RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 DIXDC1Q155Q3 683 aa14.46□□□□□ -0.09
TTC39A-202ENST00000262676 KLHL40Q2TBA0 621 aa14.46□□□□□ -0.09
TTC39A-202ENST00000262676 TBC1D9Q6ZT07 1266 aa14.46□□□□□ -0.09
TTC39A-202ENST00000262676 ATP6V0A2Q9Y487 856 aa14.46□□□□□ -0.09
TTC39A-202ENST00000262676 TACC3Q9Y6A5 838 aa14.46□□□□□ -0.09
TTC39A-202ENST00000262676 TCP10Q12799 353 aa14.46□□□□□ -0.1
TTC39A-202ENST00000262676 SF3A3Q12874 501 aaKnown RBP eCLIP14.46□□□□□ -0.1
TTC39A-202ENST00000262676 TMEM94Q12767 1356 aa14.46□□□□□ -0.1
TTC39A-202ENST00000262676 DUOX2Q9NRD8 1548 aa14.45□□□□□ -0.1
TTC39A-202ENST00000262676 KIAA1524Q8TCG1 905 aa14.45□□□□□ -0.1
TTC39A-202ENST00000262676 EVI5LQ96CN4 794 aa14.45□□□□□ -0.1
TTC39A-202ENST00000262676 PA2G4Q9UQ80 394 aaKnown RBP14.45□□□□□ -0.1
TTC39A-202ENST00000262676 RNMTO43148 476 aaKnown RBP14.45□□□□□ -0.1
TTC39A-202ENST00000262676 ASIC1P78348 528 aa14.45□□□□□ -0.1
TTC39A-202ENST00000262676 KRT24Q2M2I5 525 aa14.45□□□□□ -0.1
TTC39A-202ENST00000262676 HDXQ7Z353 690 aa14.45□□□□□ -0.1
TTC39A-202ENST00000262676 RABGAP1Q9Y3P9 1069 aa14.45□□□□□ -0.1
TTC39A-202ENST00000262676 LDHBP07195 334 aaKnown RBP14.45□□□□□ -0.1
TTC39A-202ENST00000262676 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.45□□□□□ -0.1
TTC39A-202ENST00000262676 NKIRAS1Q9NYS0 192 aa14.45□□□□□ -0.1
TTC39A-202ENST00000262676 FMNL3Q8IVF7 1028 aa14.45□□□□□ -0.1
TTC39A-202ENST00000262676 IFT74Q96LB3 600 aa14.45□□□□□ -0.1
TTC39A-202ENST00000262676 ZBTB21Q9ULJ3 1066 aa14.45□□□□□ -0.1
TTC39A-202ENST00000262676 VAV2P52735 878 aa14.45□□□□□ -0.1
TTC39A-202ENST00000262676 LRRC2Q9BYS8 371 aa14.45□□□□□ -0.1
TTC39A-202ENST00000262676 MAP3K19Q56UN5 1328 aa14.45□□□□□ -0.1
TTC39A-202ENST00000262676 VGLL3A8MV65 326 aa14.44□□□□□ -0.1
TTC39A-202ENST00000262676 UQCRFS1P1P0C7P4 283 aa14.44□□□□□ -0.1
TTC39A-202ENST00000262676 U2AF2P26368 475 aaKnown RBP eCLIP14.44□□□□□ -0.1
TTC39A-202ENST00000262676 AFAP1L1Q8TED9 768 aa14.44□□□□□ -0.1
TTC39A-202ENST00000262676 DHX58Q96C10 678 aa14.44□□□□□ -0.1
TTC39A-202ENST00000262676 NCBP1Q09161 790 aaKnown RBP14.44□□□□□ -0.1
TTC39A-202ENST00000262676 MAK16Q9BXY0 300 aaKnown RBP14.44□□□□□ -0.1
TTC39A-202ENST00000262676 MCM9Q9NXL9 1143 aa14.44□□□□□ -0.1
TTC39A-202ENST00000262676 MCM7P33993 719 aa14.44□□□□□ -0.1
TTC39A-202ENST00000262676 NCOA7Q8NI08 942 aa14.44□□□□□ -0.1
TTC39A-202ENST00000262676 CCDC42Q96M95 316 aa14.44□□□□□ -0.1
TTC39A-202ENST00000262676 OGFRQ9NZT2 677 aa14.44□□□□□ -0.1
TTC39A-202ENST00000262676 GGA1Q9UJY5 639 aa14.44□□□□□ -0.1
TTC39A-202ENST00000262676 H7C1D1 291 aa14.44□□□□□ -0.1
TTC39A-202ENST00000262676 CCDC14Q49A88 953 aa14.44□□□□□ -0.1
TTC39A-202ENST00000262676 HEATR3Q7Z4Q2 680 aa14.44□□□□□ -0.1
TTC39A-202ENST00000262676 ERMNQ8TAM6 284 aa14.44□□□□□ -0.1
TTC39A-202ENST00000262676 DACT3Q96B18 629 aaPredicted RBP14.44□□□□□ -0.1
TTC39A-202ENST00000262676 CLCN1P35523 988 aa14.44□□□□□ -0.1
TTC39A-202ENST00000262676 STX17P56962 302 aa14.44□□□□□ -0.1
TTC39A-202ENST00000262676 FYB2Q5VWT5 728 aa14.44□□□□□ -0.1
TTC39A-202ENST00000262676 C2CD5Q86YS7 1000 aa14.44□□□□□ -0.1
TTC39A-202ENST00000262676 DNAJC10Q8IXB1 793 aa14.44□□□□□ -0.1
TTC39A-202ENST00000262676 LRRC43Q8N309 656 aa14.44□□□□□ -0.1
TTC39A-202ENST00000262676 ZSCAN16Q9H4T2 348 aaPredicted RBP14.44□□□□□ -0.1
TTC39A-202ENST00000262676 PSDA5PKW4 1024 aaPredicted RBP14.43□□□□□ -0.1
TTC39A-202ENST00000262676 SUDS3Q9H7L9 328 aaPredicted RBP14.43□□□□□ -0.1
TTC39A-202ENST00000262676 CCDC122Q5T0U0 273 aa14.43□□□□□ -0.1
TTC39A-202ENST00000262676 SDCCAG8Q86SQ7 713 aaPredicted RBP14.43□□□□□ -0.1
TTC39A-202ENST00000262676 PKD2L1Q9P0L9 805 aa14.43□□□□□ -0.1
TTC39A-202ENST00000262676 ABCC1P33527 1531 aa14.43□□□□□ -0.1
TTC39A-202ENST00000262676 CAVIN2O95810 425 aa14.43□□□□□ -0.1
TTC39A-202ENST00000262676 USP37Q86T82 979 aa14.43□□□□□ -0.1
TTC39A-202ENST00000262676 ARFGAP2Q8N6H7 521 aa14.43□□□□□ -0.1
TTC39A-202ENST00000262676 NEK11Q8NG66 645 aa14.43□□□□□ -0.1
TTC39A-202ENST00000262676 FLT4P35916 1363 aa14.43□□□□□ -0.1
TTC39A-202ENST00000262676 ALG1Q9BT22 464 aa14.43□□□□□ -0.1
TTC39A-202ENST00000262676 POLKQ9UBT6 870 aa14.43□□□□□ -0.1
TTC39A-202ENST00000262676 SBNO2Q9Y2G9 1366 aa14.43□□□□□ -0.1
TTC39A-202ENST00000262676 TMOD4Q9NZQ9 345 aa14.43□□□□□ -0.1
TTC39A-202ENST00000262676 KLF18A0A0U1RQI7 1052 aa14.42□□□□□ -0.1
TTC39A-202ENST00000262676 PSMA7O14818 248 aa14.42□□□□□ -0.1
TTC39A-202ENST00000262676 SLC9C2Q5TAH2 1124 aa14.42□□□□□ -0.1
TTC39A-202ENST00000262676 MAGEB6P1A0A0J9YX57 407 aa14.42□□□□□ -0.1
TTC39A-202ENST00000262676 GRM8O00222 908 aa14.42□□□□□ -0.1
TTC39A-202ENST00000262676 PROCA1Q8NCQ7 364 aaPredicted RBP14.42□□□□□ -0.1
TTC39A-202ENST00000262676 IMPG2Q9BZV3 1241 aa14.42□□□□□ -0.1
TTC39A-202ENST00000262676 CALM1P0DP23 149 aa14.42□□□□□ -0.1
TTC39A-202ENST00000262676 CALM2P0DP24 149 aa14.42□□□□□ -0.1
TTC39A-202ENST00000262676 CALM3P0DP25 149 aa14.42□□□□□ -0.1
TTC39A-202ENST00000262676 CALCOCO2Q13137 446 aa14.42□□□□□ -0.1
TTC39A-202ENST00000262676 PRR16Q569H4 304 aa14.42□□□□□ -0.1
TTC39A-202ENST00000262676 MAGEB6Q8N7X4 407 aa14.42□□□□□ -0.1
TTC39A-202ENST00000262676 TNNC1P63316 161 aa14.42□□□□□ -0.1
TTC39A-202ENST00000262676 B4GALNT4Q76KP1 1039 aa14.42□□□□□ -0.1
TTC39A-202ENST00000262676 GSDMBQ8TAX9 411 aa14.42□□□□□ -0.1
TTC39A-202ENST00000262676 FAM200AQ8TCP9 573 aa14.42□□□□□ -0.1
TTC39A-202ENST00000262676 DACT1Q9NYF0 836 aa14.42□□□□□ -0.1
TTC39A-202ENST00000262676 RNASE9P60153 205 aaKnown RBP14.41□□□□□ -0.1
TTC39A-202ENST00000262676 MAP7Q14244 749 aa14.41□□□□□ -0.1
TTC39A-202ENST00000262676 FNBP4Q8N3X1 1017 aaPredicted RBP14.41□□□□□ -0.1
TTC39A-202ENST00000262676 MRPS27Q92552 414 aaKnown RBP14.41□□□□□ -0.1
TTC39A-202ENST00000262676 HAUS7Q99871 368 aa14.41□□□□□ -0.1
TTC39A-202ENST00000262676 B4DLN1 442 aa14.41□□□□□ -0.1
TTC39A-202ENST00000262676 INPP5BP32019 993 aa14.41□□□□□ -0.1
TTC39A-202ENST00000262676 MRPL12P52815 198 aaKnown RBP14.41□□□□□ -0.1
TTC39A-202ENST00000262676 PPP2R5CQ13362 524 aa14.41□□□□□ -0.1
TTC39A-202ENST00000262676 CLUL1Q15846 466 aa14.41□□□□□ -0.1
TTC39A-202ENST00000262676 SEL1L2Q5TEA6 688 aa14.41□□□□□ -0.1
TTC39A-202ENST00000262676 TMX3Q96JJ7 454 aa14.41□□□□□ -0.1
TTC39A-202ENST00000262676 ANKRD2Q9GZV1 360 aa14.41□□□□□ -0.1
TTC39A-202ENST00000262676 ABT1Q9ULW3 272 aaKnown RBP14.41□□□□□ -0.1
TTC39A-202ENST00000262676 IVNS1ABPQ9Y6Y0 642 aa14.41□□□□□ -0.1
TTC39A-202ENST00000262676 TAF5LO75529 589 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms