RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 ECE2O60344 883 aa11.48□□□□□ -0.57
LRTOMT-201ENST00000289488 MBD4O95243 580 aa11.48□□□□□ -0.57
LRTOMT-201ENST00000289488 RABEP1Q15276 862 aa11.48□□□□□ -0.57
LRTOMT-201ENST00000289488 TTLL5Q6EMB2 1281 aa11.48□□□□□ -0.57
LRTOMT-201ENST00000289488 LCORLQ8N3X6 602 aa11.48□□□□□ -0.57
LRTOMT-201ENST00000289488 FER1L6Q2WGJ9 1857 aa11.47□□□□□ -0.57
LRTOMT-201ENST00000289488 YDJCA8MPS7 323 aa11.47□□□□□ -0.57
LRTOMT-201ENST00000289488 PRKAB2O43741 272 aa11.47□□□□□ -0.57
LRTOMT-201ENST00000289488 NCLP19338 710 aaKnown RBP11.47□□□□□ -0.57
LRTOMT-201ENST00000289488 HSPA4P34932 840 aa11.47□□□□□ -0.57
LRTOMT-201ENST00000289488 DYNLL1P63167 89 aaKnown RBP11.47□□□□□ -0.57
LRTOMT-201ENST00000289488 KIAA2012Q0VF49 1180 aa11.47□□□□□ -0.57
LRTOMT-201ENST00000289488 UTP14CQ5TAP6 766 aaKnown RBP11.47□□□□□ -0.57
LRTOMT-201ENST00000289488 ZSCAN25Q6NSZ9 544 aa11.47□□□□□ -0.57
LRTOMT-201ENST00000289488 EYA3Q99504 573 aa11.47□□□□□ -0.57
LRTOMT-201ENST00000289488 LDHBP07195 334 aaKnown RBP11.47□□□□□ -0.57
LRTOMT-201ENST00000289488 NECTIN1Q15223 517 aa11.47□□□□□ -0.57
LRTOMT-201ENST00000289488 PDS5AQ29RF7 1337 aaKnown RBP11.47□□□□□ -0.57
LRTOMT-201ENST00000289488 LRRFIP1Q32MZ4 808 aaKnown RBP11.47□□□□□ -0.57
LRTOMT-201ENST00000289488 ADCK5Q3MIX3 580 aa11.47□□□□□ -0.57
LRTOMT-201ENST00000289488 NAA16Q6N069 864 aaPredicted RBP11.47□□□□□ -0.57
LRTOMT-201ENST00000289488 RTKN2Q8IZC4 609 aa11.47□□□□□ -0.57
LRTOMT-201ENST00000289488 WDR66Q8TBY9 1149 aa11.47□□□□□ -0.57
LRTOMT-201ENST00000289488 AIDAQ96BJ3 306 aa11.47□□□□□ -0.57
LRTOMT-201ENST00000289488 AATFQ9NY61 560 aaKnown RBP eCLIP11.47□□□□□ -0.57
LRTOMT-201ENST00000289488 BAZ2AQ9UIF9 1905 aaKnown RBP11.47□□□□□ -0.57
LRTOMT-201ENST00000289488 ADAMTSL1Q8N6G6 1762 aa11.46□□□□□ -0.57
LRTOMT-201ENST00000289488 NFKBIEO00221 500 aa11.46□□□□□ -0.57
LRTOMT-201ENST00000289488 CPA1P15085 419 aa11.46□□□□□ -0.57
LRTOMT-201ENST00000289488 CC2D2BQ6DHV5 1058 aa11.46□□□□□ -0.57
LRTOMT-201ENST00000289488 LRSAM1Q6UWE0 723 aa11.46□□□□□ -0.57
LRTOMT-201ENST00000289488 DZIP1Q86YF9 867 aaKnown RBP11.46□□□□□ -0.57
LRTOMT-201ENST00000289488 STRBPQ96SI9 672 aaKnown RBP11.46□□□□□ -0.57
LRTOMT-201ENST00000289488 CCDC94Q9BW85 323 aaPredicted RBP11.46□□□□□ -0.57
LRTOMT-201ENST00000289488 UPF3BQ9BZI7 483 aaKnown RBP11.46□□□□□ -0.57
LRTOMT-201ENST00000289488 SNX14Q9Y5W7 946 aa11.46□□□□□ -0.57
LRTOMT-201ENST00000289488 APPP05067 770 aa11.46□□□□□ -0.58
LRTOMT-201ENST00000289488 PRELPP51888 382 aa11.46□□□□□ -0.58
LRTOMT-201ENST00000289488 RASSF7Q02833 373 aa11.46□□□□□ -0.58
LRTOMT-201ENST00000289488 CREB3L3Q68CJ9 461 aa11.46□□□□□ -0.58
LRTOMT-201ENST00000289488 LARGE2Q8N3Y3 721 aa11.46□□□□□ -0.58
LRTOMT-201ENST00000289488 SDR42E1Q8WUS8 393 aa11.46□□□□□ -0.58
LRTOMT-201ENST00000289488 PSMD1Q99460 953 aa11.46□□□□□ -0.58
LRTOMT-201ENST00000289488 SYT17Q9BSW7 474 aa11.46□□□□□ -0.58
LRTOMT-201ENST00000289488 ZNF646O15015 1829 aaPredicted RBP11.45□□□□□ -0.58
LRTOMT-201ENST00000289488 SALL1Q9NSC2 1324 aa11.45□□□□□ -0.58
LRTOMT-201ENST00000289488 SMIM22K7EJ46 135 aa11.45□□□□□ -0.58
LRTOMT-201ENST00000289488 FGAP02671 866 aa11.45□□□□□ -0.58
LRTOMT-201ENST00000289488 CYP21A2P08686 494 aa11.45□□□□□ -0.58
LRTOMT-201ENST00000289488 HAND2P61296 217 aa11.45□□□□□ -0.58
LRTOMT-201ENST00000289488 PODNQ7Z5L7 613 aa11.45□□□□□ -0.58
LRTOMT-201ENST00000289488 RIOK1Q9BRS2 568 aaKnown RBP11.45□□□□□ -0.58
LRTOMT-201ENST00000289488 CWC22Q9HCG8 908 aaKnown RBP11.45□□□□□ -0.58
LRTOMT-201ENST00000289488 FAM205AQ6ZU69 1335 aa11.45□□□□□ -0.58
LRTOMT-201ENST00000289488 SLC27A2O14975 620 aa11.44□□□□□ -0.58
LRTOMT-201ENST00000289488 RAD17O75943 681 aa11.44□□□□□ -0.58
LRTOMT-201ENST00000289488 SCNN1DP51172 638 aa11.44□□□□□ -0.58
LRTOMT-201ENST00000289488 DMTNQ08495 405 aa11.44□□□□□ -0.58
LRTOMT-201ENST00000289488 GPT2Q8TD30 523 aa11.44□□□□□ -0.58
LRTOMT-201ENST00000289488 PCDHAC2Q9Y5I4 1007 aa11.44□□□□□ -0.58
LRTOMT-201ENST00000289488 MAGEB6P1A0A0J9YX57 407 aa11.44□□□□□ -0.58
LRTOMT-201ENST00000289488 TICAM2Q86XR7 235 aa11.44□□□□□ -0.58
LRTOMT-201ENST00000289488 KIAA0825Q8IV33 1275 aa11.44□□□□□ -0.58
LRTOMT-201ENST00000289488 TAOK3Q9H2K8 898 aa11.44□□□□□ -0.58
LRTOMT-201ENST00000289488 EPB41L4AQ9HCS5 686 aaPredicted RBP11.44□□□□□ -0.58
LRTOMT-201ENST00000289488 GSG1L2A8MUP6 293 aa11.43□□□□□ -0.58
LRTOMT-201ENST00000289488 MCCP23508 829 aa11.43□□□□□ -0.58
LRTOMT-201ENST00000289488 EVX2Q03828 476 aa11.43□□□□□ -0.58
LRTOMT-201ENST00000289488 SLC4A8Q2Y0W8 1093 aa11.43□□□□□ -0.58
LRTOMT-201ENST00000289488 DSCC1Q9BVC3 393 aa11.43□□□□□ -0.58
LRTOMT-201ENST00000289488 SLC4A4Q9Y6R1 1079 aa11.43□□□□□ -0.58
LRTOMT-201ENST00000289488 ARFGEF1Q9Y6D6 1849 aa11.43□□□□□ -0.58
LRTOMT-201ENST00000289488 MAST2Q6P0Q8 1798 aa11.43□□□□□ -0.58
LRTOMT-201ENST00000289488 IARSP41252 1262 aaKnown RBP11.43□□□□□ -0.58
LRTOMT-201ENST00000289488 DACT2Q5SW24 774 aa11.43□□□□□ -0.58
LRTOMT-201ENST00000289488 SPTY2D1Q68D10 685 aaPredicted RBP11.43□□□□□ -0.58
LRTOMT-201ENST00000289488 STK11IPQ8N1F8 1099 aa11.43□□□□□ -0.58
LRTOMT-201ENST00000289488 ZGPATQ8N5A5 531 aaKnown RBP11.43□□□□□ -0.58
LRTOMT-201ENST00000289488 SUPT20HQ8NEM7 779 aa11.43□□□□□ -0.58
LRTOMT-201ENST00000289488 TCEANC2Q96MN5 208 aa11.43□□□□□ -0.58
LRTOMT-201ENST00000289488 LARP6Q9BRS8 491 aaKnown RBP11.43□□□□□ -0.58
LRTOMT-201ENST00000289488 INCENPQ9NQS7 918 aa11.43□□□□□ -0.58
LRTOMT-201ENST00000289488 RBM27Q9P2N5 1060 aaKnown RBP11.43□□□□□ -0.58
LRTOMT-201ENST00000289488 TTF2Q9UNY4 1162 aaKnown RBP11.43□□□□□ -0.58
LRTOMT-201ENST00000289488 PRPF40AO75400 957 aaKnown RBP11.42□□□□□ -0.58
LRTOMT-201ENST00000289488 NEK4P51957 841 aa11.42□□□□□ -0.58
LRTOMT-201ENST00000289488 STOX1Q6ZVD7 989 aa11.42□□□□□ -0.58
LRTOMT-201ENST00000289488 NOL8Q76FK4 1167 aaKnown RBP11.42□□□□□ -0.58
LRTOMT-201ENST00000289488 MYRIPQ8NFW9 859 aa11.42□□□□□ -0.58
LRTOMT-201ENST00000289488 NKX2-3Q8TAU0 364 aa11.42□□□□□ -0.58
LRTOMT-201ENST00000289488 ZBTB12Q9Y330 459 aaPredicted RBP11.42□□□□□ -0.58
LRTOMT-201ENST00000289488 LAMA4Q16363 1823 aa11.42□□□□□ -0.58
LRTOMT-201ENST00000289488 CDK5RAP2Q96SN8 1893 aa11.42□□□□□ -0.58
LRTOMT-201ENST00000289488 USP17L3A6NCW0 530 aa11.42□□□□□ -0.58
LRTOMT-201ENST00000289488 USP17L4A6NCW7 530 aa11.42□□□□□ -0.58
LRTOMT-201ENST00000289488 CASTP20810 708 aaKnown RBP11.42□□□□□ -0.58
LRTOMT-201ENST00000289488 PKP1Q13835 747 aa11.42□□□□□ -0.58
LRTOMT-201ENST00000289488 SOGA3Q5TF21 947 aa11.42□□□□□ -0.58
LRTOMT-201ENST00000289488 STRIP1Q5VSL9 837 aa11.42□□□□□ -0.58
LRTOMT-201ENST00000289488 USP17L1Q7RTZ2 530 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms