RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 TRAF5O00463 557 aa22.82■■□□□ 1.24
CACNA1B-201ENST00000277549 PRPF6O94906 941 aaKnown RBP22.82■■□□□ 1.24
CACNA1B-201ENST00000277549 DNM1Q05193 864 aaKnown RBP22.82■■□□□ 1.24
CACNA1B-201ENST00000277549 LRMPQ12912 555 aa22.82■■□□□ 1.24
CACNA1B-201ENST00000277549 ZNF569Q5MCW4 686 aa22.82■■□□□ 1.24
CACNA1B-201ENST00000277549 TXKP42681 527 aa22.82■■□□□ 1.24
CACNA1B-201ENST00000277549 USP48Q86UV5 1035 aa22.82■■□□□ 1.24
CACNA1B-201ENST00000277549 ZSCAN22P10073 491 aaPredicted RBP22.82■■□□□ 1.24
CACNA1B-201ENST00000277549 ZHX1Q9UKY1 873 aaPredicted RBP22.82■■□□□ 1.24
CACNA1B-201ENST00000277549 PIK3AP1Q6ZUJ8 805 aa22.82■■□□□ 1.24
CACNA1B-201ENST00000277549 SYNJ2BP-COX16A0A087WUM0 186 aa22.81■■□□□ 1.24
CACNA1B-201ENST00000277549 MNAT1P51948 309 aa22.81■■□□□ 1.24
CACNA1B-201ENST00000277549 TBC1D2Q9BYX2 928 aa22.81■■□□□ 1.24
CACNA1B-201ENST00000277549 TRIM31Q9BZY9 425 aa22.81■■□□□ 1.24
CACNA1B-201ENST00000277549 COX16Q9P0S2 106 aa22.81■■□□□ 1.24
CACNA1B-201ENST00000277549 SMTNP53814 917 aa22.81■■□□□ 1.24
CACNA1B-201ENST00000277549 ITIH3Q06033 890 aa22.81■■□□□ 1.24
CACNA1B-201ENST00000277549 FAM89AQ96GI7 184 aa22.81■■□□□ 1.24
CACNA1B-201ENST00000277549 DTNBO60941 627 aa22.81■■□□□ 1.24
CACNA1B-201ENST00000277549 PLCG2P16885 1265 aa22.81■■□□□ 1.24
CACNA1B-201ENST00000277549 LONRF3Q496Y0 759 aa22.81■■□□□ 1.24
CACNA1B-201ENST00000277549 Q3C1V9 767 aa22.81■■□□□ 1.24
CACNA1B-201ENST00000277549 ANKRD2Q9GZV1 360 aa22.81■■□□□ 1.24
CACNA1B-201ENST00000277549 SEPT10Q9P0V9 454 aa22.81■■□□□ 1.24
CACNA1B-201ENST00000277549 CTAGE9A4FU28 777 aa22.81■■□□□ 1.24
CACNA1B-201ENST00000277549 PRDM1O75626 825 aa22.81■■□□□ 1.24
CACNA1B-201ENST00000277549 IGBP1P78318 339 aa22.81■■□□□ 1.24
CACNA1B-201ENST00000277549 DDX17Q92841 729 aaKnown RBP22.81■■□□□ 1.24
CACNA1B-201ENST00000277549 TMX3Q96JJ7 454 aa22.81■■□□□ 1.24
CACNA1B-201ENST00000277549 TACC3Q9Y6A5 838 aa22.81■■□□□ 1.24
CACNA1B-201ENST00000277549 ZSCAN23Q3MJ62 389 aa22.8■■□□□ 1.24
CACNA1B-201ENST00000277549 SKA2Q8WVK7 121 aaPredicted RBP22.8■■□□□ 1.24
CACNA1B-201ENST00000277549 RNF113AO15541 343 aaKnown RBP22.8■■□□□ 1.24
CACNA1B-201ENST00000277549 KIF22Q14807 665 aa22.8■■□□□ 1.24
CACNA1B-201ENST00000277549 RIOK1Q9BRS2 568 aaKnown RBP22.8■■□□□ 1.24
CACNA1B-201ENST00000277549 CACYBPQ9HB71 228 aaKnown RBP22.8■■□□□ 1.24
CACNA1B-201ENST00000277549 NOS1P29475 1434 aa22.8■■□□□ 1.24
CACNA1B-201ENST00000277549 MRPS27Q92552 414 aaKnown RBP22.8■■□□□ 1.24
CACNA1B-201ENST00000277549 GGA1Q9UJY5 639 aa22.8■■□□□ 1.24
CACNA1B-201ENST00000277549 TNFAIP3P21580 790 aa22.8■■□□□ 1.24
CACNA1B-201ENST00000277549 TTC21BQ7Z4L5 1316 aa22.8■■□□□ 1.24
CACNA1B-201ENST00000277549 SV2BQ7L1I2 683 aa22.8■■□□□ 1.24
CACNA1B-201ENST00000277549 KIF9Q9HAQ2 790 aa22.8■■□□□ 1.24
CACNA1B-201ENST00000277549 BZW2Q9Y6E2 419 aaKnown RBP22.8■■□□□ 1.24
CACNA1B-201ENST00000277549 ZBED4O75132 1171 aa22.8■■□□□ 1.24
CACNA1B-201ENST00000277549 RABEP2Q9H5N1 569 aa22.8■■□□□ 1.24
CACNA1B-201ENST00000277549 CFBP00751 764 aa22.79■■□□□ 1.24
CACNA1B-201ENST00000277549 SDSP20132 328 aa22.79■■□□□ 1.24
CACNA1B-201ENST00000277549 RDH13Q8NBN7 331 aa22.79■■□□□ 1.24
CACNA1B-201ENST00000277549 NSMCE1Q8WV22 266 aa22.79■■□□□ 1.24
CACNA1B-201ENST00000277549 CHMP6Q96FZ7 201 aa22.79■■□□□ 1.24
CACNA1B-201ENST00000277549 CCDC110Q8TBZ0 833 aa22.79■■□□□ 1.24
CACNA1B-201ENST00000277549 ABCF3Q9NUQ8 709 aa22.79■■□□□ 1.24
CACNA1B-201ENST00000277549 UBE2HP62256 183 aa22.79■■□□□ 1.24
CACNA1B-201ENST00000277549 NKTRP30414 1462 aaKnown RBP22.79■■□□□ 1.24
CACNA1B-201ENST00000277549 DAPK1P53355 1430 aa22.79■■□□□ 1.24
CACNA1B-201ENST00000277549 GOLGA6CA6NDK9 693 aa22.79■■□□□ 1.24
CACNA1B-201ENST00000277549 GOLGA6BA6NDN3 693 aa22.79■■□□□ 1.24
CACNA1B-201ENST00000277549 GOLGA6DP0CG33 693 aa22.79■■□□□ 1.24
CACNA1B-201ENST00000277549 CEP57Q86XR8 500 aa22.79■■□□□ 1.24
CACNA1B-201ENST00000277549 KIFAP3Q92845 792 aa22.79■■□□□ 1.24
CACNA1B-201ENST00000277549 SPATA17Q96L03 361 aa22.79■■□□□ 1.24
CACNA1B-201ENST00000277549 BICC1Q9H694 974 aaKnown RBP22.79■■□□□ 1.24
CACNA1B-201ENST00000277549 GOLGA6AQ9NYA3 693 aa22.79■■□□□ 1.24
CACNA1B-201ENST00000277549 APOL6Q9BWW8 343 aa22.78■■□□□ 1.24
CACNA1B-201ENST00000277549 ZSCAN16Q9H4T2 348 aaPredicted RBP22.78■■□□□ 1.24
CACNA1B-201ENST00000277549 MYO1AQ9UBC5 1043 aa22.78■■□□□ 1.24
CACNA1B-201ENST00000277549 ZNF594Q96JF6 807 aaPredicted RBP22.78■■□□□ 1.24
CACNA1B-201ENST00000277549 SH2D4AQ9H788 454 aa22.78■■□□□ 1.24
CACNA1B-201ENST00000277549 hCG_1642624A0A1W2PR95 340 aa22.78■■□□□ 1.24
CACNA1B-201ENST00000277549 B4E1Z4 1266 aa22.78■■□□□ 1.24
CACNA1B-201ENST00000277549 TCP10L2B9ZVM9 353 aa22.78■■□□□ 1.24
CACNA1B-201ENST00000277549 OATP04181 439 aa22.78■■□□□ 1.24
CACNA1B-201ENST00000277549 CCDC89Q8N998 374 aa22.78■■□□□ 1.24
CACNA1B-201ENST00000277549 SKILP12757 684 aa22.78■■□□□ 1.24
CACNA1B-201ENST00000277549 IL15P40933 162 aaPredicted RBP22.78■■□□□ 1.24
CACNA1B-201ENST00000277549 CTDSPL2Q05D32 466 aa22.78■■□□□ 1.24
CACNA1B-201ENST00000277549 DYMQ7RTS9 669 aa22.78■■□□□ 1.24
CACNA1B-201ENST00000277549 TAB3Q8N5C8 712 aaPredicted RBP22.78■■□□□ 1.24
CACNA1B-201ENST00000277549 KCNG4Q8TDN1 519 aa22.78■■□□□ 1.24
CACNA1B-201ENST00000277549 ANKFY1Q9P2R3 1169 aa22.78■■□□□ 1.24
CACNA1B-201ENST00000277549 GIPC1O14908 333 aa22.78■■□□□ 1.24
CACNA1B-201ENST00000277549 ZFYP08048 801 aaPredicted RBP22.78■■□□□ 1.24
CACNA1B-201ENST00000277549 CD19P15391 556 aa22.78■■□□□ 1.24
CACNA1B-201ENST00000277549 ARHGEF35A5YM69 484 aa22.77■■□□□ 1.24
CACNA1B-201ENST00000277549 GNA11P29992 359 aa22.77■■□□□ 1.24
CACNA1B-201ENST00000277549 UTP14CQ5TAP6 766 aaKnown RBP22.77■■□□□ 1.24
CACNA1B-201ENST00000277549 BICDL2A1A5D9 508 aa22.77■■□□□ 1.24
CACNA1B-201ENST00000277549 XRCC6P12956 609 aaKnown RBP eCLIP22.77■■□□□ 1.24
CACNA1B-201ENST00000277549 NIM1KQ8IY84 436 aa22.77■■□□□ 1.24
CACNA1B-201ENST00000277549 GTPBP4Q9BZE4 634 aaKnown RBP22.77■■□□□ 1.24
CACNA1B-201ENST00000277549 DACT1Q9NYF0 836 aa22.77■■□□□ 1.24
CACNA1B-201ENST00000277549 TRPC6Q9Y210 931 aa22.77■■□□□ 1.24
CACNA1B-201ENST00000277549 HPDP32754 393 aaPredicted RBP22.77■■□□□ 1.24
CACNA1B-201ENST00000277549 CEP85LQ5SZL2 805 aa22.77■■□□□ 1.24
CACNA1B-201ENST00000277549 LRRC43Q8N309 656 aa22.77■■□□□ 1.24
CACNA1B-201ENST00000277549 ANKS4BQ8N8V4 417 aa22.77■■□□□ 1.24
CACNA1B-201ENST00000277549 ADGRL1O94910 1474 aa22.77■■□□□ 1.23
CACNA1B-201ENST00000277549 FOXD4Q12950 439 aaPredicted RBP22.76■■□□□ 1.23
CACNA1B-201ENST00000277549 FAM193BQ96PV7 902 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms