RNA–Protein interactions for RNA: ENST00000263857.10

POLR1A-201, Transcript of RNA polymerase I subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1A, Length 12,749 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-201ENST00000263857 MED4Q9NPJ6 270 aa7.48□□□□□ -1.21
POLR1A-201ENST00000263857 ORC3Q9UBD5 711 aaPredicted RBP7.48□□□□□ -1.21
POLR1A-201ENST00000263857 FHOD3Q2V2M9 1422 aa7.48□□□□□ -1.21
POLR1A-201ENST00000263857 PRPF38AQ8NAV1 312 aaKnown RBP7.48□□□□□ -1.21
POLR1A-201ENST00000263857 ESR2Q92731 530 aa7.48□□□□□ -1.21
POLR1A-201ENST00000263857 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.48□□□□□ -1.21
POLR1A-201ENST00000263857 HPDP32754 393 aaPredicted RBP7.48□□□□□ -1.21
POLR1A-201ENST00000263857 UBXN1Q04323 297 aa7.48□□□□□ -1.21
POLR1A-201ENST00000263857 C1orf115Q9H7X2 142 aa7.48□□□□□ -1.21
POLR1A-201ENST00000263857 PPANQ9NQ55 473 aaKnown RBP7.48□□□□□ -1.21
POLR1A-201ENST00000263857 ABCF2Q9UG63 623 aa7.48□□□□□ -1.21
POLR1A-201ENST00000263857 KRT8P05787 483 aa7.48□□□□□ -1.21
POLR1A-201ENST00000263857 PDZD4Q76G19 769 aaPredicted RBP7.48□□□□□ -1.21
POLR1A-201ENST00000263857 TMEM57Q8N5G2 664 aa7.48□□□□□ -1.21
POLR1A-201ENST00000263857 CRNKL1Q9BZJ0 848 aaKnown RBP7.48□□□□□ -1.21
POLR1A-201ENST00000263857 UAP1Q16222 522 aaPredicted RBP7.48□□□□□ -1.21
POLR1A-201ENST00000263857 PODNQ7Z5L7 613 aa7.48□□□□□ -1.21
POLR1A-201ENST00000263857 PDZD8Q8NEN9 1154 aa7.48□□□□□ -1.21
POLR1A-201ENST00000263857 LEO1Q8WVC0 666 aaPredicted RBP7.48□□□□□ -1.21
POLR1A-201ENST00000263857 NAPGQ99747 312 aaPredicted RBP7.48□□□□□ -1.21
POLR1A-201ENST00000263857 CAMSAP2Q08AD1 1489 aa7.48□□□□□ -1.21
POLR1A-201ENST00000263857 SUPT6HQ7KZ85 1726 aaKnown RBP7.47□□□□□ -1.21
POLR1A-201ENST00000263857 SMIM23A6NLE4 172 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 DAPK3O43293 454 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 GJC1P36383 396 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 SNCBQ16143 134 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 KRBA2Q6ZNG9 492 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 TOP2AP11388 1531 aaKnown RBP7.47□□□□□ -1.21
POLR1A-201ENST00000263857 ZNF569Q5MCW4 686 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 MORC4Q8TE76 937 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 RFX1P22670 979 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 CCDC92Q53HC0 331 aaPredicted RBP7.47□□□□□ -1.21
POLR1A-201ENST00000263857 CCDC122Q5T0U0 273 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 ZKSCAN5Q9Y2L8 839 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 RTL1A6NKG5 1358 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 BTBD11A6QL63 1104 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 ASPHQ12797 758 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 KRT79Q5XKE5 535 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 VPS41P49754 854 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 DIXDC1Q155Q3 683 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 ADAMTS8Q9UP79 889 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 AMOTL2Q9Y2J4 779 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 F8W8V4 182 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 BIN1O00499 593 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 KPNA2P52292 529 aaKnown RBP7.47□□□□□ -1.21
POLR1A-201ENST00000263857 RTN1Q16799 776 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 TPX2Q9ULW0 747 aaKnown RBP7.47□□□□□ -1.21
POLR1A-201ENST00000263857 USP16Q9Y5T5 823 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 PTPRCP08575 1304 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 APOEP02649 317 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 ZNF692Q9BU19 519 aaPredicted RBP7.47□□□□□ -1.21
POLR1A-201ENST00000263857 CEP250Q9BV73 2442 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 TAF11Q15544 211 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 NUP58Q9BVL2 599 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 RNF216Q9NWF9 866 aaPredicted RBP7.47□□□□□ -1.21
POLR1A-201ENST00000263857 TLDC2A0PJX2 215 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 ZSCAN23Q3MJ62 389 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 BAG1Q99933 345 aaPredicted RBP7.47□□□□□ -1.21
POLR1A-201ENST00000263857 P4HA1P13674 534 aa7.47□□□□□ -1.21
POLR1A-201ENST00000263857 RSBN1LQ6PCB5 846 aaPredicted RBP7.47□□□□□ -1.21
POLR1A-201ENST00000263857 EXOSC9Q06265 439 aaKnown RBP7.46□□□□□ -1.21
POLR1A-201ENST00000263857 WTAPQ15007 396 aa7.46□□□□□ -1.21
POLR1A-201ENST00000263857 FBXO41Q8TF61 875 aa7.46□□□□□ -1.21
POLR1A-201ENST00000263857 CACTINQ8WUQ7 758 aaKnown RBP7.46□□□□□ -1.21
POLR1A-201ENST00000263857 KAT6AQ92794 2004 aa7.46□□□□□ -1.21
POLR1A-201ENST00000263857 EIF3CLB5ME19 914 aaKnown RBP7.46□□□□□ -1.21
POLR1A-201ENST00000263857 AKR1B15C9JRZ8 316 aaPredicted RBP7.46□□□□□ -1.21
POLR1A-201ENST00000263857 RUNDC3BQ96NL0 473 aa7.46□□□□□ -1.21
POLR1A-201ENST00000263857 EIF3CQ99613 913 aaKnown RBP7.46□□□□□ -1.21
POLR1A-201ENST00000263857 EFCC1Q9HA90 598 aa7.46□□□□□ -1.21
POLR1A-201ENST00000263857 DKC1O60832 514 aaKnown RBP eCLIP7.46□□□□□ -1.21
POLR1A-201ENST00000263857 LONP1P36776 959 aaKnown RBP7.46□□□□□ -1.21
POLR1A-201ENST00000263857 BANK1Q8NDB2 785 aa7.46□□□□□ -1.21
POLR1A-201ENST00000263857 CABS1Q96KC9 395 aa7.46□□□□□ -1.21
POLR1A-201ENST00000263857 SPDYE3A6NKU9 549 aa7.46□□□□□ -1.21
POLR1A-201ENST00000263857 FAM177BA6PVY3 158 aa7.46□□□□□ -1.21
POLR1A-201ENST00000263857 GNAT2P19087 354 aa7.46□□□□□ -1.21
POLR1A-201ENST00000263857 SSFA2P28290 1259 aa7.46□□□□□ -1.21
POLR1A-201ENST00000263857 MCM7P33993 719 aa7.46□□□□□ -1.21
POLR1A-201ENST00000263857 BBOF1Q8ND07 529 aa7.46□□□□□ -1.21
POLR1A-201ENST00000263857 HOMER3Q9NSC5 361 aa7.46□□□□□ -1.21
POLR1A-201ENST00000263857 PPP2R1AP30153 589 aa7.46□□□□□ -1.22
POLR1A-201ENST00000263857 BRAPQ7Z569 592 aa7.46□□□□□ -1.22
POLR1A-201ENST00000263857 RABEP2Q9H5N1 569 aa7.46□□□□□ -1.22
POLR1A-201ENST00000263857 LMNB1P20700 586 aa7.46□□□□□ -1.22
POLR1A-201ENST00000263857 SPDL1Q96EA4 605 aa7.46□□□□□ -1.22
POLR1A-201ENST00000263857 DOPEY2Q9Y3R5 2298 aa7.46□□□□□ -1.22
POLR1A-201ENST00000263857 TMEM110-MUSTN1A8MSY1 372 aa7.46□□□□□ -1.22
POLR1A-201ENST00000263857 CCDC152Q4G0S7 254 aa7.46□□□□□ -1.22
POLR1A-201ENST00000263857 TUBB6Q9BUF5 446 aa7.46□□□□□ -1.22
POLR1A-201ENST00000263857 RBSNQ9H1K0 784 aa7.46□□□□□ -1.22
POLR1A-201ENST00000263857 MRPL46Q9H2W6 279 aaKnown RBP7.46□□□□□ -1.22
POLR1A-201ENST00000263857 APBA1Q02410 837 aa7.46□□□□□ -1.22
POLR1A-201ENST00000263857 KHDRBS2Q5VWX1 349 aaKnown RBP7.46□□□□□ -1.22
POLR1A-201ENST00000263857 PATL1Q86TB9 770 aaKnown RBP7.46□□□□□ -1.22
POLR1A-201ENST00000263857 IQUBQ8NA54 791 aa7.46□□□□□ -1.22
POLR1A-201ENST00000263857 TSPY2A6NKD2 308 aa7.46□□□□□ -1.22
POLR1A-201ENST00000263857 SART1O43290 800 aaKnown RBP7.46□□□□□ -1.22
POLR1A-201ENST00000263857 FAM160A1Q05DH4 1040 aa7.46□□□□□ -1.22
POLR1A-201ENST00000263857 TTC16Q8NEE8 873 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms