RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 ECM29Q5VYK3 1845 aa27.2■■□□□ 1.94
RAB40B-201ENST00000269347 WDR19Q8NEZ3 1342 aa27.19■■□□□ 1.94
RAB40B-201ENST00000269347 NPHP1O15259 732 aa27.19■■□□□ 1.94
RAB40B-201ENST00000269347 KDM4AO75164 1064 aa27.19■■□□□ 1.94
RAB40B-201ENST00000269347 CDC27P30260 824 aa27.19■■□□□ 1.94
RAB40B-201ENST00000269347 LEO1Q8WVC0 666 aaPredicted RBP27.19■■□□□ 1.94
RAB40B-201ENST00000269347 LY9Q9HBG7 655 aa27.19■■□□□ 1.94
RAB40B-201ENST00000269347 ANGEL1Q9UNK9 670 aaKnown RBP27.19■■□□□ 1.94
RAB40B-201ENST00000269347 CYP2D7A0A087X1C5 515 aa27.19■■□□□ 1.94
RAB40B-201ENST00000269347 UBE2Q2LH0YL09 131 aa27.19■■□□□ 1.94
RAB40B-201ENST00000269347 LIG1P18858 919 aa27.19■■□□□ 1.94
RAB40B-201ENST00000269347 PRDX5P30044 214 aa27.19■■□□□ 1.94
RAB40B-201ENST00000269347 PGBD1Q96JS3 809 aa27.19■■□□□ 1.94
RAB40B-201ENST00000269347 GNL3LQ9NVN8 582 aaKnown RBP27.19■■□□□ 1.94
RAB40B-201ENST00000269347 TRDNQ13061 729 aa27.18■■□□□ 1.94
RAB40B-201ENST00000269347 CCDC144CPQ8IYA2 1237 aa27.18■■□□□ 1.94
RAB40B-201ENST00000269347 AIFM3Q96NN9 605 aa27.18■■□□□ 1.94
RAB40B-201ENST00000269347 ZKSCAN3Q9BRR0 538 aa27.18■■□□□ 1.94
RAB40B-201ENST00000269347 TDO2P48775 406 aa27.18■■□□□ 1.94
RAB40B-201ENST00000269347 HMGN5P82970 282 aaKnown RBP27.18■■□□□ 1.94
RAB40B-201ENST00000269347 DDR1Q08345 913 aa27.18■■□□□ 1.94
RAB40B-201ENST00000269347 RNF214Q8ND24 703 aa27.18■■□□□ 1.94
RAB40B-201ENST00000269347 HIBADHP31937 336 aaKnown RBP27.17■■□□□ 1.94
RAB40B-201ENST00000269347 CHAF1AQ13111 956 aaPredicted RBP27.17■■□□□ 1.94
RAB40B-201ENST00000269347 AKNAD1Q5T1N1 836 aa27.17■■□□□ 1.94
RAB40B-201ENST00000269347 FAM43AQ8N2R8 423 aa27.17■■□□□ 1.94
RAB40B-201ENST00000269347 NSUN4Q96CB9 384 aaKnown RBP27.17■■□□□ 1.94
RAB40B-201ENST00000269347 FAM217BQ9NTX9 383 aaPredicted RBP27.17■■□□□ 1.94
RAB40B-201ENST00000269347 MYH2Q9UKX2 1941 aa27.17■■□□□ 1.94
RAB40B-201ENST00000269347 MAGEB6P1A0A0J9YX57 407 aa27.16■■□□□ 1.94
RAB40B-201ENST00000269347 APOA5Q6Q788 366 aa27.16■■□□□ 1.94
RAB40B-201ENST00000269347 MECOMQ03112 1051 aa27.16■■□□□ 1.94
RAB40B-201ENST00000269347 CEBPZQ03701 1054 aaKnown RBP27.16■■□□□ 1.94
RAB40B-201ENST00000269347 NAA16Q6N069 864 aaPredicted RBP27.16■■□□□ 1.94
RAB40B-201ENST00000269347 AEBP2Q6ZN18 517 aaPredicted RBP27.16■■□□□ 1.94
RAB40B-201ENST00000269347 PDIA4P13667 645 aaKnown RBP27.15■■□□□ 1.94
RAB40B-201ENST00000269347 GRAPQ13588 217 aa27.15■■□□□ 1.94
RAB40B-201ENST00000269347 RRP12Q5JTH9 1297 aaKnown RBP27.15■■□□□ 1.94
RAB40B-201ENST00000269347 GRAPLQ8TC17 118 aaPredicted RBP27.15■■□□□ 1.94
RAB40B-201ENST00000269347 ELP1O95163 1332 aa27.15■■□□□ 1.94
RAB40B-201ENST00000269347 GRIK5Q16478 980 aa27.15■■□□□ 1.94
RAB40B-201ENST00000269347 CCDC183Q5T5S1 534 aa27.15■■□□□ 1.94
RAB40B-201ENST00000269347 SPATA32Q96LK8 384 aa27.15■■□□□ 1.94
RAB40B-201ENST00000269347 ANKRD2Q9GZV1 360 aa27.15■■□□□ 1.94
RAB40B-201ENST00000269347 SERPINB2P05120 415 aa27.14■■□□□ 1.94
RAB40B-201ENST00000269347 ADRA2BP18089 450 aa27.14■■□□□ 1.94
RAB40B-201ENST00000269347 STAG1Q8WVM7 1258 aa27.14■■□□□ 1.94
RAB40B-201ENST00000269347 PPARAQ07869 468 aa27.14■■□□□ 1.93
RAB40B-201ENST00000269347 TXNRD1Q16881 649 aa27.14■■□□□ 1.93
RAB40B-201ENST00000269347 GIMAP6Q6P9H5 292 aa27.14■■□□□ 1.93
RAB40B-201ENST00000269347 MICU3Q86XE3 530 aa27.14■■□□□ 1.93
RAB40B-201ENST00000269347 GNAT2P19087 354 aa27.13■■□□□ 1.93
RAB40B-201ENST00000269347 ORC3Q9UBD5 711 aaPredicted RBP27.13■■□□□ 1.93
RAB40B-201ENST00000269347 MINDY4BA8MYZ0 360 aa27.12■■□□□ 1.93
RAB40B-201ENST00000269347 ZNF827Q17R98 1081 aa27.12■■□□□ 1.93
RAB40B-201ENST00000269347 TMEM67Q5HYA8 995 aa27.12■■□□□ 1.93
RAB40B-201ENST00000269347 RANBP6O60518 1105 aaKnown RBP27.12■■□□□ 1.93
RAB40B-201ENST00000269347 NTRK3Q16288 839 aa27.12■■□□□ 1.93
RAB40B-201ENST00000269347 MFSD6Q6ZSS7 791 aa27.12■■□□□ 1.93
RAB40B-201ENST00000269347 PHKBQ93100 1093 aa27.12■■□□□ 1.93
RAB40B-201ENST00000269347 USP28Q96RU2 1077 aa27.12■■□□□ 1.93
RAB40B-201ENST00000269347 CRY2Q49AN0 593 aa27.11■■□□□ 1.93
RAB40B-201ENST00000269347 SLC27A3Q5K4L6 730 aa27.11■■□□□ 1.93
RAB40B-201ENST00000269347 SYAP1Q96A49 352 aaPredicted RBP27.11■■□□□ 1.93
RAB40B-201ENST00000269347 ZSCAN16Q9H4T2 348 aaPredicted RBP27.11■■□□□ 1.93
RAB40B-201ENST00000269347 ANKIB1Q9P2G1 1089 aa27.11■■□□□ 1.93
RAB40B-201ENST00000269347 KIF28PB7ZC32 967 aa27.11■■□□□ 1.93
RAB40B-201ENST00000269347 GPSM2P81274 684 aa27.11■■□□□ 1.93
RAB40B-201ENST00000269347 CCDC88AQ3V6T2 1871 aa27.11■■□□□ 1.93
RAB40B-201ENST00000269347 FUCA2Q9BTY2 467 aa27.11■■□□□ 1.93
RAB40B-201ENST00000269347 RRAGDQ9NQL2 400 aaPredicted RBP27.11■■□□□ 1.93
RAB40B-201ENST00000269347 AATFQ9NY61 560 aaKnown RBP eCLIP27.11■■□□□ 1.934e-8■■■■■ 70.4
RAB40B-201ENST00000269347 METAP2P50579 478 aaKnown RBP eCLIP27.1■■□□□ 1.93
RAB40B-201ENST00000269347 SGMS1Q86VZ5 419 aa27.1■■□□□ 1.93
RAB40B-201ENST00000269347 TMEM87BQ96K49 555 aa27.1■■□□□ 1.93
RAB40B-201ENST00000269347 NACAP1Q9BZK3 213 aa27.1■■□□□ 1.93
RAB40B-201ENST00000269347 SCAND2PQ9GZW5 306 aaPredicted RBP27.1■■□□□ 1.93
RAB40B-201ENST00000269347 TSPY26PQ9H489 355 aa27.1■■□□□ 1.93
RAB40B-201ENST00000269347 TOMM22Q9NS69 142 aa27.1■■□□□ 1.93
RAB40B-201ENST00000269347 POLRMTO00411 1230 aaKnown RBP27.09■■□□□ 1.93
RAB40B-201ENST00000269347 IFIT3O14879 490 aaKnown RBP27.09■■□□□ 1.93
RAB40B-201ENST00000269347 TAOK2Q9UL54 1235 aa27.09■■□□□ 1.93
RAB40B-201ENST00000269347 SEMA3EO15041 775 aa27.09■■□□□ 1.93
RAB40B-201ENST00000269347 CSPP1Q1MSJ5 1256 aa27.09■■□□□ 1.93
RAB40B-201ENST00000269347 ANKRD31Q8N7Z5 1873 aa27.08■■□□□ 1.93
RAB40B-201ENST00000269347 FBXO18Q8NFZ0 1043 aa27.08■■□□□ 1.93
RAB40B-201ENST00000269347 DUOX1Q9NRD9 1551 aa27.07■■□□□ 1.92
RAB40B-201ENST00000269347 MAST2Q6P0Q8 1798 aa27.07■■□□□ 1.92
RAB40B-201ENST00000269347 CPLX1O14810 134 aa27.07■■□□□ 1.92
RAB40B-201ENST00000269347 PRDM1O75626 825 aa27.07■■□□□ 1.92
RAB40B-201ENST00000269347 CAMK4Q16566 473 aa27.07■■□□□ 1.92
RAB40B-201ENST00000269347 PPP1R9BQ96SB3 815 aa27.07■■□□□ 1.92
RAB40B-201ENST00000269347 ZBTB43O43298 467 aa27.07■■□□□ 1.92
RAB40B-201ENST00000269347 LIFRP42702 1097 aa27.07■■□□□ 1.92
RAB40B-201ENST00000269347 CTR9Q6PD62 1173 aa27.07■■□□□ 1.92
RAB40B-201ENST00000269347 NFXL1Q6ZNB6 911 aa27.07■■□□□ 1.92
RAB40B-201ENST00000269347 C8orf76Q96K31 380 aa27.07■■□□□ 1.92
RAB40B-201ENST00000269347 PDS5AQ29RF7 1337 aaKnown RBP27.06■■□□□ 1.92
RAB40B-201ENST00000269347 NR1I2O75469 434 aa27.06■■□□□ 1.92
RAB40B-201ENST00000269347 CYP2D6P10635 497 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms