RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 MAGEB6P1A0A0J9YX57 407 aa21.04■□□□□ 0.96
CAPN1-201ENST00000279247 FDPSP14324 419 aaKnown RBP21.04■□□□□ 0.96
CAPN1-201ENST00000279247 LIG1P18858 919 aa21.04■□□□□ 0.96
CAPN1-201ENST00000279247 PHKBQ93100 1093 aa21.04■□□□□ 0.96
CAPN1-201ENST00000279247 AIFM3Q96NN9 605 aa21.04■□□□□ 0.96
CAPN1-201ENST00000279247 TSPY26PQ9H489 355 aa21.04■□□□□ 0.96
CAPN1-201ENST00000279247 ZSWIM5Q9P217 1185 aa21.04■□□□□ 0.96
CAPN1-201ENST00000279247 ANGEL1Q9UNK9 670 aaKnown RBP21.04■□□□□ 0.96
CAPN1-201ENST00000279247 IFIT3O14879 490 aaKnown RBP21.03■□□□□ 0.96
CAPN1-201ENST00000279247 RESTQ13127 1097 aa21.03■□□□□ 0.96
CAPN1-201ENST00000279247 NAA16Q6N069 864 aaPredicted RBP21.03■□□□□ 0.96
CAPN1-201ENST00000279247 MFSD6Q6ZSS7 791 aa21.03■□□□□ 0.96
CAPN1-201ENST00000279247 BICD2Q8TD16 824 aa21.03■□□□□ 0.96
CAPN1-201ENST00000279247 LLPHQ9BRT6 129 aaKnown RBP21.03■□□□□ 0.96
CAPN1-201ENST00000279247 PRDM1O75626 825 aa21.03■□□□□ 0.96
CAPN1-201ENST00000279247 POLR3DP05423 398 aaPredicted RBP21.03■□□□□ 0.96
CAPN1-201ENST00000279247 PRDX5P30044 214 aa21.03■□□□□ 0.96
CAPN1-201ENST00000279247 HIBADHP31937 336 aaKnown RBP21.03■□□□□ 0.96
CAPN1-201ENST00000279247 CCDC183Q5T5S1 534 aa21.03■□□□□ 0.96
CAPN1-201ENST00000279247 MSL1Q68DK7 614 aa21.02■□□□□ 0.96
CAPN1-201ENST00000279247 FBXO41Q8TF61 875 aa21.02■□□□□ 0.96
CAPN1-201ENST00000279247 LEO1Q8WVC0 666 aaPredicted RBP21.02■□□□□ 0.96
CAPN1-201ENST00000279247 CARMIL3Q8ND23 1372 aa21.02■□□□□ 0.96
CAPN1-201ENST00000279247 ZNF804BA4D1E1 1349 aa21.02■□□□□ 0.96
CAPN1-201ENST00000279247 EN1Q05925 392 aaPredicted RBP21.02■□□□□ 0.96
CAPN1-201ENST00000279247 C4BP0C0L5 1744 aa21.02■□□□□ 0.95
CAPN1-201ENST00000279247 METAP2P50579 478 aaKnown RBP eCLIP21.02■□□□□ 0.953e-8■■■■□ 23.9
CAPN1-201ENST00000279247 AATFQ9NY61 560 aaKnown RBP eCLIP21.02■□□□□ 0.956e-6■■■■■ 54.7
CAPN1-201ENST00000279247 KIF3AQ9Y496 699 aa21.02■□□□□ 0.95
CAPN1-201ENST00000279247 UBE2Q2LH0YL09 131 aa21.01■□□□□ 0.95
CAPN1-201ENST00000279247 GYS1P13807 737 aa21.01■□□□□ 0.95
CAPN1-201ENST00000279247 TM4SF1P30408 202 aa21.01■□□□□ 0.95
CAPN1-201ENST00000279247 PLCB2Q00722 1185 aa21.01■□□□□ 0.95
CAPN1-201ENST00000279247 EVX2Q03828 476 aa21.01■□□□□ 0.95
CAPN1-201ENST00000279247 AKNAD1Q5T1N1 836 aa21.01■□□□□ 0.95
CAPN1-201ENST00000279247 C8orf76Q96K31 380 aa21.01■□□□□ 0.95
CAPN1-201ENST00000279247 CMTR1Q8N1G2 835 aaKnown RBP21■□□□□ 0.95
CAPN1-201ENST00000279247 SCAND2PQ9GZW5 306 aaPredicted RBP21■□□□□ 0.95
CAPN1-201ENST00000279247 PRR5LQ6MZQ0 368 aa21■□□□□ 0.95
CAPN1-201ENST00000279247 CKAP2LQ8IYA6 745 aa21■□□□□ 0.95
CAPN1-201ENST00000279247 ZNF384Q8TF68 577 aa21■□□□□ 0.95
CAPN1-201ENST00000279247 RPGRQ92834 1020 aaKnown RBP21■□□□□ 0.95
CAPN1-201ENST00000279247 CHMP4CQ96CF2 233 aa21■□□□□ 0.95
CAPN1-201ENST00000279247 SH2B2O14492 632 aaPredicted RBP20.99■□□□□ 0.95
CAPN1-201ENST00000279247 MPNDQ8N594 471 aa20.99■□□□□ 0.95
CAPN1-201ENST00000279247 TAF1LQ8IZX4 1826 aa20.99■□□□□ 0.95
CAPN1-201ENST00000279247 LY75O60449 1722 aa20.99■□□□□ 0.95
CAPN1-201ENST00000279247 CDC27P30260 824 aa20.99■□□□□ 0.95
CAPN1-201ENST00000279247 APOA5Q6Q788 366 aa20.99■□□□□ 0.95
CAPN1-201ENST00000279247 NUP133Q8WUM0 1156 aa20.99■□□□□ 0.95
CAPN1-201ENST00000279247 DACT1Q9NYF0 836 aa20.99■□□□□ 0.95
CAPN1-201ENST00000279247 DHX16O60231 1041 aaKnown RBP20.99■□□□□ 0.95
CAPN1-201ENST00000279247 EZH2Q15910 746 aaKnown RBP20.99■□□□□ 0.95
CAPN1-201ENST00000279247 USP28Q96RU2 1077 aa20.99■□□□□ 0.95
CAPN1-201ENST00000279247 ZBTB43O43298 467 aa20.98■□□□□ 0.95
CAPN1-201ENST00000279247 MECOMQ03112 1051 aa20.98■□□□□ 0.95
CAPN1-201ENST00000279247 SLC27A3Q5K4L6 730 aa20.98■□□□□ 0.95
CAPN1-201ENST00000279247 SCN7AQ01118 1682 aa20.98■□□□□ 0.95
CAPN1-201ENST00000279247 CCDC69A6NI79 296 aa20.98■□□□□ 0.95
CAPN1-201ENST00000279247 GOLGA8AA7E2F4 631 aa20.98■□□□□ 0.95
CAPN1-201ENST00000279247 SERPINB2P05120 415 aa20.98■□□□□ 0.95
CAPN1-201ENST00000279247 FBXO33Q7Z6M2 555 aa20.98■□□□□ 0.95
CAPN1-201ENST00000279247 PGBD1Q96JS3 809 aa20.98■□□□□ 0.95
CAPN1-201ENST00000279247 ANKRD2Q9GZV1 360 aa20.98■□□□□ 0.95
CAPN1-201ENST00000279247 SALL1Q9NSC2 1324 aa20.98■□□□□ 0.95
CAPN1-201ENST00000279247 LAMB2P55268 1798 aa20.98■□□□□ 0.95
CAPN1-201ENST00000279247 PPARAQ07869 468 aa20.97■□□□□ 0.95
CAPN1-201ENST00000279247 DEFB132Q7Z7B7 95 aa20.97■□□□□ 0.95
CAPN1-201ENST00000279247 COL23A1Q86Y22 540 aaPredicted RBP20.97■□□□□ 0.95
CAPN1-201ENST00000279247 IGDCC4Q8TDY8 1250 aa20.97■□□□□ 0.95
CAPN1-201ENST00000279247 RRAGDQ9NQL2 400 aaPredicted RBP20.97■□□□□ 0.95
CAPN1-201ENST00000279247 SLC12A7Q9Y666 1083 aa20.97■□□□□ 0.95
CAPN1-201ENST00000279247 ARAP2Q8WZ64 1704 aa20.97■□□□□ 0.95
CAPN1-201ENST00000279247 CICQ96RK0 1608 aaPredicted RBP20.97■□□□□ 0.95
CAPN1-201ENST00000279247 ZSCAN16Q9H4T2 348 aaPredicted RBP20.97■□□□□ 0.95
CAPN1-201ENST00000279247 GNAT2P19087 354 aa20.96■□□□□ 0.95
CAPN1-201ENST00000279247 LY9Q9HBG7 655 aa20.96■□□□□ 0.95
CAPN1-201ENST00000279247 RANBP6O60518 1105 aaKnown RBP20.96■□□□□ 0.95
CAPN1-201ENST00000279247 PDIA4P13667 645 aaKnown RBP20.96■□□□□ 0.95
CAPN1-201ENST00000279247 ALX1Q15699 326 aa20.96■□□□□ 0.95
CAPN1-201ENST00000279247 CASZ1Q86V15 1759 aa20.96■□□□□ 0.95
CAPN1-201ENST00000279247 EVCP57679 992 aa20.96■□□□□ 0.95
CAPN1-201ENST00000279247 PNPLA7Q6ZV29 1317 aa20.95■□□□□ 0.94
CAPN1-201ENST00000279247 GRAPQ13588 217 aa20.95■□□□□ 0.94
CAPN1-201ENST00000279247 DZIP1Q86YF9 867 aaKnown RBP20.95■□□□□ 0.94
CAPN1-201ENST00000279247 GRAPLQ8TC17 118 aaPredicted RBP20.95■□□□□ 0.94
CAPN1-201ENST00000279247 RIOK1Q9BRS2 568 aaKnown RBP20.95■□□□□ 0.94
CAPN1-201ENST00000279247 NR1I2O75469 434 aa20.95■□□□□ 0.94
CAPN1-201ENST00000279247 PDGFDQ9GZP0 370 aaPredicted RBP20.95■□□□□ 0.94
CAPN1-201ENST00000279247 CFAP45Q9UL16 551 aa20.95■□□□□ 0.94
CAPN1-201ENST00000279247 DDR1Q08345 913 aa20.94■□□□□ 0.94
CAPN1-201ENST00000279247 NSUN4Q96CB9 384 aaKnown RBP20.94■□□□□ 0.94
CAPN1-201ENST00000279247 SLC26A6Q9BXS9 759 aa20.94■□□□□ 0.94
CAPN1-201ENST00000279247 ERICH2A1L162 156 aa20.94■□□□□ 0.94
CAPN1-201ENST00000279247 USP17L12C9JPN9 530 aa20.94■□□□□ 0.94
CAPN1-201ENST00000279247 USP17L21D6R901 530 aa20.94■□□□□ 0.94
CAPN1-201ENST00000279247 ME1P48163 572 aa20.94■□□□□ 0.94
CAPN1-201ENST00000279247 WTAPQ15007 396 aa20.94■□□□□ 0.94
CAPN1-201ENST00000279247 ILDR1Q86SU0 546 aaPredicted RBP20.94■□□□□ 0.94
CAPN1-201ENST00000279247 TMEM87BQ96K49 555 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms