RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 SCRN1Q12765 414 aa13.65□□□□□ -0.22
SCAF11-201ENST00000266589 OLFM4Q6UX06 510 aa13.65□□□□□ -0.22
SCAF11-201ENST00000266589 GPHNQ9NQX3 736 aaPredicted RBP13.65□□□□□ -0.22
SCAF11-201ENST00000266589 AATFQ9NY61 560 aaKnown RBP eCLIP13.65□□□□□ -0.22
SCAF11-201ENST00000266589 B4E1Z4 1266 aa13.64□□□□□ -0.23
SCAF11-201ENST00000266589 H0YIN7 160 aa13.64□□□□□ -0.23
SCAF11-201ENST00000266589 MCTP1Q6DN14 999 aa13.64□□□□□ -0.23
SCAF11-201ENST00000266589 MPNDQ8N594 471 aa13.64□□□□□ -0.23
SCAF11-201ENST00000266589 PDGFDQ9GZP0 370 aaPredicted RBP13.64□□□□□ -0.23
SCAF11-201ENST00000266589 TMX4Q9H1E5 349 aaPredicted RBP13.64□□□□□ -0.23
SCAF11-201ENST00000266589 NAP1L2Q9ULW6 460 aaPredicted RBP13.64□□□□□ -0.23
SCAF11-201ENST00000266589 IGSF3O75054 1194 aa13.63□□□□□ -0.23
SCAF11-201ENST00000266589 PTMSP20962 102 aa13.63□□□□□ -0.23
SCAF11-201ENST00000266589 AKNAD1Q5T1N1 836 aa13.63□□□□□ -0.23
SCAF11-201ENST00000266589 STYK1Q6J9G0 422 aa13.63□□□□□ -0.23
SCAF11-201ENST00000266589 DPP8Q6V1X1 898 aaPredicted RBP13.63□□□□□ -0.23
SCAF11-201ENST00000266589 CYB5R4Q7L1T6 521 aa13.63□□□□□ -0.23
SCAF11-201ENST00000266589 NKX2-3Q8TAU0 364 aa13.63□□□□□ -0.23
SCAF11-201ENST00000266589 ZNF274Q96GC6 653 aaPredicted RBP13.63□□□□□ -0.23
SCAF11-201ENST00000266589 INCENPQ9NQS7 918 aa13.63□□□□□ -0.23
SCAF11-201ENST00000266589 LAMB1P07942 1786 aa13.63□□□□□ -0.23
SCAF11-201ENST00000266589 MYH2Q9UKX2 1941 aa13.63□□□□□ -0.23
SCAF11-201ENST00000266589 RIMBP2O15034 1052 aa13.63□□□□□ -0.23
SCAF11-201ENST00000266589 PPARAQ07869 468 aa13.63□□□□□ -0.23
SCAF11-201ENST00000266589 GRIK5Q16478 980 aa13.63□□□□□ -0.23
SCAF11-201ENST00000266589 MFSD6Q6ZSS7 791 aa13.63□□□□□ -0.23
SCAF11-201ENST00000266589 STAG1Q8WVM7 1258 aa13.63□□□□□ -0.23
SCAF11-201ENST00000266589 CNNM2Q9H8M5 875 aa13.63□□□□□ -0.23
SCAF11-201ENST00000266589 SLX4Q8IY92 1834 aa13.63□□□□□ -0.23
SCAF11-201ENST00000266589 MINDY4BA8MYZ0 360 aa13.62□□□□□ -0.23
SCAF11-201ENST00000266589 TRAK2O60296 914 aa13.62□□□□□ -0.23
SCAF11-201ENST00000266589 ZSCAN22P10073 491 aaPredicted RBP13.62□□□□□ -0.23
SCAF11-201ENST00000266589 PDIA3P30101 505 aaKnown RBP13.62□□□□□ -0.23
SCAF11-201ENST00000266589 EVCP57679 992 aa13.62□□□□□ -0.23
SCAF11-201ENST00000266589 CCT2P78371 535 aaKnown RBP13.62□□□□□ -0.23
SCAF11-201ENST00000266589 GSTO1P78417 241 aa13.62□□□□□ -0.23
SCAF11-201ENST00000266589 CHAMP1Q96JM3 812 aa13.62□□□□□ -0.23
SCAF11-201ENST00000266589 CRNKL1Q9BZJ0 848 aaKnown RBP13.62□□□□□ -0.23
SCAF11-201ENST00000266589 TACC3Q9Y6A5 838 aa13.62□□□□□ -0.23
SCAF11-201ENST00000266589 JAK2O60674 1132 aa13.62□□□□□ -0.23
SCAF11-201ENST00000266589 CHRNA5P30532 468 aa13.62□□□□□ -0.23
SCAF11-201ENST00000266589 GIMAP6Q6P9H5 292 aa13.62□□□□□ -0.23
SCAF11-201ENST00000266589 KRT23Q9C075 422 aa13.62□□□□□ -0.23
SCAF11-201ENST00000266589 COA1Q9GZY4 146 aa13.62□□□□□ -0.23
SCAF11-201ENST00000266589 KLF18A0A0U1RQI7 1052 aa13.61□□□□□ -0.23
SCAF11-201ENST00000266589 VPS37CA5D8V6 355 aaPredicted RBP13.61□□□□□ -0.23
SCAF11-201ENST00000266589 KDM4AO75164 1064 aa13.61□□□□□ -0.23
SCAF11-201ENST00000266589 DIXDC1Q155Q3 683 aa13.61□□□□□ -0.23
SCAF11-201ENST00000266589 RRP12Q5JTH9 1297 aaKnown RBP13.61□□□□□ -0.23
SCAF11-201ENST00000266589 LARP1BQ659C4 914 aaKnown RBP13.61□□□□□ -0.23
SCAF11-201ENST00000266589 STK11IPQ8N1F8 1099 aa13.61□□□□□ -0.23
SCAF11-201ENST00000266589 LLPHQ9BRT6 129 aaKnown RBP13.61□□□□□ -0.23
SCAF11-201ENST00000266589 ZC3H12CQ9C0D7 883 aaKnown RBP13.61□□□□□ -0.23
SCAF11-201ENST00000266589 RNF41Q9H4P4 317 aaPredicted RBP13.61□□□□□ -0.23
SCAF11-201ENST00000266589 NCOA5Q9HCD5 579 aaKnown RBP13.61□□□□□ -0.23
SCAF11-201ENST00000266589 TOMM22Q9NS69 142 aa13.61□□□□□ -0.23
SCAF11-201ENST00000266589 ANAPC4Q9UJX5 808 aa13.61□□□□□ -0.23
SCAF11-201ENST00000266589 BRPF3Q9ULD4 1205 aa13.61□□□□□ -0.23
SCAF11-201ENST00000266589 ANGEL1Q9UNK9 670 aaKnown RBP13.61□□□□□ -0.23
SCAF11-201ENST00000266589 MTMR6Q9Y217 621 aa13.61□□□□□ -0.23
SCAF11-201ENST00000266589 GOLGA8BA8MQT2 603 aa13.6□□□□□ -0.23
SCAF11-201ENST00000266589 SH2B2O14492 632 aaPredicted RBP13.6□□□□□ -0.23
SCAF11-201ENST00000266589 F13A1P00488 732 aa13.6□□□□□ -0.23
SCAF11-201ENST00000266589 PDCP20941 246 aa13.6□□□□□ -0.23
SCAF11-201ENST00000266589 MFSD14BQ5SR56 506 aa13.6□□□□□ -0.23
SCAF11-201ENST00000266589 NSUN7Q8NE18 718 aaKnown RBP13.6□□□□□ -0.23
SCAF11-201ENST00000266589 TBC1D22AQ8WUA7 517 aa13.6□□□□□ -0.23
SCAF11-201ENST00000266589 TMEM87BQ96K49 555 aa13.6□□□□□ -0.23
SCAF11-201ENST00000266589 MROH7-TTC4A0A0A0MT08 1334 aa13.6□□□□□ -0.23
SCAF11-201ENST00000266589 FAM205AQ6ZU69 1335 aa13.6□□□□□ -0.23
SCAF11-201ENST00000266589 DLEC1Q9Y238 1755 aa13.6□□□□□ -0.23
SCAF11-201ENST00000266589 CYP2D7A0A087X1C5 515 aa13.6□□□□□ -0.23
SCAF11-201ENST00000266589 FOXD4L6Q3SYB3 417 aaPredicted RBP13.6□□□□□ -0.23
SCAF11-201ENST00000266589 FOXD4L3Q6VB84 417 aaPredicted RBP13.6□□□□□ -0.23
SCAF11-201ENST00000266589 SMARCC2Q8TAQ2 1214 aa13.6□□□□□ -0.23
SCAF11-201ENST00000266589 DCP1AQ9NPI6 582 aaPredicted RBP13.6□□□□□ -0.23
SCAF11-201ENST00000266589 ATP8A2Q9NTI2 1148 aa13.6□□□□□ -0.23
SCAF11-201ENST00000266589 ZSWIM5Q9P217 1185 aa13.6□□□□□ -0.23
SCAF11-201ENST00000266589 NAV1Q8NEY1 1877 aa13.59□□□□□ -0.23
SCAF11-201ENST00000266589 SMIM22K7EJ46 135 aa13.59□□□□□ -0.23
SCAF11-201ENST00000266589 CTDNEP1O95476 244 aa13.59□□□□□ -0.23
SCAF11-201ENST00000266589 LDHCP07864 332 aa13.59□□□□□ -0.23
SCAF11-201ENST00000266589 PDIA4P13667 645 aaKnown RBP13.59□□□□□ -0.23
SCAF11-201ENST00000266589 GTF2IP78347 998 aa13.59□□□□□ -0.23
SCAF11-201ENST00000266589 CTR9Q6PD62 1173 aa13.59□□□□□ -0.23
SCAF11-201ENST00000266589 CNKSR1Q969H4 720 aa13.59□□□□□ -0.23
SCAF11-201ENST00000266589 CHMP4CQ96CF2 233 aa13.59□□□□□ -0.23
SCAF11-201ENST00000266589 DDX11Q96FC9 970 aa13.59□□□□□ -0.23
SCAF11-201ENST00000266589 EYA3Q99504 573 aa13.59□□□□□ -0.23
SCAF11-201ENST00000266589 NOL10Q9BSC4 688 aaKnown RBP13.59□□□□□ -0.23
SCAF11-201ENST00000266589 C10orf71Q711Q0 1435 aa13.59□□□□□ -0.23
SCAF11-201ENST00000266589 PTPDC1A2A3K4 754 aa13.59□□□□□ -0.23
SCAF11-201ENST00000266589 USP17L12C9JPN9 530 aa13.59□□□□□ -0.23
SCAF11-201ENST00000266589 USP17L21D6R901 530 aa13.59□□□□□ -0.23
SCAF11-201ENST00000266589 BAG3O95817 575 aa13.59□□□□□ -0.23
SCAF11-201ENST00000266589 TMEM67Q5HYA8 995 aa13.59□□□□□ -0.23
SCAF11-201ENST00000266589 RAB11FIP4Q86YS3 637 aa13.59□□□□□ -0.23
SCAF11-201ENST00000266589 IGDCC4Q8TDY8 1250 aa13.59□□□□□ -0.23
SCAF11-201ENST00000266589 FBXW7Q969H0 707 aa13.59□□□□□ -0.23
SCAF11-201ENST00000266589 LMBRD1Q9NUN5 540 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms