RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 CERS5Q8N5B7 392 aa11.62□□□□□ -0.55
TTC39A-201ENST00000262675 MEIS3Q99687 375 aa11.62□□□□□ -0.55
TTC39A-201ENST00000262675 CWC22Q9HCG8 908 aaKnown RBP11.62□□□□□ -0.55
TTC39A-201ENST00000262675 CNNM1Q9NRU3 951 aa11.62□□□□□ -0.55
TTC39A-201ENST00000262675 TESPA1A2RU30 521 aaPredicted RBP11.61□□□□□ -0.55
TTC39A-201ENST00000262675 WDHD1O75717 1129 aaPredicted RBP11.61□□□□□ -0.55
TTC39A-201ENST00000262675 MRE11P49959 708 aa11.61□□□□□ -0.55
TTC39A-201ENST00000262675 NUCB2P80303 420 aa11.61□□□□□ -0.55
TTC39A-201ENST00000262675 HOOK2Q96ED9 719 aa11.61□□□□□ -0.55
TTC39A-201ENST00000262675 SRCIN1Q9C0H9 1055 aa11.61□□□□□ -0.55
TTC39A-201ENST00000262675 C9orf78Q9NZ63 289 aaPredicted RBP11.61□□□□□ -0.55
TTC39A-201ENST00000262675 ST18O60284 1047 aa11.61□□□□□ -0.55
TTC39A-201ENST00000262675 TAF5LO75529 589 aa11.61□□□□□ -0.55
TTC39A-201ENST00000262675 RBM5P52756 815 aaKnown RBP eCLIP11.61□□□□□ -0.55
TTC39A-201ENST00000262675 LMBR1LQ6UX01 489 aa11.61□□□□□ -0.55
TTC39A-201ENST00000262675 TNPO1Q92973 898 aaKnown RBP11.61□□□□□ -0.55
TTC39A-201ENST00000262675 VEZTQ9HBM0 779 aa11.61□□□□□ -0.55
TTC39A-201ENST00000262675 MROH5Q6ZUA9 1318 aa11.6□□□□□ -0.55
TTC39A-201ENST00000262675 SSC5DA1L4H1 1573 aa11.6□□□□□ -0.55
TTC39A-201ENST00000262675 SDSP20132 328 aa11.6□□□□□ -0.55
TTC39A-201ENST00000262675 HDLBPQ00341 1268 aaKnown RBP11.6□□□□□ -0.55
TTC39A-201ENST00000262675 SPDYE2Q495Y8 402 aa11.6□□□□□ -0.55
TTC39A-201ENST00000262675 TDRD7Q8NHU6 1098 aaKnown RBP11.6□□□□□ -0.55
TTC39A-201ENST00000262675 TBC1D22AQ8WUA7 517 aa11.6□□□□□ -0.55
TTC39A-201ENST00000262675 PRMT6Q96LA8 375 aaPredicted RBP11.6□□□□□ -0.55
TTC39A-201ENST00000262675 TRIM17Q9Y577 477 aa11.6□□□□□ -0.55
TTC39A-201ENST00000262675 AOX1Q06278 1338 aa11.6□□□□□ -0.55
TTC39A-201ENST00000262675 HIBADHP31937 336 aaKnown RBP11.6□□□□□ -0.55
TTC39A-201ENST00000262675 RASA3Q14644 834 aa11.6□□□□□ -0.55
TTC39A-201ENST00000262675 OTOP1Q7RTM1 612 aa11.6□□□□□ -0.55
TTC39A-201ENST00000262675 HELBQ8NG08 1087 aaPredicted RBP11.6□□□□□ -0.55
TTC39A-201ENST00000262675 F8W031 263 aaPredicted RBP11.59□□□□□ -0.55
TTC39A-201ENST00000262675 ERC2O15083 957 aa11.59□□□□□ -0.55
TTC39A-201ENST00000262675 USP2O75604 605 aaPredicted RBP11.59□□□□□ -0.55
TTC39A-201ENST00000262675 MCM2P49736 904 aa11.59□□□□□ -0.55
TTC39A-201ENST00000262675 ATP8B2P98198 1209 aa11.59□□□□□ -0.55
TTC39A-201ENST00000262675 MFSD14BQ5SR56 506 aa11.59□□□□□ -0.55
TTC39A-201ENST00000262675 ZCCHC17Q9NP64 241 aaKnown RBP11.59□□□□□ -0.55
TTC39A-201ENST00000262675 CLRN2A0PK11 232 aa11.58□□□□□ -0.56
TTC39A-201ENST00000262675 GTF2A2P52657 109 aa11.58□□□□□ -0.56
TTC39A-201ENST00000262675 NBPF12Q5TAG4 269 aaPredicted RBP11.58□□□□□ -0.56
TTC39A-201ENST00000262675 MRIQ9BWK5 157 aa11.58□□□□□ -0.56
TTC39A-201ENST00000262675 ZNF70Q9UC06 446 aaPredicted RBP11.58□□□□□ -0.56
TTC39A-201ENST00000262675 TTF2Q9UNY4 1162 aaKnown RBP11.58□□□□□ -0.56
TTC39A-201ENST00000262675 PTPN22Q9Y2R2 807 aa11.58□□□□□ -0.56
TTC39A-201ENST00000262675 SUGT1Q9Y2Z0 365 aa11.58□□□□□ -0.56
TTC39A-201ENST00000262675 MAST3O60307 1309 aa11.58□□□□□ -0.56
TTC39A-201ENST00000262675 IGF2BP3O00425 579 aaKnown RBP eCLIP11.58□□□□□ -0.56
TTC39A-201ENST00000262675 PDE1AP54750 535 aa11.58□□□□□ -0.56
TTC39A-201ENST00000262675 SP3Q02447 781 aa11.58□□□□□ -0.56
TTC39A-201ENST00000262675 SLC4A10Q6U841 1118 aa11.58□□□□□ -0.56
TTC39A-201ENST00000262675 ARMC5Q96C12 935 aa11.58□□□□□ -0.56
TTC39A-201ENST00000262675 CLMNQ96JQ2 1002 aa11.58□□□□□ -0.56
TTC39A-201ENST00000262675 LRRCC1Q9C099 1032 aa11.58□□□□□ -0.56
TTC39A-201ENST00000262675 EFCC1Q9HA90 598 aa11.58□□□□□ -0.56
TTC39A-201ENST00000262675 CSADQ9Y600 493 aa11.58□□□□□ -0.56
TTC39A-201ENST00000262675 OTOFQ9HC10 1997 aa11.58□□□□□ -0.56
TTC39A-201ENST00000262675 MCCP23508 829 aa11.57□□□□□ -0.56
TTC39A-201ENST00000262675 CAVIN4Q5BKX8 364 aa11.57□□□□□ -0.56
TTC39A-201ENST00000262675 VPS37DQ86XT2 251 aa11.57□□□□□ -0.56
TTC39A-201ENST00000262675 R3HDMLQ9H3Y0 253 aa11.57□□□□□ -0.56
TTC39A-201ENST00000262675 ZFYVE28Q9HCC9 887 aa11.57□□□□□ -0.56
TTC39A-201ENST00000262675 TMOD2Q9NZR1 351 aa11.57□□□□□ -0.56
TTC39A-201ENST00000262675 UTYO14607 1347 aa11.57□□□□□ -0.56
TTC39A-201ENST00000262675 F6X3S4 739 aa11.57□□□□□ -0.56
TTC39A-201ENST00000262675 RAB11FIP3O75154 756 aa11.57□□□□□ -0.56
TTC39A-201ENST00000262675 ANAPC15P60006 121 aa11.57□□□□□ -0.56
TTC39A-201ENST00000262675 MAP3K9P80192 1104 aa11.57□□□□□ -0.56
TTC39A-201ENST00000262675 CRHR2Q13324 411 aa11.57□□□□□ -0.56
TTC39A-201ENST00000262675 FKBP1CQ5VVH2 108 aa11.57□□□□□ -0.56
TTC39A-201ENST00000262675 NBPF11Q86T75 865 aa11.57□□□□□ -0.56
TTC39A-201ENST00000262675 OPTNQ96CV9 577 aa11.57□□□□□ -0.56
TTC39A-201ENST00000262675 STAP2Q9UGK3 403 aa11.57□□□□□ -0.56
TTC39A-201ENST00000262675 SALL3Q9BXA9 1300 aa11.56□□□□□ -0.56
TTC39A-201ENST00000262675 TNRC18O15417 2968 aaPredicted RBP11.56□□□□□ -0.56
TTC39A-201ENST00000262675 GNRH1P01148 92 aa11.56□□□□□ -0.56
TTC39A-201ENST00000262675 IL17RAQ96F46 866 aa11.56□□□□□ -0.56
TTC39A-201ENST00000262675 FAM84BQ96KN1 310 aaPredicted RBP11.56□□□□□ -0.56
TTC39A-201ENST00000262675 HDAC5Q9UQL6 1122 aa11.56□□□□□ -0.56
TTC39A-201ENST00000262675 SNAP23O00161 211 aa11.55□□□□□ -0.56
TTC39A-201ENST00000262675 XRCC6P12956 609 aaKnown RBP eCLIP11.55□□□□□ -0.56
TTC39A-201ENST00000262675 CRKP46108 304 aa11.55□□□□□ -0.56
TTC39A-201ENST00000262675 TEKT1Q969V4 418 aa11.55□□□□□ -0.56
TTC39A-201ENST00000262675 ZNF594Q96JF6 807 aaPredicted RBP11.55□□□□□ -0.56
TTC39A-201ENST00000262675 TMEM106CQ9BVX2 250 aa11.55□□□□□ -0.56
TTC39A-201ENST00000262675 CD2BP2O95400 341 aaKnown RBP11.55□□□□□ -0.56
TTC39A-201ENST00000262675 PRMT2P55345 433 aa11.55□□□□□ -0.56
TTC39A-201ENST00000262675 KIF22Q14807 665 aa11.55□□□□□ -0.56
TTC39A-201ENST00000262675 EPHA10Q5JZY3 1008 aa11.55□□□□□ -0.56
TTC39A-201ENST00000262675 FBXO33Q7Z6M2 555 aa11.55□□□□□ -0.56
TTC39A-201ENST00000262675 FAM83AQ86UY5 434 aa11.55□□□□□ -0.56
TTC39A-201ENST00000262675 CD99L2Q8TCZ2 262 aa11.55□□□□□ -0.56
TTC39A-201ENST00000262675 TDRD3Q9H7E2 651 aaKnown RBP11.55□□□□□ -0.56
TTC39A-201ENST00000262675 ELP3Q9H9T3 547 aa11.55□□□□□ -0.56
TTC39A-201ENST00000262675 RIPOR2Q9Y4F9 1068 aa11.55□□□□□ -0.56
TTC39A-201ENST00000262675 RPAP1Q9BWH6 1393 aaPredicted RBP11.55□□□□□ -0.56
TTC39A-201ENST00000262675 CETPP11597 493 aa11.54□□□□□ -0.56
TTC39A-201ENST00000262675 MX1P20591 662 aa11.54□□□□□ -0.56
TTC39A-201ENST00000262675 GJA5P36382 358 aa11.54□□□□□ -0.56
TTC39A-201ENST00000262675 GYG1P46976 350 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms