N394 836 aa12.08□□□□□ -0.48
PKNOX1-201ENST00000291547 PI4KAP1Q8N8J0 262 aa12.08□□□□□ -0.48
PKNOX1-201ENST00000291547 ATP5J2-PTCD1G3V325 749 aa12.08□□□□□ -0.48
PKNOX1-201ENST00000291547 FAM184BQ9ULE4 1060 aa12.08□□□□□ -0.48
PKNOX1-201ENST00000291547 ATP7BP35670 1465 aa12.07□□□□□ -0.48
PKNOX1-201ENST00000291547 RBSNQ9H1K0 784 aa12.07□□□□□ -0.48
PKNOX1-201ENST00000291547 SLAIN2Q9P270 581 aa12.07□□□□□ -0.48
PKNOX1-201ENST00000291547 MRPS9P82933 396 aaKnown RBP12.07□□□□□ -0.48
PKNOX1-201ENST00000291547 CNGA4Q8IV77 575 aa12.07□□□□□ -0.48
PKNOX1-201ENST00000291547 TMEM87AQ8NBN3 555 aa12.07□□□□□ -0.48
PKNOX1-201ENST00000291547 BAG1Q99933 345 aaPredicted RBP12.07□□□□□ -0.48
PKNOX1-201ENST00000291547 KRT23Q9C075 422 aa12.07□□□□□ -0.48
PKNOX1-201ENST00000291547 VCX3BQ9H321 246 aa12.07□□□□□ -0.48
PKNOX1-201ENST00000291547 ANTXR1Q9H6X2 564 aa12.07□□□□□ -0.48
PKNOX1-201ENST00000291547 MTUS1Q9ULD2 1270 aa12.07□□□□□ -0.48
PKNOX1-201ENST00000291547 POTEDQ86YR6 584 aa12.07□□□□□ -0.48
PKNOX1-201ENST00000291547 IMPG2Q9BZV3 1241 aa12.07□□□□□ -0.48
PKNOX1-201ENST00000291547 CABP5Q9NP86 173 aa12.07□□□□□ -0.48
PKNOX1-201ENST00000291547 FAM114A2Q9NRY5 505 aa12.07□□□□□ -0.48
PKNOX1-201ENST00000291547 SPATA31D1Q6ZQQ2 1576 aa12.07□□□□□ -0.48
PKNOX1-201ENST00000291547 ICE2Q659A1 982 aa12.06□□□□□ -0.48
PKNOX1-201ENST00000291547 ESR2Q92731 530 aa12.06□□□□□ -0.48
PKNOX1-201ENST00000291547 PCDHB15Q9Y5E8 787 aa12.06□□□□□ -0.48
PKNOX1-201ENST00000291547 FAM169AQ9Y6X4 670 aa12.06□□□□□ -0.48
PKNOX1-201ENST00000291547 SEPT14Q6ZU15 432 aa12.06□□□□□ -0.48
PKNOX1-201ENST00000291547 JAKMIP2Q96AA8 810 aa12.06□□□□□ -0.48
PKNOX1-201ENST00000291547 RABEP2Q9H5N1 569 aa12.06□□□□□ -0.48
PKNOX1-201ENST00000291547 MROH1Q8NDA8 1641 aa12.06□□□□□ -0.48
PKNOX1-201ENST00000291547 BICDL2A1A5D9 508 aa12.06□□□□□ -0.48
PKNOX1-201ENST00000291547 C6orf229H3BNL8 230 aa12.06□□□□□ -0.48
PKNOX1-201ENST00000291547 BUB1BO60566 1050 aaPredicted RBP12.06□□□□□ -0.48
PKNOX1-201ENST00000291547 GIGYF1O75420 1035 aaPredicted RBP12.06□□□□□ -0.48
PKNOX1-201ENST00000291547 HOXC9P31274 260 aa12.06□□□□□ -0.48
PKNOX1-201ENST00000291547 IFIT1BQ5T764 474 aaKnown RBP12.06□□□□□ -0.48
PKNOX1-201ENST00000291547 HEATR3Q7Z4Q2 680 aa12.06□□□□□ -0.48
PKNOX1-201ENST00000291547 PNMA8AQ86V59 439 aaPredicted RBP12.06□□□□□ -0.48
PKNOX1-201ENST00000291547 ARID4AP29374 1257 aaPredicted RBP12.06□□□□□ -0.48
PKNOX1-201ENST00000291547 INF2Q27J81 1249 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms