RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 NCOA5Q9HCD5 579 aaKnown RBP13.37□□□□□ -0.27
SHPRH-201ENST00000275233 TBC1D7Q9P0N9 293 aa13.37□□□□□ -0.27
SHPRH-201ENST00000275233 TLDC2A0PJX2 215 aa13.37□□□□□ -0.27
SHPRH-201ENST00000275233 NCAPH2Q6IBW4 605 aa13.37□□□□□ -0.27
SHPRH-201ENST00000275233 CHMLP26374 656 aa13.37□□□□□ -0.27
SHPRH-201ENST00000275233 PRPHP41219 470 aa13.37□□□□□ -0.27
SHPRH-201ENST00000275233 TXKP42681 527 aa13.37□□□□□ -0.27
SHPRH-201ENST00000275233 BMS1Q14692 1282 aaKnown RBP13.37□□□□□ -0.27
SHPRH-201ENST00000275233 RAD51AP2Q09MP3 1159 aa13.37□□□□□ -0.27
SHPRH-201ENST00000275233 NOLC1Q14978 699 aaKnown RBP eCLIP13.37□□□□□ -0.27
SHPRH-201ENST00000275233 PLEKHM2Q8IWE5 1019 aa13.37□□□□□ -0.27
SHPRH-201ENST00000275233 LMBR1Q8WVP7 490 aa13.37□□□□□ -0.27
SHPRH-201ENST00000275233 LGR6Q9HBX8 967 aa13.37□□□□□ -0.27
SHPRH-201ENST00000275233 AGTPBP1Q9UPW5 1226 aa13.37□□□□□ -0.27
SHPRH-201ENST00000275233 DUOX2Q9NRD8 1548 aa13.37□□□□□ -0.27
SHPRH-201ENST00000275233 IRX5P78411 483 aaPredicted RBP13.37□□□□□ -0.27
SHPRH-201ENST00000275233 EAPPQ56P03 285 aaPredicted RBP13.37□□□□□ -0.27
SHPRH-201ENST00000275233 IP6K1Q92551 441 aa13.37□□□□□ -0.27
SHPRH-201ENST00000275233 KCNK9Q9NPC2 374 aa13.37□□□□□ -0.27
SHPRH-201ENST00000275233 KRT83P78385 493 aa13.36□□□□□ -0.27
SHPRH-201ENST00000275233 PPARDQ03181 441 aa13.36□□□□□ -0.27
SHPRH-201ENST00000275233 CCDC65Q8IXS2 484 aa13.36□□□□□ -0.27
SHPRH-201ENST00000275233 LARGE2Q8N3Y3 721 aa13.36□□□□□ -0.27
SHPRH-201ENST00000275233 TXNDC16Q9P2K2 825 aa13.36□□□□□ -0.27
SHPRH-201ENST00000275233 hCG_1642624A0A1W2PR95 340 aa13.36□□□□□ -0.27
SHPRH-201ENST00000275233 PUM3Q15397 648 aaKnown RBP13.36□□□□□ -0.27
SHPRH-201ENST00000275233 CCDC6Q16204 474 aa13.36□□□□□ -0.27
SHPRH-201ENST00000275233 ZNF790Q6PG37 636 aa13.36□□□□□ -0.27
SHPRH-201ENST00000275233 DPP8Q6V1X1 898 aaPredicted RBP13.36□□□□□ -0.27
SHPRH-201ENST00000275233 ORAI2Q96SN7 254 aa13.36□□□□□ -0.27
SHPRH-201ENST00000275233 MAP3K19Q56UN5 1328 aa13.36□□□□□ -0.27
SHPRH-201ENST00000275233 NOP56O00567 594 aaKnown RBP13.36□□□□□ -0.27
SHPRH-201ENST00000275233 KRT86O43790 486 aa13.36□□□□□ -0.27
SHPRH-201ENST00000275233 ZBTB16Q05516 673 aa13.36□□□□□ -0.27
SHPRH-201ENST00000275233 PPP1R21Q6ZMI0 780 aa13.36□□□□□ -0.27
SHPRH-201ENST00000275233 ARHGEF10LQ9HCE6 1279 aa13.36□□□□□ -0.27
SHPRH-201ENST00000275233 A0A1W2PP64 1363 aa13.36□□□□□ -0.27
SHPRH-201ENST00000275233 SH3BP5O60239 455 aa13.36□□□□□ -0.27
SHPRH-201ENST00000275233 CAVIN2O95810 425 aa13.36□□□□□ -0.27
SHPRH-201ENST00000275233 VPS16Q9H269 839 aa13.36□□□□□ -0.27
SHPRH-201ENST00000275233 FAM169AQ9Y6X4 670 aa13.36□□□□□ -0.27
SHPRH-201ENST00000275233 GPATCH11Q8N954 259 aa13.36□□□□□ -0.27
SHPRH-201ENST00000275233 GPHNQ9NQX3 736 aaPredicted RBP13.36□□□□□ -0.27
SHPRH-201ENST00000275233 V9GY48 417 aaPredicted RBP13.36□□□□□ -0.27
SHPRH-201ENST00000275233 EPB41P11171 864 aaKnown RBP13.35□□□□□ -0.27
SHPRH-201ENST00000275233 PDE4DQ08499 809 aa13.35□□□□□ -0.27
SHPRH-201ENST00000275233 DBNDD2Q9BQY9 259 aa13.35□□□□□ -0.27
SHPRH-201ENST00000275233 H0YIN7 160 aa13.35□□□□□ -0.27
SHPRH-201ENST00000275233 TNNI3KQ59H18 835 aa13.35□□□□□ -0.27
SHPRH-201ENST00000275233 WDR44Q5JSH3 913 aa13.35□□□□□ -0.27
SHPRH-201ENST00000275233 OTUD7AQ8TE49 926 aaPredicted RBP13.35□□□□□ -0.27
SHPRH-201ENST00000275233 ZHX1Q9UKY1 873 aaPredicted RBP13.35□□□□□ -0.27
SHPRH-201ENST00000275233 FPGT-TNNI3KV9GXZ4 949 aa13.35□□□□□ -0.27
SHPRH-201ENST00000275233 YTHDC2Q9H6S0 1430 aaKnown RBP13.35□□□□□ -0.27
SHPRH-201ENST00000275233 DDX12PQ92771 950 aa13.35□□□□□ -0.27
SHPRH-201ENST00000275233 ATP2A1O14983 1001 aa13.35□□□□□ -0.27
SHPRH-201ENST00000275233 CCDC77Q9BR77 488 aa13.35□□□□□ -0.27
SHPRH-201ENST00000275233 ARFGAP3Q9NP61 516 aa13.35□□□□□ -0.27
SHPRH-201ENST00000275233 SOS1Q07889 1333 aaPredicted RBP13.35□□□□□ -0.27
SHPRH-201ENST00000275233 DCTPP1Q9H773 170 aa13.35□□□□□ -0.27
SHPRH-201ENST00000275233 HELLSQ9NRZ9 838 aa13.35□□□□□ -0.27
SHPRH-201ENST00000275233 ODF2LQ9ULJ1 636 aa13.35□□□□□ -0.27
SHPRH-201ENST00000275233 IQUBQ8NA54 791 aa13.34□□□□□ -0.27
SHPRH-201ENST00000275233 PLBD2Q8NHP8 589 aa13.34□□□□□ -0.27
SHPRH-201ENST00000275233 LEO1Q8WVC0 666 aaPredicted RBP13.34□□□□□ -0.27
SHPRH-201ENST00000275233 FAM227BQ96M60 508 aa13.34□□□□□ -0.27
SHPRH-201ENST00000275233 NOC4LQ9BVI4 516 aaKnown RBP13.34□□□□□ -0.27
SHPRH-201ENST00000275233 ZMYND15Q9H091 742 aa13.34□□□□□ -0.27
SHPRH-201ENST00000275233 RSPH14Q9UHP6 348 aa13.34□□□□□ -0.27
SHPRH-201ENST00000275233 OTUD7BQ6GQQ9 843 aa13.34□□□□□ -0.27
SHPRH-201ENST00000275233 SYT10Q6XYQ8 523 aa13.34□□□□□ -0.27
SHPRH-201ENST00000275233 MSANTD4Q8NCY6 345 aa13.34□□□□□ -0.27
SHPRH-201ENST00000275233 TRIM6Q9C030 488 aaPredicted RBP13.34□□□□□ -0.27
SHPRH-201ENST00000275233 TEX14Q8IWB6 1497 aa13.34□□□□□ -0.27
SHPRH-201ENST00000275233 PDE8AO60658 829 aa13.34□□□□□ -0.27
SHPRH-201ENST00000275233 SH2D4AQ9H788 454 aa13.34□□□□□ -0.27
SHPRH-201ENST00000275233 MAPKAPK5Q8IW41 473 aa13.34□□□□□ -0.27
SHPRH-201ENST00000275233 KIFC2Q96AC6 838 aa13.34□□□□□ -0.27
SHPRH-201ENST00000275233 CARD14Q9BXL6 1004 aa13.34□□□□□ -0.27
SHPRH-201ENST00000275233 PPP2R5DQ14738 602 aa13.34□□□□□ -0.27
SHPRH-201ENST00000275233 CCDC117Q8IWD4 279 aaPredicted RBP13.34□□□□□ -0.27
SHPRH-201ENST00000275233 TGFBRAP1Q8WUH2 860 aa13.34□□□□□ -0.27
SHPRH-201ENST00000275233 UBLCP1Q8WVY7 318 aaPredicted RBP13.34□□□□□ -0.27
SHPRH-201ENST00000275233 SLC27A2O14975 620 aa13.34□□□□□ -0.27
SHPRH-201ENST00000275233 METTL22Q9BUU2 404 aaPredicted RBP13.34□□□□□ -0.27
SHPRH-201ENST00000275233 NSRP1Q9H0G5 558 aaKnown RBP13.34□□□□□ -0.27
SHPRH-201ENST00000275233 ITSN2Q9NZM3 1697 aa13.33□□□□□ -0.27
SHPRH-201ENST00000275233 CFAP58Q5T655 872 aa13.33□□□□□ -0.28
SHPRH-201ENST00000275233 APBA3O96018 575 aa13.33□□□□□ -0.28
SHPRH-201ENST00000275233 RPS6KB1P23443 525 aa13.33□□□□□ -0.28
SHPRH-201ENST00000275233 BRAPQ7Z569 592 aa13.33□□□□□ -0.28
SHPRH-201ENST00000275233 GOLGA1Q92805 767 aa13.33□□□□□ -0.28
SHPRH-201ENST00000275233 PHKBQ93100 1093 aa13.33□□□□□ -0.28
SHPRH-201ENST00000275233 DDX21Q9NR30 783 aaKnown RBP eCLIP13.33□□□□□ -0.28
SHPRH-201ENST00000275233 CALCOCO1Q9P1Z2 691 aa13.33□□□□□ -0.28
SHPRH-201ENST00000275233 ZEB2O60315 1214 aa13.33□□□□□ -0.28
SHPRH-201ENST00000275233 STRN3Q13033 797 aa13.33□□□□□ -0.28
SHPRH-201ENST00000275233 LUC7L2Q9Y383 392 aaKnown RBP13.33□□□□□ -0.28
SHPRH-201ENST00000275233 IVNS1ABPQ9Y6Y0 642 aa13.33□□□□□ -0.28
SHPRH-201ENST00000275233 EYA2O00167 538 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms