RNA–Protein interactions for RNA: ENST00000260649.10

SLC3A1-201, Transcript of solute carrier family 3 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A1, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-201ENST00000260649 RBM43Q6ZSC3 357 aaKnown RBP13.2□□□□□ -0.3
SLC3A1-201ENST00000260649 PTF1AQ7RTS3 328 aa13.2□□□□□ -0.3
SLC3A1-201ENST00000260649 SDR42E1Q8WUS8 393 aa13.2□□□□□ -0.3
SLC3A1-201ENST00000260649 SPEF2Q9C093 1822 aa13.2□□□□□ -0.3
SLC3A1-201ENST00000260649 BECN2A8MW95 431 aa13.2□□□□□ -0.3
SLC3A1-201ENST00000260649 ZBTB43O43298 467 aa13.2□□□□□ -0.3
SLC3A1-201ENST00000260649 LINC00301Q8NCQ3 95 aa13.2□□□□□ -0.3
SLC3A1-201ENST00000260649 MRPS27Q92552 414 aaKnown RBP13.2□□□□□ -0.3
SLC3A1-201ENST00000260649 SLC26A6Q9BXS9 759 aa13.2□□□□□ -0.3
SLC3A1-201ENST00000260649 PATL2C9JE40 543 aaKnown RBP13.19□□□□□ -0.3
SLC3A1-201ENST00000260649 SPTLC2O15270 562 aa13.19□□□□□ -0.3
SLC3A1-201ENST00000260649 HSP90AA2PQ14568 343 aaPredicted RBP13.19□□□□□ -0.3
SLC3A1-201ENST00000260649 ERFEQ4G0M1 354 aa13.19□□□□□ -0.3
SLC3A1-201ENST00000260649 RAI14Q9P0K7 980 aa13.19□□□□□ -0.3
SLC3A1-201ENST00000260649 GOLGA6L6A8MZA4 724 aa13.19□□□□□ -0.3
SLC3A1-201ENST00000260649 NTSR2O95665 410 aa13.19□□□□□ -0.3
SLC3A1-201ENST00000260649 ZNF75DP51815 510 aa13.19□□□□□ -0.3
SLC3A1-201ENST00000260649 KIF23Q02241 960 aaPredicted RBP13.19□□□□□ -0.3
SLC3A1-201ENST00000260649 KRT40Q6A162 431 aa13.19□□□□□ -0.3
SLC3A1-201ENST00000260649 TICAM2Q86XR7 235 aa13.19□□□□□ -0.3
SLC3A1-201ENST00000260649 DOT1LQ8TEK3 1739 aa13.19□□□□□ -0.3
SLC3A1-201ENST00000260649 NUP133Q8WUM0 1156 aa13.19□□□□□ -0.3
SLC3A1-201ENST00000260649 BCL11BQ9C0K0 894 aaPredicted RBP13.19□□□□□ -0.3
SLC3A1-201ENST00000260649 JAG2Q9Y219 1238 aa13.19□□□□□ -0.3
SLC3A1-201ENST00000260649 ROBO1Q9Y6N7 1651 aa13.19□□□□□ -0.3
SLC3A1-201ENST00000260649 MYH3P11055 1940 aa13.19□□□□□ -0.3
SLC3A1-201ENST00000260649 CCDC69A6NI79 296 aa13.18□□□□□ -0.3
SLC3A1-201ENST00000260649 GSG1L2A8MUP6 293 aa13.18□□□□□ -0.3
SLC3A1-201ENST00000260649 CYP7A1P22680 504 aa13.18□□□□□ -0.3
SLC3A1-201ENST00000260649 ENGASEQ8NFI3 743 aa13.18□□□□□ -0.3
SLC3A1-201ENST00000260649 ZNF512BQ96KM6 892 aaPredicted RBP13.18□□□□□ -0.3
SLC3A1-201ENST00000260649 RTEL1Q9NZ71 1219 aa13.18□□□□□ -0.3
SLC3A1-201ENST00000260649 SLC12A7Q9Y666 1083 aa13.18□□□□□ -0.3
SLC3A1-201ENST00000260649 ABCC12Q96J65 1359 aa13.18□□□□□ -0.3
SLC3A1-201ENST00000260649 ZMYM6O95789 1325 aa13.18□□□□□ -0.3
SLC3A1-201ENST00000260649 MYH7P12883 1935 aa13.18□□□□□ -0.3
SLC3A1-201ENST00000260649 ATP2B1P20020 1258 aa13.18□□□□□ -0.3
SLC3A1-201ENST00000260649 IARSP41252 1262 aaKnown RBP13.18□□□□□ -0.3
SLC3A1-201ENST00000260649 MFSD6Q6ZSS7 791 aa13.18□□□□□ -0.3
SLC3A1-201ENST00000260649 ADGRA1Q86SQ6 560 aa13.18□□□□□ -0.3
SLC3A1-201ENST00000260649 AOPEPQ8N6M6 819 aa13.18□□□□□ -0.3
SLC3A1-201ENST00000260649 IGDCC4Q8TDY8 1250 aa13.18□□□□□ -0.3
SLC3A1-201ENST00000260649 LY9Q9HBG7 655 aa13.18□□□□□ -0.3
SLC3A1-201ENST00000260649 CLIP2Q9UDT6 1046 aa13.18□□□□□ -0.3
SLC3A1-201ENST00000260649 CYP2D7A0A087X1C5 515 aa13.17□□□□□ -0.3
SLC3A1-201ENST00000260649 RANBP6O60518 1105 aaKnown RBP13.17□□□□□ -0.3
SLC3A1-201ENST00000260649 ARID5BQ14865 1188 aa13.17□□□□□ -0.3
SLC3A1-201ENST00000260649 STX1AQ16623 288 aa13.17□□□□□ -0.3
SLC3A1-201ENST00000260649 SLC4A8Q2Y0W8 1093 aa13.17□□□□□ -0.3
SLC3A1-201ENST00000260649 VPS37DQ86XT2 251 aa13.17□□□□□ -0.3
SLC3A1-201ENST00000260649 TDRD7Q8NHU6 1098 aaKnown RBP13.17□□□□□ -0.3
SLC3A1-201ENST00000260649 COL14A1Q05707 1796 aaKnown RBP13.17□□□□□ -0.3
SLC3A1-201ENST00000260649 GUCY1A2P33402 732 aa13.17□□□□□ -0.3
SLC3A1-201ENST00000260649 SPECC1Q5M775 1068 aa13.17□□□□□ -0.3
SLC3A1-201ENST00000260649 ANO1Q5XXA6 986 aa13.17□□□□□ -0.3
SLC3A1-201ENST00000260649 FMR1NBQ8N0W7 255 aaPredicted RBP13.17□□□□□ -0.3
SLC3A1-201ENST00000260649 FBXL16Q8N461 479 aa13.17□□□□□ -0.3
SLC3A1-201ENST00000260649 CHMP4CQ96CF2 233 aa13.17□□□□□ -0.3
SLC3A1-201ENST00000260649 WDHD1O75717 1129 aaPredicted RBP13.17□□□□□ -0.3
SLC3A1-201ENST00000260649 ZRSR1Q15695 479 aaKnown RBP13.17□□□□□ -0.3
SLC3A1-201ENST00000260649 CCDC144BQ3MJ40 725 aa13.17□□□□□ -0.3
SLC3A1-201ENST00000260649 ADALQ6DHV7 355 aa13.17□□□□□ -0.3
SLC3A1-201ENST00000260649 CPLX2Q6PUV4 134 aaKnown RBP13.17□□□□□ -0.3
SLC3A1-201ENST00000260649 CLIC6Q96NY7 704 aa13.17□□□□□ -0.3
SLC3A1-201ENST00000260649 KCNJ14Q9UNX9 436 aa13.17□□□□□ -0.3
SLC3A1-201ENST00000260649 hCG_1642624A0A1W2PR95 340 aa13.16□□□□□ -0.3
SLC3A1-201ENST00000260649 PRDM1O75626 825 aa13.16□□□□□ -0.3
SLC3A1-201ENST00000260649 IQCB1Q15051 598 aa13.16□□□□□ -0.3
SLC3A1-201ENST00000260649 PARP10Q53GL7 1025 aa13.16□□□□□ -0.3
SLC3A1-201ENST00000260649 AKNAD1Q5T1N1 836 aa13.16□□□□□ -0.3
SLC3A1-201ENST00000260649 FILIP1Q7Z7B0 1213 aa13.16□□□□□ -0.3
SLC3A1-201ENST00000260649 COL16A1Q07092 1604 aaPredicted RBP13.16□□□□□ -0.3
SLC3A1-201ENST00000260649 DYNLL1P63167 89 aaKnown RBP13.16□□□□□ -0.3
SLC3A1-201ENST00000260649 TRIM29Q14134 588 aa13.16□□□□□ -0.3
SLC3A1-201ENST00000260649 LINC00116Q8NCU8 138 aa13.16□□□□□ -0.3
SLC3A1-201ENST00000260649 ANKRD36CQ5JPF3 1778 aa13.15□□□□□ -0.3
SLC3A1-201ENST00000260649 MYH14Q7Z406 1995 aaKnown RBP13.15□□□□□ -0.3
SLC3A1-201ENST00000260649 DPCR1Q3MIW9 517 aa13.15□□□□□ -0.3
SLC3A1-201ENST00000260649 ANKRD18AQ8IVF6 992 aa13.15□□□□□ -0.3
SLC3A1-201ENST00000260649 KIAA1524Q8TCG1 905 aa13.15□□□□□ -0.3
SLC3A1-201ENST00000260649 KCNG4Q8TDN1 519 aa13.15□□□□□ -0.3
SLC3A1-201ENST00000260649 FAM217BQ9NTX9 383 aaPredicted RBP13.15□□□□□ -0.3
SLC3A1-201ENST00000260649 SRP68Q9UHB9 627 aaKnown RBP13.15□□□□□ -0.3
SLC3A1-201ENST00000260649 CTAGE5O15320 804 aa13.15□□□□□ -0.3
SLC3A1-201ENST00000260649 KLRK1P26718 216 aa13.15□□□□□ -0.3
SLC3A1-201ENST00000260649 ATL3Q6DD88 541 aa13.15□□□□□ -0.3
SLC3A1-201ENST00000260649 BRAPQ7Z569 592 aa13.15□□□□□ -0.3
SLC3A1-201ENST00000260649 PLA2G4DQ86XP0 818 aa13.15□□□□□ -0.3
SLC3A1-201ENST00000260649 CELF1Q92879 486 aaKnown RBP13.15□□□□□ -0.3
SLC3A1-201ENST00000260649 TMEM87BQ96K49 555 aa13.15□□□□□ -0.3
SLC3A1-201ENST00000260649 C8orf37Q96NL8 207 aa13.15□□□□□ -0.3
SLC3A1-201ENST00000260649 NACAP1Q9BZK3 213 aa13.15□□□□□ -0.3
SLC3A1-201ENST00000260649 MROH7-TTC4A0A0A0MT08 1334 aa13.15□□□□□ -0.3
SLC3A1-201ENST00000260649 COL4A1P02462 1669 aa13.15□□□□□ -0.3
SLC3A1-201ENST00000260649 ZNF202O95125 648 aa13.14□□□□□ -0.31
SLC3A1-201ENST00000260649 PFKFB1P16118 471 aa13.14□□□□□ -0.31
SLC3A1-201ENST00000260649 POLR3EQ9NVU0 708 aa13.14□□□□□ -0.31
SLC3A1-201ENST00000260649 ANO10Q9NW15 660 aa13.14□□□□□ -0.31
SLC3A1-201ENST00000260649 TFCP2L1Q9NZI6 479 aa13.14□□□□□ -0.31
SLC3A1-201ENST00000260649 TAF1P21675 1872 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms