RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 ZFP91Q96JP5 570 aaPredicted RBP14.8□□□□□ -0.04
PRDM16-201ENST00000270722 TEX14Q8IWB6 1497 aa14.8□□□□□ -0.04
PRDM16-201ENST00000270722 EIF3DO15371 548 aaKnown RBP eCLIP14.79□□□□□ -0.04
PRDM16-201ENST00000270722 LGSNQ5TDP6 509 aa14.79□□□□□ -0.04
PRDM16-201ENST00000270722 KRT28Q7Z3Y7 464 aa14.79□□□□□ -0.04
PRDM16-201ENST00000270722 FERMT3Q86UX7 667 aa14.79□□□□□ -0.04
PRDM16-201ENST00000270722 NEK11Q8NG66 645 aa14.79□□□□□ -0.04
PRDM16-201ENST00000270722 TPX2Q9ULW0 747 aaKnown RBP14.79□□□□□ -0.04
PRDM16-201ENST00000270722 NKTRP30414 1462 aaKnown RBP14.79□□□□□ -0.04
PRDM16-201ENST00000270722 TRIM75PA6NK02 468 aa14.79□□□□□ -0.04
PRDM16-201ENST00000270722 RRAGBQ5VZM2 374 aa14.79□□□□□ -0.04
PRDM16-201ENST00000270722 MCM4P33991 863 aa14.79□□□□□ -0.04
PRDM16-201ENST00000270722 RASSF2P50749 326 aa14.79□□□□□ -0.04
PRDM16-201ENST00000270722 ZNF569Q5MCW4 686 aa14.79□□□□□ -0.04
PRDM16-201ENST00000270722 GPTP24298 496 aa14.79□□□□□ -0.04
PRDM16-201ENST00000270722 MIS12Q9H081 205 aa14.79□□□□□ -0.04
PRDM16-201ENST00000270722 CAMK4Q16566 473 aa14.79□□□□□ -0.04
PRDM16-201ENST00000270722 APLFQ8IW19 511 aaPredicted RBP14.79□□□□□ -0.04
PRDM16-201ENST00000270722 SYCE3A1L190 88 aa14.79□□□□□ -0.04
PRDM16-201ENST00000270722 UVSSAQ2YD98 709 aa14.79□□□□□ -0.04
PRDM16-201ENST00000270722 FAM8A1Q9UBU6 413 aa14.79□□□□□ -0.04
PRDM16-201ENST00000270722 HEATR3Q7Z4Q2 680 aa14.79□□□□□ -0.04
PRDM16-201ENST00000270722 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.79□□□□□ -0.04
PRDM16-201ENST00000270722 TNFAIP1Q13829 316 aa14.78□□□□□ -0.04
PRDM16-201ENST00000270722 PPP1R12CQ9BZL4 782 aa14.78□□□□□ -0.04
PRDM16-201ENST00000270722 ZNF644Q9H582 1327 aaPredicted RBP14.78□□□□□ -0.04
PRDM16-201ENST00000270722 SPECC1L-ADORA2AF8WAN1 911 aa14.78□□□□□ -0.04
PRDM16-201ENST00000270722 CYP7A1P22680 504 aa14.78□□□□□ -0.04
PRDM16-201ENST00000270722 ZNF165P49910 485 aa14.78□□□□□ -0.04
PRDM16-201ENST00000270722 RNF34Q969K3 372 aa14.78□□□□□ -0.04
PRDM16-201ENST00000270722 STK32BQ9NY57 414 aa14.78□□□□□ -0.04
PRDM16-201ENST00000270722 TFCP2L1Q9NZI6 479 aa14.78□□□□□ -0.04
PRDM16-201ENST00000270722 ERCC5P28715 1186 aaPredicted RBP14.78□□□□□ -0.04
PRDM16-201ENST00000270722 TNNC1P63316 161 aa14.78□□□□□ -0.04
PRDM16-201ENST00000270722 IRX1P78414 480 aaPredicted RBP14.78□□□□□ -0.04
PRDM16-201ENST00000270722 CCDC129Q6ZRS4 1044 aa14.78□□□□□ -0.04
PRDM16-201ENST00000270722 CDC37L1Q7L3B6 337 aa14.78□□□□□ -0.04
PRDM16-201ENST00000270722 HVCN1Q96D96 273 aa14.78□□□□□ -0.04
PRDM16-201ENST00000270722 VAV2P52735 878 aa14.78□□□□□ -0.04
PRDM16-201ENST00000270722 SEL1L2Q5TEA6 688 aa14.78□□□□□ -0.04
PRDM16-201ENST00000270722 TRIML1Q8N9V2 468 aa14.78□□□□□ -0.04
PRDM16-201ENST00000270722 CCDC42Q96M95 316 aa14.78□□□□□ -0.04
PRDM16-201ENST00000270722 SOS1Q07889 1333 aaPredicted RBP14.78□□□□□ -0.04
PRDM16-201ENST00000270722 WASLO00401 505 aaPredicted RBP14.78□□□□□ -0.04
PRDM16-201ENST00000270722 CTAGE15A4D2H0 777 aa14.77□□□□□ -0.04
PRDM16-201ENST00000270722 ATP5J2-PTCD1G3V325 749 aa14.77□□□□□ -0.04
PRDM16-201ENST00000270722 CTAGE8P0CG41 777 aa14.77□□□□□ -0.04
PRDM16-201ENST00000270722 PABPC4Q13310 644 aaKnown RBP eCLIP14.77□□□□□ -0.04
PRDM16-201ENST00000270722 PPP2R5AQ15172 486 aa14.77□□□□□ -0.04
PRDM16-201ENST00000270722 CTAGE4Q8IX94 777 aa14.77□□□□□ -0.04
PRDM16-201ENST00000270722 GFM2Q969S9 779 aaKnown RBP14.77□□□□□ -0.04
PRDM16-201ENST00000270722 AMOTL2Q9Y2J4 779 aa14.77□□□□□ -0.04
PRDM16-201ENST00000270722 DMTNQ08495 405 aa14.77□□□□□ -0.04
PRDM16-201ENST00000270722 STRN3Q13033 797 aa14.77□□□□□ -0.04
PRDM16-201ENST00000270722 ATL3Q6DD88 541 aa14.77□□□□□ -0.04
PRDM16-201ENST00000270722 ARMCX6Q7L4S7 300 aa14.77□□□□□ -0.04
PRDM16-201ENST00000270722 NBPF3Q9H094 633 aa14.77□□□□□ -0.04
PRDM16-201ENST00000270722 DYNC1I2Q13409 638 aaKnown RBP14.77□□□□□ -0.05
PRDM16-201ENST00000270722 ZCRB1Q8TBF4 217 aaKnown RBP14.77□□□□□ -0.05
PRDM16-201ENST00000270722 EPSTI1Q96J88 318 aa14.77□□□□□ -0.05
PRDM16-201ENST00000270722 XAB2Q9HCS7 855 aaKnown RBP14.77□□□□□ -0.05
PRDM16-201ENST00000270722 CPLX4Q7Z7G2 160 aa14.77□□□□□ -0.05
PRDM16-201ENST00000270722 RBM17Q96I25 401 aaKnown RBP14.77□□□□□ -0.05
PRDM16-201ENST00000270722 ACTN4O43707 911 aaKnown RBP14.77□□□□□ -0.05
PRDM16-201ENST00000270722 LDHBP07195 334 aaKnown RBP14.77□□□□□ -0.05
PRDM16-201ENST00000270722 ATRIPQ8WXE1 791 aa14.77□□□□□ -0.05
PRDM16-201ENST00000270722 ZBTB3Q9H5J0 574 aa14.77□□□□□ -0.05
PRDM16-201ENST00000270722 WDR7Q9Y4E6 1490 aa14.76□□□□□ -0.05
PRDM16-201ENST00000270722 NEDD9Q14511 834 aa14.76□□□□□ -0.05
PRDM16-201ENST00000270722 HAUS8Q9BT25 410 aa14.76□□□□□ -0.05
PRDM16-201ENST00000270722 NKIRAS1Q9NYS0 192 aa14.76□□□□□ -0.05
PRDM16-201ENST00000270722 IL16Q14005 1332 aa14.76□□□□□ -0.05
PRDM16-201ENST00000270722 DAPK3O43293 454 aa14.76□□□□□ -0.05
PRDM16-201ENST00000270722 EPB41P11171 864 aaKnown RBP14.76□□□□□ -0.05
PRDM16-201ENST00000270722 TRMT1LQ7Z2T5 733 aaKnown RBP14.76□□□□□ -0.05
PRDM16-201ENST00000270722 TMC6Q7Z403 805 aa14.76□□□□□ -0.05
PRDM16-201ENST00000270722 IWS1Q96ST2 819 aa14.76□□□□□ -0.05
PRDM16-201ENST00000270722 RIOK1Q9BRS2 568 aaKnown RBP14.76□□□□□ -0.05
PRDM16-201ENST00000270722 AZI2Q9H6S1 392 aa14.76□□□□□ -0.05
PRDM16-201ENST00000270722 MAP3K21Q5TCX8 1036 aa14.76□□□□□ -0.05
PRDM16-201ENST00000270722 CCDC26Q8TAB7 109 aa14.76□□□□□ -0.05
PRDM16-201ENST00000270722 OPTNQ96CV9 577 aa14.76□□□□□ -0.05
PRDM16-201ENST00000270722 MCTP2Q6DN12 878 aa14.76□□□□□ -0.05
PRDM16-201ENST00000270722 OTUD7BQ6GQQ9 843 aa14.76□□□□□ -0.05
PRDM16-201ENST00000270722 TMEM57Q8N5G2 664 aa14.76□□□□□ -0.05
PRDM16-201ENST00000270722 RAPGEF3O95398 923 aa14.76□□□□□ -0.05
PRDM16-201ENST00000270722 MAP3K2Q9Y2U5 619 aa14.76□□□□□ -0.05
PRDM16-201ENST00000270722 ALDH1L1O75891 902 aa14.76□□□□□ -0.05
PRDM16-201ENST00000270722 WDR46O15213 610 aaKnown RBP14.75□□□□□ -0.05
PRDM16-201ENST00000270722 ZNF131P52739 623 aa14.75□□□□□ -0.05
PRDM16-201ENST00000270722 PPP1R7Q15435 360 aa14.75□□□□□ -0.05
PRDM16-201ENST00000270722 CARD10Q9BWT7 1032 aa14.75□□□□□ -0.05
PRDM16-201ENST00000270722 RAD54L2Q9Y4B4 1467 aa14.75□□□□□ -0.05
PRDM16-201ENST00000270722 BASP1P80723 227 aaKnown RBP14.75□□□□□ -0.05
PRDM16-201ENST00000270722 ZNF449Q6P9G9 518 aa14.75□□□□□ -0.05
PRDM16-201ENST00000270722 AGTPBP1Q9UPW5 1226 aa14.75□□□□□ -0.05
PRDM16-201ENST00000270722 GABPAQ06546 454 aa14.75□□□□□ -0.05
PRDM16-201ENST00000270722 GNG11P61952 73 aa14.75□□□□□ -0.05
PRDM16-201ENST00000270722 SCINQ9Y6U3 715 aa14.75□□□□□ -0.05
PRDM16-201ENST00000270722 UBASH3AP57075 661 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms