RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 PSMA5P28066 241 aa12.18□□□□□ -0.46
ERCC3-201ENST00000285398 IFIT5Q13325 482 aaKnown RBP12.18□□□□□ -0.46
ERCC3-201ENST00000285398 PARP10Q53GL7 1025 aa12.18□□□□□ -0.46
ERCC3-201ENST00000285398 HSP90AB4PQ58FF6 505 aa12.18□□□□□ -0.46
ERCC3-201ENST00000285398 HELBQ8NG08 1087 aaPredicted RBP12.18□□□□□ -0.46
ERCC3-201ENST00000285398 UBXN4Q92575 508 aa12.18□□□□□ -0.46
ERCC3-201ENST00000285398 CWC15Q9P013 229 aaKnown RBP12.18□□□□□ -0.46
ERCC3-201ENST00000285398 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.18□□□□□ -0.461e-6■■■■□ 21.3
ERCC3-201ENST00000285398 NDUFB9Q9Y6M9 179 aa12.18□□□□□ -0.46
ERCC3-201ENST00000285398 TNS1Q9HBL0 1735 aaKnown RBP12.18□□□□□ -0.46
ERCC3-201ENST00000285398 PSDA5PKW4 1024 aaPredicted RBP12.18□□□□□ -0.46
ERCC3-201ENST00000285398 PDE8AO60658 829 aa12.18□□□□□ -0.46
ERCC3-201ENST00000285398 TPM1P09493 284 aa12.18□□□□□ -0.46
ERCC3-201ENST00000285398 ATG9AQ7Z3C6 839 aa12.18□□□□□ -0.46
ERCC3-201ENST00000285398 COPRSQ9NQ92 184 aa12.18□□□□□ -0.46
ERCC3-201ENST00000285398 CSF1RP07333 972 aa12.18□□□□□ -0.46
ERCC3-201ENST00000285398 KCNJ6P48051 423 aa12.18□□□□□ -0.46
ERCC3-201ENST00000285398 TIMM10P62072 90 aa12.18□□□□□ -0.46
ERCC3-201ENST00000285398 SF3B2Q13435 895 aaKnown RBP12.18□□□□□ -0.46
ERCC3-201ENST00000285398 PGBD1Q96JS3 809 aa12.18□□□□□ -0.46
ERCC3-201ENST00000285398 CREB3L3Q68CJ9 461 aa12.17□□□□□ -0.46
ERCC3-201ENST00000285398 SYT10Q6XYQ8 523 aa12.17□□□□□ -0.46
ERCC3-201ENST00000285398 KRBA2Q6ZNG9 492 aa12.17□□□□□ -0.46
ERCC3-201ENST00000285398 OSBPL5Q9H0X9 879 aaPredicted RBP12.17□□□□□ -0.46
ERCC3-201ENST00000285398 CFAP45Q9UL16 551 aa12.17□□□□□ -0.46
ERCC3-201ENST00000285398 CDHR2Q9BYE9 1310 aa12.17□□□□□ -0.46
ERCC3-201ENST00000285398 WTIPA6NIX2 430 aaPredicted RBP12.17□□□□□ -0.46
ERCC3-201ENST00000285398 POLR3GO15318 223 aaPredicted RBP12.17□□□□□ -0.46
ERCC3-201ENST00000285398 LDHAL6AQ6ZMR3 332 aa12.17□□□□□ -0.46
ERCC3-201ENST00000285398 C11orf57Q6ZUT1 292 aaPredicted RBP12.17□□□□□ -0.46
ERCC3-201ENST00000285398 CLASRPQ8N2M8 674 aaKnown RBP12.17□□□□□ -0.46
ERCC3-201ENST00000285398 CCDC150Q8NCX0 1101 aa12.17□□□□□ -0.46
ERCC3-201ENST00000285398 NEK11Q8NG66 645 aa12.17□□□□□ -0.46
ERCC3-201ENST00000285398 PPP1R13BQ96KQ4 1090 aa12.17□□□□□ -0.46
ERCC3-201ENST00000285398 SRRTQ9BXP5 876 aaKnown RBP12.17□□□□□ -0.46
ERCC3-201ENST00000285398 NAT10Q9H0A0 1025 aaKnown RBP12.17□□□□□ -0.46
ERCC3-201ENST00000285398 ANO10Q9NW15 660 aa12.17□□□□□ -0.46
ERCC3-201ENST00000285398 RBM8AQ9Y5S9 174 aaKnown RBP12.17□□□□□ -0.46
ERCC3-201ENST00000285398 PNPLA7Q6ZV29 1317 aa12.16□□□□□ -0.46
ERCC3-201ENST00000285398 CCP110O43303 1012 aa12.16□□□□□ -0.46
ERCC3-201ENST00000285398 DDR1Q08345 913 aa12.16□□□□□ -0.46
ERCC3-201ENST00000285398 E4F1Q66K89 784 aaPredicted RBP12.16□□□□□ -0.46
ERCC3-201ENST00000285398 CTR9Q6PD62 1173 aa12.16□□□□□ -0.46
ERCC3-201ENST00000285398 NEUROD6Q96NK8 337 aa12.16□□□□□ -0.46
ERCC3-201ENST00000285398 ALDH8A1Q9H2A2 487 aaPredicted RBP12.16□□□□□ -0.46
ERCC3-201ENST00000285398 PLA2G12BQ9BX93 195 aa12.16□□□□□ -0.46
ERCC3-201ENST00000285398 ORC3Q9UBD5 711 aaPredicted RBP12.16□□□□□ -0.46
ERCC3-201ENST00000285398 RSPH14Q9UHP6 348 aa12.16□□□□□ -0.46
ERCC3-201ENST00000285398 C4AP0C0L4 1744 aa12.15□□□□□ -0.46
ERCC3-201ENST00000285398 UBR3Q6ZT12 1888 aa12.15□□□□□ -0.46
ERCC3-201ENST00000285398 EYA2O00167 538 aa12.15□□□□□ -0.46
ERCC3-201ENST00000285398 IFIT2P09913 472 aaKnown RBP12.15□□□□□ -0.46
ERCC3-201ENST00000285398 TPTE2Q6XPS3 522 aa12.15□□□□□ -0.46
ERCC3-201ENST00000285398 CEP57L1Q8IYX8 460 aa12.15□□□□□ -0.46
ERCC3-201ENST00000285398 MNS1Q8NEH6 495 aa12.15□□□□□ -0.46
ERCC3-201ENST00000285398 MAP4K1Q92918 833 aa12.15□□□□□ -0.46
ERCC3-201ENST00000285398 CNNM1Q9NRU3 951 aa12.15□□□□□ -0.46
ERCC3-201ENST00000285398 ECHDC1Q9NTX5 307 aa12.15□□□□□ -0.46
ERCC3-201ENST00000285398 ANKRD36CQ5JPF3 1778 aa12.15□□□□□ -0.46
ERCC3-201ENST00000285398 COL4A1P02462 1669 aa12.15□□□□□ -0.46
ERCC3-201ENST00000285398 ANKRD18BA2A2Z9 1011 aa12.15□□□□□ -0.46
ERCC3-201ENST00000285398 TAF5LO75529 589 aa12.15□□□□□ -0.46
ERCC3-201ENST00000285398 ADRA2BP18089 450 aa12.15□□□□□ -0.46
ERCC3-201ENST00000285398 ZSCAN26Q16670 478 aa12.15□□□□□ -0.46
ERCC3-201ENST00000285398 CNBD1Q8NA66 436 aa12.15□□□□□ -0.46
ERCC3-201ENST00000285398 EVI5LQ96CN4 794 aa12.15□□□□□ -0.46
ERCC3-201ENST00000285398 DBNDD2Q9BQY9 259 aa12.15□□□□□ -0.46
ERCC3-201ENST00000285398 ZSCAN16Q9H4T2 348 aaPredicted RBP12.15□□□□□ -0.46
ERCC3-201ENST00000285398 YY1AP1Q9H869 796 aa12.15□□□□□ -0.46
ERCC3-201ENST00000285398 SNRKQ9NRH2 765 aa12.15□□□□□ -0.46
ERCC3-201ENST00000285398 SLC27A2O14975 620 aa12.14□□□□□ -0.47
ERCC3-201ENST00000285398 BAG6P46379 1132 aa12.14□□□□□ -0.47
ERCC3-201ENST00000285398 HOMER1Q86YM7 354 aa12.14□□□□□ -0.47
ERCC3-201ENST00000285398 DHX40Q8IX18 779 aaKnown RBP12.14□□□□□ -0.47
ERCC3-201ENST00000285398 EDC3Q96F86 508 aaKnown RBP12.14□□□□□ -0.47
ERCC3-201ENST00000285398 DBNLQ9UJU6 430 aaKnown RBP12.14□□□□□ -0.47
ERCC3-201ENST00000285398 CARMIL3Q8ND23 1372 aa12.14□□□□□ -0.47
ERCC3-201ENST00000285398 PHLPP2Q6ZVD8 1323 aa12.14□□□□□ -0.47
ERCC3-201ENST00000285398 SERPINB2P05120 415 aa12.14□□□□□ -0.47
ERCC3-201ENST00000285398 SFPQP23246 707 aaKnown RBP eCLIP12.14□□□□□ -0.47
ERCC3-201ENST00000285398 RESTQ13127 1097 aa12.14□□□□□ -0.47
ERCC3-201ENST00000285398 SLC15A2Q16348 729 aa12.14□□□□□ -0.47
ERCC3-201ENST00000285398 PRR5LQ6MZQ0 368 aa12.14□□□□□ -0.47
ERCC3-201ENST00000285398 BLOC1S2Q6QNY1 142 aa12.14□□□□□ -0.47
ERCC3-201ENST00000285398 CNPY4Q8N129 248 aa12.14□□□□□ -0.47
ERCC3-201ENST00000285398 CELF1Q92879 486 aaKnown RBP12.14□□□□□ -0.47
ERCC3-201ENST00000285398 GPATCH3Q96I76 525 aa12.14□□□□□ -0.47
ERCC3-201ENST00000285398 UBXN6Q9BZV1 441 aa12.14□□□□□ -0.47
ERCC3-201ENST00000285398 BCORQ6W2J9 1755 aa12.14□□□□□ -0.47
ERCC3-201ENST00000285398 TAF1P21675 1872 aa12.13□□□□□ -0.47
ERCC3-201ENST00000285398 EFCAB8A8MWE9 144 aa12.13□□□□□ -0.47
ERCC3-201ENST00000285398 MYO1CO00159 1063 aa12.13□□□□□ -0.47
ERCC3-201ENST00000285398 RPS6KB1P23443 525 aa12.13□□□□□ -0.47
ERCC3-201ENST00000285398 ETF1P62495 437 aaKnown RBP12.13□□□□□ -0.47
ERCC3-201ENST00000285398 COL9A3Q14050 684 aaPredicted RBP12.13□□□□□ -0.47
ERCC3-201ENST00000285398 TOB2Q14106 344 aaPredicted RBP12.13□□□□□ -0.47
ERCC3-201ENST00000285398 TNNI3KQ59H18 835 aa12.13□□□□□ -0.47
ERCC3-201ENST00000285398 CCDC158Q5M9N0 1113 aa12.13□□□□□ -0.47
ERCC3-201ENST00000285398 SMARCE1Q969G3 411 aa12.13□□□□□ -0.47
ERCC3-201ENST00000285398 FPGT-TNNI3KV9GXZ4 949 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms