RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 MYH2Q9UKX2 1941 aa22.59■■□□□ 1.21
PDLIM3-202ENST00000284770 RPAP1Q9BWH6 1393 aaPredicted RBP22.59■■□□□ 1.21
PDLIM3-202ENST00000284770 GSG1L2A8MUP6 293 aa22.58■■□□□ 1.21
PDLIM3-202ENST00000284770 PRKAB2O43741 272 aa22.58■■□□□ 1.21
PDLIM3-202ENST00000284770 APPP05067 770 aa22.58■■□□□ 1.21
PDLIM3-202ENST00000284770 BTDP43251 543 aa22.58■■□□□ 1.21
PDLIM3-202ENST00000284770 SERPINA10Q9UK55 444 aa22.58■■□□□ 1.21
PDLIM3-202ENST00000284770 FGAP02671 866 aa22.58■■□□□ 1.2
PDLIM3-202ENST00000284770 CRKP46108 304 aa22.58■■□□□ 1.2
PDLIM3-202ENST00000284770 ANAPC15P60006 121 aa22.58■■□□□ 1.2
PDLIM3-202ENST00000284770 ALX1Q15699 326 aa22.58■■□□□ 1.2
PDLIM3-202ENST00000284770 CREB3L3Q68CJ9 461 aa22.58■■□□□ 1.2
PDLIM3-202ENST00000284770 KCNB2Q92953 911 aa22.58■■□□□ 1.2
PDLIM3-202ENST00000284770 CRNKL1Q9BZJ0 848 aaKnown RBP22.58■■□□□ 1.2
PDLIM3-202ENST00000284770 CTNNA3Q9UI47 895 aa22.58■■□□□ 1.2
PDLIM3-202ENST00000284770 PALD1Q9ULE6 856 aa22.58■■□□□ 1.2
PDLIM3-202ENST00000284770 ZBTB12Q9Y330 459 aaPredicted RBP22.58■■□□□ 1.2
PDLIM3-202ENST00000284770 GRIN3BO60391 1043 aa22.57■■□□□ 1.2
PDLIM3-202ENST00000284770 PLCG2P16885 1265 aa22.57■■□□□ 1.2
PDLIM3-202ENST00000284770 RNF20Q5VTR2 975 aa22.57■■□□□ 1.2
PDLIM3-202ENST00000284770 IFNL3Q8IZI9 196 aa22.57■■□□□ 1.2
PDLIM3-202ENST00000284770 UTRNP46939 3433 aa22.56■■□□□ 1.2
PDLIM3-202ENST00000284770 SLC27A2O14975 620 aa22.56■■□□□ 1.2
PDLIM3-202ENST00000284770 IL17RAQ96F46 866 aa22.56■■□□□ 1.2
PDLIM3-202ENST00000284770 ZDHHC15Q96MV8 337 aa22.56■■□□□ 1.2
PDLIM3-202ENST00000284770 NACAP1Q9BZK3 213 aa22.56■■□□□ 1.2
PDLIM3-202ENST00000284770 ZMYM6O95789 1325 aa22.56■■□□□ 1.2
PDLIM3-202ENST00000284770 SBF1O95248 1867 aa22.56■■□□□ 1.2
PDLIM3-202ENST00000284770 SH3RF3Q8TEJ3 882 aaPredicted RBP22.55■■□□□ 1.2
PDLIM3-202ENST00000284770 SDR42E1Q8WUS8 393 aa22.55■■□□□ 1.2
PDLIM3-202ENST00000284770 EPB41L4AQ9HCS5 686 aaPredicted RBP22.55■■□□□ 1.2
PDLIM3-202ENST00000284770 ZKSCAN1P17029 563 aaPredicted RBP22.55■■□□□ 1.2
PDLIM3-202ENST00000284770 RPS12P25398 132 aaKnown RBP22.55■■□□□ 1.2
PDLIM3-202ENST00000284770 APOBEC3HQ6NTF7 200 aaKnown RBP22.55■■□□□ 1.2
PDLIM3-202ENST00000284770 GIMAP6Q6P9H5 292 aa22.55■■□□□ 1.2
PDLIM3-202ENST00000284770 RASEFQ8IZ41 740 aa22.55■■□□□ 1.2
PDLIM3-202ENST00000284770 OGFOD1Q8N543 542 aa22.55■■□□□ 1.2
PDLIM3-202ENST00000284770 HDAC9Q9UKV0 1011 aa22.55■■□□□ 1.2
PDLIM3-202ENST00000284770 SNX14Q9Y5W7 946 aa22.55■■□□□ 1.2
PDLIM3-202ENST00000284770 DICER1Q9UPY3 1922 aaKnown RBP22.54■■□□□ 1.2
PDLIM3-202ENST00000284770 USP17L8P0C7I0 530 aa22.54■■□□□ 1.2
PDLIM3-202ENST00000284770 RHBDL3P58872 404 aa22.54■■□□□ 1.2
PDLIM3-202ENST00000284770 NAPBQ9H115 298 aa22.54■■□□□ 1.2
PDLIM3-202ENST00000284770 ATP8A2Q9NTI2 1148 aa22.54■■□□□ 1.2
PDLIM3-202ENST00000284770 RNF181Q9P0P0 153 aa22.54■■□□□ 1.2
PDLIM3-202ENST00000284770 CYP21A2P08686 494 aa22.53■■□□□ 1.2
PDLIM3-202ENST00000284770 RBM5P52756 815 aaKnown RBP eCLIP22.53■■□□□ 1.2
PDLIM3-202ENST00000284770 TSGA10IPQ3SY00 556 aa22.53■■□□□ 1.2
PDLIM3-202ENST00000284770 ZNF541Q9H0D2 1346 aa22.53■■□□□ 1.2
PDLIM3-202ENST00000284770 TDO2P48775 406 aa22.53■■□□□ 1.2
PDLIM3-202ENST00000284770 MMP14P50281 582 aa22.53■■□□□ 1.2
PDLIM3-202ENST00000284770 IMMTQ16891 758 aaKnown RBP22.53■■□□□ 1.2
PDLIM3-202ENST00000284770 C9orf131Q5VYM1 1079 aa22.53■■□□□ 1.2
PDLIM3-202ENST00000284770 CFAP100Q494V2 611 aa22.52■■□□□ 1.2
PDLIM3-202ENST00000284770 DPF2Q92785 391 aa22.52■■□□□ 1.2
PDLIM3-202ENST00000284770 DCP1AQ9NPI6 582 aaPredicted RBP22.52■■□□□ 1.2
PDLIM3-202ENST00000284770 GJA3Q9Y6H8 435 aa22.52■■□□□ 1.2
PDLIM3-202ENST00000284770 TEX11Q8IYF3 940 aa22.51■■□□□ 1.19
PDLIM3-202ENST00000284770 USP40Q9NVE5 1235 aa22.51■■□□□ 1.19
PDLIM3-202ENST00000284770 MKRN1Q9UHC7 482 aaKnown RBP22.51■■□□□ 1.19
PDLIM3-202ENST00000284770 PCDHAC2Q9Y5I4 1007 aa22.51■■□□□ 1.19
PDLIM3-202ENST00000284770 ZNF213O14771 459 aa22.5■■□□□ 1.19
PDLIM3-202ENST00000284770 USP5P45974 858 aa22.5■■□□□ 1.19
PDLIM3-202ENST00000284770 CDC42EP5Q6NZY7 148 aa22.5■■□□□ 1.19
PDLIM3-202ENST00000284770 GPC2Q8N158 579 aa22.5■■□□□ 1.19
PDLIM3-202ENST00000284770 TGFBRAP1Q8WUH2 860 aa22.5■■□□□ 1.19
PDLIM3-202ENST00000284770 GMPSP49915 693 aaPredicted RBP22.5■■□□□ 1.19
PDLIM3-202ENST00000284770 TAF6LQ9Y6J9 622 aa22.5■■□□□ 1.19
PDLIM3-202ENST00000284770 ADAMTSL1Q8N6G6 1762 aa22.5■■□□□ 1.19
PDLIM3-202ENST00000284770 KRT32Q14532 448 aa22.49■■□□□ 1.19
PDLIM3-202ENST00000284770 RABEP1Q15276 862 aa22.49■■□□□ 1.19
PDLIM3-202ENST00000284770 MTMR14Q8NCE2 650 aa22.49■■□□□ 1.19
PDLIM3-202ENST00000284770 ZNF280AP59817 542 aaPredicted RBP22.48■■□□□ 1.19
PDLIM3-202ENST00000284770 HAND2P61296 217 aa22.48■■□□□ 1.19
PDLIM3-202ENST00000284770 DLGAP5Q15398 846 aa22.48■■□□□ 1.19
PDLIM3-202ENST00000284770 PRMT6Q96LA8 375 aaPredicted RBP22.48■■□□□ 1.19
PDLIM3-202ENST00000284770 SPDYE2BA6NHP3 402 aa22.48■■□□□ 1.19
PDLIM3-202ENST00000284770 WDHD1O75717 1129 aaPredicted RBP22.48■■□□□ 1.19
PDLIM3-202ENST00000284770 SPDYE6P0CI01 402 aa22.48■■□□□ 1.19
PDLIM3-202ENST00000284770 ADCK5Q3MIX3 580 aa22.48■■□□□ 1.19
PDLIM3-202ENST00000284770 CTR9Q6PD62 1173 aa22.48■■□□□ 1.19
PDLIM3-202ENST00000284770 TM6SF1Q9BZW5 370 aa22.48■■□□□ 1.19
PDLIM3-202ENST00000284770 MYOZ2Q9NPC6 264 aa22.47■■□□□ 1.19
PDLIM3-202ENST00000284770 MCM9Q9NXL9 1143 aa22.47■■□□□ 1.19
PDLIM3-202ENST00000284770 FLT1P17948 1338 aa22.46■■□□□ 1.19
PDLIM3-202ENST00000284770 USP17L12C9JPN9 530 aa22.46■■□□□ 1.19
PDLIM3-202ENST00000284770 USP17L21D6R901 530 aa22.46■■□□□ 1.19
PDLIM3-202ENST00000284770 PSMA5P28066 241 aa22.46■■□□□ 1.19
PDLIM3-202ENST00000284770 SBK1Q52WX2 424 aa22.46■■□□□ 1.19
PDLIM3-202ENST00000284770 MAPKAPK5Q8IW41 473 aa22.46■■□□□ 1.19
PDLIM3-202ENST00000284770 SNX21Q969T3 373 aa22.46■■□□□ 1.19
PDLIM3-202ENST00000284770 JAKMIP1Q96N16 626 aaKnown RBP22.46■■□□□ 1.19
PDLIM3-202ENST00000284770 TBC1D2Q9BYX2 928 aa22.46■■□□□ 1.19
PDLIM3-202ENST00000284770 ARPP21Q9UBL0 812 aaPredicted RBP22.46■■□□□ 1.19
PDLIM3-202ENST00000284770 CNOT7Q9UIV1 285 aaKnown RBP22.46■■□□□ 1.19
PDLIM3-202ENST00000284770 SHTN1A0MZ66 631 aa22.45■■□□□ 1.19
PDLIM3-202ENST00000284770 E7EWF7 191 aa22.45■■□□□ 1.19
PDLIM3-202ENST00000284770 PPARAQ07869 468 aa22.45■■□□□ 1.19
PDLIM3-202ENST00000284770 BECN1Q14457 450 aa22.45■■□□□ 1.19
PDLIM3-202ENST00000284770 MICALL2Q8IY33 904 aa22.45■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms