RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 SAP30BPQ9UHR5 308 aaKnown RBP16.9■□□□□ 0.3
NID1-201ENST00000264187 BEND3Q5T5X7 828 aa16.9■□□□□ 0.3
NID1-201ENST00000264187 KSR1Q8IVT5 923 aa16.9■□□□□ 0.3
NID1-201ENST00000264187 IGSF22Q8N9C0 903 aa16.9■□□□□ 0.3
NID1-201ENST00000264187 PRG4Q92954 1404 aaPredicted RBP16.9■□□□□ 0.3
NID1-201ENST00000264187 PCDHB15Q9Y5E8 787 aa16.9■□□□□ 0.3
NID1-201ENST00000264187 CAMSAP2Q08AD1 1489 aa16.9■□□□□ 0.3
NID1-201ENST00000264187 EPB41P11171 864 aaKnown RBP16.9■□□□□ 0.3
NID1-201ENST00000264187 FCHSD1Q86WN1 690 aa16.9■□□□□ 0.3
NID1-201ENST00000264187 OGFRQ9NZT2 677 aa16.9■□□□□ 0.3
NID1-201ENST00000264187 RTL9Q8NET4 1388 aa16.89■□□□□ 0.29
NID1-201ENST00000264187 MAN1A1P33908 653 aa16.89■□□□□ 0.29
NID1-201ENST00000264187 SV2BQ7L1I2 683 aa16.89■□□□□ 0.29
NID1-201ENST00000264187 ZNF804AQ7Z570 1209 aa16.89■□□□□ 0.29
NID1-201ENST00000264187 KLHL7Q8IXQ5 586 aa16.89■□□□□ 0.29
NID1-201ENST00000264187 A0A1B0GUL7 405 aa16.89■□□□□ 0.29
NID1-201ENST00000264187 WASLO00401 505 aaPredicted RBP16.89■□□□□ 0.29
NID1-201ENST00000264187 NSFL1CQ9UNZ2 370 aaKnown RBP16.89■□□□□ 0.29
NID1-201ENST00000264187 A0A1B0GUA9 196 aa16.89■□□□□ 0.29
NID1-201ENST00000264187 ATP5DP30049 168 aa16.89■□□□□ 0.29
NID1-201ENST00000264187 DIXDC1Q155Q3 683 aa16.89■□□□□ 0.29
NID1-201ENST00000264187 GPCPD1Q9NPB8 672 aa16.89■□□□□ 0.29
NID1-201ENST00000264187 GIPC1O14908 333 aa16.89■□□□□ 0.29
NID1-201ENST00000264187 RPL13P26373 211 aaKnown RBP16.89■□□□□ 0.29
NID1-201ENST00000264187 EIF6P56537 245 aaKnown RBP16.89■□□□□ 0.29
NID1-201ENST00000264187 PDE4DQ08499 809 aa16.89■□□□□ 0.29
NID1-201ENST00000264187 LRRC43Q8N309 656 aa16.89■□□□□ 0.29
NID1-201ENST00000264187 UTP11Q9Y3A2 253 aaKnown RBP16.89■□□□□ 0.29
NID1-201ENST00000264187 GRM8O00222 908 aa16.88■□□□□ 0.29
NID1-201ENST00000264187 CREB3L3Q68CJ9 461 aa16.88■□□□□ 0.29
NID1-201ENST00000264187 BIN2Q9UBW5 565 aaPredicted RBP16.88■□□□□ 0.29
NID1-201ENST00000264187 TUBB4AP04350 444 aa16.88■□□□□ 0.29
NID1-201ENST00000264187 INPP5BP32019 993 aa16.88■□□□□ 0.29
NID1-201ENST00000264187 CASC4Q6P4E1 433 aa16.88■□□□□ 0.29
NID1-201ENST00000264187 GOLGA6CA6NDK9 693 aa16.88■□□□□ 0.29
NID1-201ENST00000264187 GOLGA6DP0CG33 693 aa16.88■□□□□ 0.29
NID1-201ENST00000264187 GNA11P29992 359 aa16.88■□□□□ 0.29
NID1-201ENST00000264187 RAB3GAP1Q15042 981 aa16.88■□□□□ 0.29
NID1-201ENST00000264187 GOLGA6AQ9NYA3 693 aa16.88■□□□□ 0.29
NID1-201ENST00000264187 ASIC3Q9UHC3 531 aa16.88■□□□□ 0.29
NID1-201ENST00000264187 GBP1P32455 592 aa16.88■□□□□ 0.29
NID1-201ENST00000264187 MYL5Q02045 173 aa16.88■□□□□ 0.29
NID1-201ENST00000264187 C17orf53Q8N3J3 647 aaPredicted RBP16.88■□□□□ 0.29
NID1-201ENST00000264187 NAPGQ99747 312 aaPredicted RBP16.88■□□□□ 0.29
NID1-201ENST00000264187 RNF113AO15541 343 aaKnown RBP16.87■□□□□ 0.29
NID1-201ENST00000264187 CUL4BQ13620 913 aa16.87■□□□□ 0.29
NID1-201ENST00000264187 KIFAP3Q92845 792 aa16.87■□□□□ 0.29
NID1-201ENST00000264187 DTNBO60941 627 aa16.87■□□□□ 0.29
NID1-201ENST00000264187 IL15P40933 162 aaPredicted RBP16.87■□□□□ 0.29
NID1-201ENST00000264187 HHATQ5VTY9 493 aa16.87■□□□□ 0.29
NID1-201ENST00000264187 MGARPQ8TDB4 240 aa16.87■□□□□ 0.29
NID1-201ENST00000264187 CARD6Q9BX69 1037 aa16.87■□□□□ 0.29
NID1-201ENST00000264187 FNBP4Q8N3X1 1017 aaPredicted RBP16.87■□□□□ 0.29
NID1-201ENST00000264187 DACT3Q96B18 629 aaPredicted RBP16.87■□□□□ 0.29
NID1-201ENST00000264187 CSRNP2Q9H175 543 aa16.87■□□□□ 0.29
NID1-201ENST00000264187 PLEKHH2Q8IVE3 1493 aa16.87■□□□□ 0.29
NID1-201ENST00000264187 ZNF853P0CG23 659 aa16.86■□□□□ 0.29
NID1-201ENST00000264187 CCDC62Q6P9F0 684 aa16.86■□□□□ 0.29
NID1-201ENST00000264187 B4GALNT4Q76KP1 1039 aa16.86■□□□□ 0.29
NID1-201ENST00000264187 ACTN4O43707 911 aaKnown RBP16.86■□□□□ 0.29
NID1-201ENST00000264187 BSPRYQ5W0U4 402 aa16.86■□□□□ 0.29
NID1-201ENST00000264187 DDX27Q96GQ7 796 aaKnown RBP16.86■□□□□ 0.29
NID1-201ENST00000264187 GDAP1L1Q96MZ0 367 aa16.86■□□□□ 0.29
NID1-201ENST00000264187 TACO1Q9BSH4 297 aaKnown RBP16.86■□□□□ 0.29
NID1-201ENST00000264187 DDX39AO00148 427 aaKnown RBP16.86■□□□□ 0.29
NID1-201ENST00000264187 TBC1D7Q9P0N9 293 aa16.86■□□□□ 0.29
NID1-201ENST00000264187 TFCP2Q12800 502 aa16.86■□□□□ 0.29
NID1-201ENST00000264187 ZC3H12CQ9C0D7 883 aaKnown RBP16.86■□□□□ 0.29
NID1-201ENST00000264187 DDX21Q9NR30 783 aaKnown RBP eCLIP16.86■□□□□ 0.29
NID1-201ENST00000264187 B4DLN1 442 aa16.85■□□□□ 0.29
NID1-201ENST00000264187 MRPL12P52815 198 aaKnown RBP16.85■□□□□ 0.29
NID1-201ENST00000264187 GSDMBQ8TAX9 411 aa16.85■□□□□ 0.29
NID1-201ENST00000264187 CEP104O60308 925 aa16.85■□□□□ 0.29
NID1-201ENST00000264187 TRPC3Q13507 836 aa16.85■□□□□ 0.29
NID1-201ENST00000264187 ASIC2Q16515 512 aa16.85■□□□□ 0.29
NID1-201ENST00000264187 PARP1P09874 1014 aaKnown RBP16.85■□□□□ 0.29
NID1-201ENST00000264187 SLC8A3P57103 927 aa16.85■□□□□ 0.29
NID1-201ENST00000264187 CWF19L2Q2TBE0 894 aaKnown RBP16.85■□□□□ 0.29
NID1-201ENST00000264187 SH2D4BQ5SQS7 431 aa16.85■□□□□ 0.29
NID1-201ENST00000264187 DHX29Q7Z478 1369 aaKnown RBP16.85■□□□□ 0.29
NID1-201ENST00000264187 RAD51AP2Q09MP3 1159 aa16.85■□□□□ 0.29
NID1-201ENST00000264187 STK38LQ9Y2H1 464 aa16.85■□□□□ 0.29
NID1-201ENST00000264187 RABGAP1Q9Y3P9 1069 aa16.85■□□□□ 0.29
NID1-201ENST00000264187 ATAD2BQ9ULI0 1458 aa16.85■□□□□ 0.29
NID1-201ENST00000264187 ATP8B2P98198 1209 aa16.85■□□□□ 0.29
NID1-201ENST00000264187 ZYXQ15942 572 aaKnown RBP16.85■□□□□ 0.29
NID1-201ENST00000264187 PIK3AP1Q6ZUJ8 805 aa16.85■□□□□ 0.29
NID1-201ENST00000264187 ZRANB1Q9UGI0 708 aa16.84■□□□□ 0.29
NID1-201ENST00000264187 KRT15P19012 456 aa16.84■□□□□ 0.29
NID1-201ENST00000264187 CEBPAP49715 358 aaPredicted RBP16.84■□□□□ 0.29
NID1-201ENST00000264187 ELF2Q15723 593 aa16.84■□□□□ 0.29
NID1-201ENST00000264187 CTTNBP2NLQ9P2B4 639 aa16.84■□□□□ 0.29
NID1-201ENST00000264187 SWAP70Q9UH65 585 aa16.84■□□□□ 0.29
NID1-201ENST00000264187 CETN3O15182 167 aa16.84■□□□□ 0.29
NID1-201ENST00000264187 CCNT1O60563 726 aaKnown RBP16.84■□□□□ 0.29
NID1-201ENST00000264187 GIGYF1O75420 1035 aaPredicted RBP16.84■□□□□ 0.29
NID1-201ENST00000264187 TUBB4BP68371 445 aa16.84■□□□□ 0.29
NID1-201ENST00000264187 BIRC2Q13490 618 aa16.84■□□□□ 0.29
NID1-201ENST00000264187 HDAC1Q13547 482 aaPredicted RBP16.84■□□□□ 0.29
NID1-201ENST00000264187 WHAMMQ8TF30 809 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms