RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 CREBRFQ8IUR6 639 aa10.06□□□□□ -0.8
PTPDC1-201ENST00000288976 CCAR1Q8IX12 1150 aaKnown RBP10.06□□□□□ -0.8
PTPDC1-201ENST00000288976 MAP4K1Q92918 833 aa10.06□□□□□ -0.8
PTPDC1-201ENST00000288976 OSBP2Q969R2 916 aa10.06□□□□□ -0.8
PTPDC1-201ENST00000288976 IQSEC3Q9UPP2 1182 aaPredicted RBP10.06□□□□□ -0.8
PTPDC1-201ENST00000288976 MAGEB6P1A0A0J9YX57 407 aa10.06□□□□□ -0.8
PTPDC1-201ENST00000288976 CYP7A1P22680 504 aa10.06□□□□□ -0.8
PTPDC1-201ENST00000288976 ZNF384Q8TF68 577 aa10.06□□□□□ -0.8
PTPDC1-201ENST00000288976 AIDAQ96BJ3 306 aa10.06□□□□□ -0.8
PTPDC1-201ENST00000288976 RIOK1Q9BRS2 568 aaKnown RBP10.06□□□□□ -0.8
PTPDC1-201ENST00000288976 ABCF2Q9UG63 623 aa10.06□□□□□ -0.8
PTPDC1-201ENST00000288976 GPR75-ASB3A0A0A6YYF3 556 aa10.05□□□□□ -0.8
PTPDC1-201ENST00000288976 BAG3O95817 575 aa10.05□□□□□ -0.8
PTPDC1-201ENST00000288976 GRM1Q13255 1194 aa10.05□□□□□ -0.8
PTPDC1-201ENST00000288976 CERS5Q8N5B7 392 aa10.05□□□□□ -0.8
PTPDC1-201ENST00000288976 GMLQ99445 158 aa10.05□□□□□ -0.8
PTPDC1-201ENST00000288976 NOL10Q9BSC4 688 aaKnown RBP10.05□□□□□ -0.8
PTPDC1-201ENST00000288976 YBX3P16989 372 aaKnown RBP eCLIP10.05□□□□□ -0.8
PTPDC1-201ENST00000288976 PRDX5P30044 214 aa10.05□□□□□ -0.8
PTPDC1-201ENST00000288976 PUS7LQ9H0K6 701 aaKnown RBP10.05□□□□□ -0.8
PTPDC1-201ENST00000288976 GPAA1O43292 621 aa10.05□□□□□ -0.8
PTPDC1-201ENST00000288976 NPM3O75607 178 aaKnown RBP10.05□□□□□ -0.8
PTPDC1-201ENST00000288976 APPP05067 770 aa10.05□□□□□ -0.8
PTPDC1-201ENST00000288976 RASSF7Q02833 373 aa10.05□□□□□ -0.8
PTPDC1-201ENST00000288976 TSGA10IPQ3SY00 556 aa10.05□□□□□ -0.8
PTPDC1-201ENST00000288976 CIAPIN1Q6FI81 312 aa10.05□□□□□ -0.8
PTPDC1-201ENST00000288976 ZNF589Q86UQ0 364 aaPredicted RBP10.05□□□□□ -0.8
PTPDC1-201ENST00000288976 STRBPQ96SI9 672 aaKnown RBP10.05□□□□□ -0.8
PTPDC1-201ENST00000288976 CTNNA3Q9UI47 895 aa10.05□□□□□ -0.8
PTPDC1-201ENST00000288976 HSPA4P34932 840 aa10.05□□□□□ -0.8
PTPDC1-201ENST00000288976 EIF6P56537 245 aaKnown RBP10.05□□□□□ -0.8
PTPDC1-201ENST00000288976 ZDHHC15Q96MV8 337 aa10.05□□□□□ -0.8
PTPDC1-201ENST00000288976 HDAC9Q9UKV0 1011 aa10.05□□□□□ -0.8
PTPDC1-201ENST00000288976 SCN4AP35499 1836 aa10.04□□□□□ -0.8
PTPDC1-201ENST00000288976 PATL2C9JE40 543 aaKnown RBP10.04□□□□□ -0.8
PTPDC1-201ENST00000288976 IL25Q9H293 177 aa10.04□□□□□ -0.8
PTPDC1-201ENST00000288976 PSMD14O00487 310 aa10.04□□□□□ -0.8
PTPDC1-201ENST00000288976 SEC24BO95487 1268 aa10.04□□□□□ -0.8
PTPDC1-201ENST00000288976 PRELPP51888 382 aa10.04□□□□□ -0.8
PTPDC1-201ENST00000288976 ADGRA1Q86SQ6 560 aa10.04□□□□□ -0.8
PTPDC1-201ENST00000288976 DPF2Q92785 391 aa10.04□□□□□ -0.8
PTPDC1-201ENST00000288976 C22orf23Q9BZE7 217 aa10.04□□□□□ -0.8
PTPDC1-201ENST00000288976 CRNKL1Q9BZJ0 848 aaKnown RBP10.04□□□□□ -0.8
PTPDC1-201ENST00000288976 ZNF280AP59817 542 aaPredicted RBP10.04□□□□□ -0.8
PTPDC1-201ENST00000288976 RNF20Q5VTR2 975 aa10.04□□□□□ -0.8
PTPDC1-201ENST00000288976 TEKT1Q969V4 418 aa10.04□□□□□ -0.8
PTPDC1-201ENST00000288976 ANO2Q9NQ90 1003 aa10.04□□□□□ -0.8
PTPDC1-201ENST00000288976 ROBO3Q96MS0 1386 aa10.04□□□□□ -0.8
PTPDC1-201ENST00000288976 MBD4O95243 580 aa10.03□□□□□ -0.8
PTPDC1-201ENST00000288976 HSPD1P10809 573 aaKnown RBP10.03□□□□□ -0.8
PTPDC1-201ENST00000288976 ARHGAP27Q6ZUM4 889 aa10.03□□□□□ -0.8
PTPDC1-201ENST00000288976 GPC2Q8N158 579 aa10.03□□□□□ -0.8
PTPDC1-201ENST00000288976 NACAP1Q9BZK3 213 aa10.03□□□□□ -0.8
PTPDC1-201ENST00000288976 ATP8A2Q9NTI2 1148 aa10.03□□□□□ -0.8
PTPDC1-201ENST00000288976 TTF2Q9UNY4 1162 aaKnown RBP10.03□□□□□ -0.8
PTPDC1-201ENST00000288976 DAGLAQ9Y4D2 1042 aa10.03□□□□□ -0.8
PTPDC1-201ENST00000288976 NECTIN1Q15223 517 aa10.03□□□□□ -0.8
PTPDC1-201ENST00000288976 LCORLQ8N3X6 602 aa10.03□□□□□ -0.8
PTPDC1-201ENST00000288976 PCP11498 1178 aaKnown RBP10.02□□□□□ -0.81
PTPDC1-201ENST00000288976 CRKP46108 304 aa10.02□□□□□ -0.81
PTPDC1-201ENST00000288976 CXCL9Q07325 125 aa10.02□□□□□ -0.81
PTPDC1-201ENST00000288976 KRT32Q14532 448 aa10.02□□□□□ -0.81
PTPDC1-201ENST00000288976 DDRGK1Q96HY6 314 aa10.02□□□□□ -0.81
PTPDC1-201ENST00000288976 ZBED3Q96IU2 234 aaPredicted RBP10.02□□□□□ -0.81
PTPDC1-201ENST00000288976 SEC62Q99442 399 aaKnown RBP10.02□□□□□ -0.81
PTPDC1-201ENST00000288976 ANAPC4Q9UJX5 808 aa10.02□□□□□ -0.81
PTPDC1-201ENST00000288976 MYH1P12882 1939 aa10.02□□□□□ -0.81
PTPDC1-201ENST00000288976 FOXP2O15409 715 aa10.02□□□□□ -0.81
PTPDC1-201ENST00000288976 BTDP43251 543 aa10.02□□□□□ -0.81
PTPDC1-201ENST00000288976 SBK1Q52WX2 424 aa10.02□□□□□ -0.81
PTPDC1-201ENST00000288976 TSHZ2Q9NRE2 1034 aa10.02□□□□□ -0.81
PTPDC1-201ENST00000288976 ARPP21Q9UBL0 812 aaPredicted RBP10.02□□□□□ -0.81
PTPDC1-201ENST00000288976 PTH1RQ03431 593 aa10.02□□□□□ -0.81
PTPDC1-201ENST00000288976 GRIK5Q16478 980 aa10.02□□□□□ -0.81
PTPDC1-201ENST00000288976 KCNQ5Q9NR82 932 aa10.02□□□□□ -0.81
PTPDC1-201ENST00000288976 FKBP1CQ5VVH2 108 aa10.01□□□□□ -0.81
PTPDC1-201ENST00000288976 TM6SF1Q9BZW5 370 aa10.01□□□□□ -0.81
PTPDC1-201ENST00000288976 ARMT1Q9H993 441 aa10.01□□□□□ -0.81
PTPDC1-201ENST00000288976 RBM8AQ9Y5S9 174 aaKnown RBP10.01□□□□□ -0.81
PTPDC1-201ENST00000288976 CCDC129Q6ZRS4 1044 aa10.01□□□□□ -0.81
PTPDC1-201ENST00000288976 SIPA1L1O43166 1804 aa10.01□□□□□ -0.81
PTPDC1-201ENST00000288976 WDR19Q8NEZ3 1342 aa10.01□□□□□ -0.81
PTPDC1-201ENST00000288976 GSG1L2A8MUP6 293 aa10.01□□□□□ -0.81
PTPDC1-201ENST00000288976 IBSPP21815 317 aaPredicted RBP10.01□□□□□ -0.81
PTPDC1-201ENST00000288976 MKRN1Q9UHC7 482 aaKnown RBP10.01□□□□□ -0.81
PTPDC1-201ENST00000288976 SLC4A4Q9Y6R1 1079 aa10.01□□□□□ -0.81
PTPDC1-201ENST00000288976 ZNF541Q9H0D2 1346 aa10.01□□□□□ -0.81
PTPDC1-201ENST00000288976 IFNL3Q8IZI9 196 aa10□□□□□ -0.81
PTPDC1-201ENST00000288976 ANP32EQ9BTT0 268 aa10□□□□□ -0.81
PTPDC1-201ENST00000288976 IDI2Q9BXS1 227 aa10□□□□□ -0.81
PTPDC1-201ENST00000288976 TCEAL9Q9UHQ7 104 aa10□□□□□ -0.81
PTPDC1-201ENST00000288976 SLC27A2O14975 620 aa10□□□□□ -0.81
PTPDC1-201ENST00000288976 USP17L8P0C7I0 530 aa10□□□□□ -0.81
PTPDC1-201ENST00000288976 ZKSCAN1P17029 563 aaPredicted RBP10□□□□□ -0.81
PTPDC1-201ENST00000288976 RHBDL3P58872 404 aa10□□□□□ -0.81
PTPDC1-201ENST00000288976 RABEP1Q15276 862 aa10□□□□□ -0.81
PTPDC1-201ENST00000288976 IMMTQ16891 758 aaKnown RBP10□□□□□ -0.81
PTPDC1-201ENST00000288976 DNTTIP2Q5QJE6 756 aaKnown RBP10□□□□□ -0.81
PTPDC1-201ENST00000288976 CREB3L3Q68CJ9 461 aa10□□□□□ -0.81
PTPDC1-201ENST00000288976 L3MBTL3Q96JM7 780 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms