RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 CREB3L3Q68CJ9 461 aa20.88■□□□□ 0.93
SRSF1-201ENST00000258962 KIAA0825Q8IV33 1275 aa20.88■□□□□ 0.93
SRSF1-201ENST00000258962 APPBP2Q92624 585 aa20.88■□□□□ 0.93
SRSF1-201ENST00000258962 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.88■□□□□ 0.93
SRSF1-201ENST00000258962 GNL3LQ9NVN8 582 aaKnown RBP20.88■□□□□ 0.93
SRSF1-201ENST00000258962 JAG2Q9Y219 1238 aa20.88■□□□□ 0.93
SRSF1-201ENST00000258962 PSME4Q14997 1843 aa20.87■□□□□ 0.93
SRSF1-201ENST00000258962 SLC27A2O14975 620 aa20.87■□□□□ 0.93
SRSF1-201ENST00000258962 ST18O60284 1047 aa20.87■□□□□ 0.93
SRSF1-201ENST00000258962 APLP1P51693 650 aa20.87■□□□□ 0.93
SRSF1-201ENST00000258962 NEK4P51957 841 aa20.87■□□□□ 0.93
SRSF1-201ENST00000258962 FKBP1AP62942 108 aaKnown RBP20.87■□□□□ 0.93
SRSF1-201ENST00000258962 MYOZ2Q9NPC6 264 aa20.87■□□□□ 0.93
SRSF1-201ENST00000258962 CHAF1AQ13111 956 aaPredicted RBP20.86■□□□□ 0.93
SRSF1-201ENST00000258962 MFSD14BQ5SR56 506 aa20.86■□□□□ 0.93
SRSF1-201ENST00000258962 IDH1O75874 414 aaKnown RBP20.85■□□□□ 0.93
SRSF1-201ENST00000258962 ITGBL1O95965 494 aaPredicted RBP20.85■□□□□ 0.93
SRSF1-201ENST00000258962 EGFRP00533 1210 aa20.85■□□□□ 0.93
SRSF1-201ENST00000258962 VPS53Q5VIR6 699 aa20.85■□□□□ 0.93
SRSF1-201ENST00000258962 ZSCAN25Q6NSZ9 544 aa20.85■□□□□ 0.93
SRSF1-201ENST00000258962 CERS5Q8N5B7 392 aa20.85■□□□□ 0.93
SRSF1-201ENST00000258962 UPF3BQ9BZI7 483 aaKnown RBP20.85■□□□□ 0.93
SRSF1-201ENST00000258962 PGAP2Q9UHJ9 254 aa20.85■□□□□ 0.93
SRSF1-201ENST00000258962 TCRBV5S4A2TA0A5A2 114 aa20.84■□□□□ 0.93
SRSF1-201ENST00000258962 PDE6AP16499 860 aa20.84■□□□□ 0.93
SRSF1-201ENST00000258962 SLC9C2Q5TAH2 1124 aa20.84■□□□□ 0.93
SRSF1-201ENST00000258962 SPRYD3Q8NCJ5 442 aa20.84■□□□□ 0.93
SRSF1-201ENST00000258962 TBC1D22AQ8WUA7 517 aa20.84■□□□□ 0.93
SRSF1-201ENST00000258962 DCPSQ96C86 337 aaKnown RBP20.84■□□□□ 0.93
SRSF1-201ENST00000258962 DSCC1Q9BVC3 393 aa20.84■□□□□ 0.93
SRSF1-201ENST00000258962 PUS7LQ9H0K6 701 aaKnown RBP20.84■□□□□ 0.93
SRSF1-201ENST00000258962 TAF6LQ9Y6J9 622 aa20.84■□□□□ 0.93
SRSF1-201ENST00000258962 U3KPZ7 1027 aaPredicted RBP20.84■□□□□ 0.93
SRSF1-201ENST00000258962 LAMA4Q16363 1823 aa20.84■□□□□ 0.93
SRSF1-201ENST00000258962 RPAP1Q9BWH6 1393 aaPredicted RBP20.84■□□□□ 0.93
SRSF1-201ENST00000258962 F8W031 263 aaPredicted RBP20.83■□□□□ 0.93
SRSF1-201ENST00000258962 UBE3CQ15386 1083 aa20.83■□□□□ 0.93
SRSF1-201ENST00000258962 ADCK5Q3MIX3 580 aa20.83■□□□□ 0.93
SRSF1-201ENST00000258962 SLKQ9H2G2 1235 aaPredicted RBP20.83■□□□□ 0.93
SRSF1-201ENST00000258962 ZNF532Q9HCE3 1301 aa20.83■□□□□ 0.92
SRSF1-201ENST00000258962 ADAMTSL1Q8N6G6 1762 aa20.83■□□□□ 0.92
SRSF1-201ENST00000258962 FOXP2O15409 715 aa20.83■□□□□ 0.92
SRSF1-201ENST00000258962 HSPD1P10809 573 aaKnown RBP20.83■□□□□ 0.92
SRSF1-201ENST00000258962 CDC37L1Q7L3B6 337 aa20.83■□□□□ 0.92
SRSF1-201ENST00000258962 ANP32EQ9BTT0 268 aa20.83■□□□□ 0.92
SRSF1-201ENST00000258962 MAST2Q6P0Q8 1798 aa20.82■□□□□ 0.92
SRSF1-201ENST00000258962 SEMA3EO15041 775 aa20.82■□□□□ 0.92
SRSF1-201ENST00000258962 TM6SF1Q9BZW5 370 aa20.82■□□□□ 0.92
SRSF1-201ENST00000258962 ZBTB22O15209 634 aa20.81■□□□□ 0.92
SRSF1-201ENST00000258962 ZKSCAN1P17029 563 aaPredicted RBP20.81■□□□□ 0.92
SRSF1-201ENST00000258962 MAP3K12Q12852 859 aa20.81■□□□□ 0.92
SRSF1-201ENST00000258962 DLGAP5Q15398 846 aa20.81■□□□□ 0.92
SRSF1-201ENST00000258962 TSGA10IPQ3SY00 556 aa20.81■□□□□ 0.92
SRSF1-201ENST00000258962 RNF20Q5VTR2 975 aa20.81■□□□□ 0.92
SRSF1-201ENST00000258962 WDR66Q8TBY9 1149 aa20.81■□□□□ 0.92
SRSF1-201ENST00000258962 JAKMIP1Q96N16 626 aaKnown RBP20.81■□□□□ 0.92
SRSF1-201ENST00000258962 TTC14Q96N46 770 aa20.81■□□□□ 0.92
SRSF1-201ENST00000258962 DENND2AQ9ULE3 1009 aa20.81■□□□□ 0.92
SRSF1-201ENST00000258962 PDS5AQ29RF7 1337 aaKnown RBP20.8■□□□□ 0.92
SRSF1-201ENST00000258962 PASKQ96RG2 1323 aa20.8■□□□□ 0.92
SRSF1-201ENST00000258962 GPAA1O43292 621 aa20.8■□□□□ 0.92
SRSF1-201ENST00000258962 KRT26Q7Z3Y9 468 aa20.8■□□□□ 0.92
SRSF1-201ENST00000258962 MAGEB6Q8N7X4 407 aa20.8■□□□□ 0.92
SRSF1-201ENST00000258962 IL27Q8NEV9 243 aa20.8■□□□□ 0.92
SRSF1-201ENST00000258962 GLIS2Q9BZE0 524 aaPredicted RBP20.8■□□□□ 0.92
SRSF1-201ENST00000258962 ZSWIM6Q9HCJ5 1215 aa20.8■□□□□ 0.92
SRSF1-201ENST00000258962 GGA3Q9NZ52 723 aa20.8■□□□□ 0.92
SRSF1-201ENST00000258962 TTF2Q9UNY4 1162 aaKnown RBP20.8■□□□□ 0.92
SRSF1-201ENST00000258962 CPA1P15085 419 aa20.79■□□□□ 0.92
SRSF1-201ENST00000258962 CASTP20810 708 aaKnown RBP20.79■□□□□ 0.92
SRSF1-201ENST00000258962 DDIT3P35638 169 aa20.79■□□□□ 0.92
SRSF1-201ENST00000258962 RBM5P52756 815 aaKnown RBP eCLIP20.79■□□□□ 0.925e-41■■■■□ 19.3
SRSF1-201ENST00000258962 ANGEL2Q5VTE6 544 aaKnown RBP20.79■□□□□ 0.92
SRSF1-201ENST00000258962 USP48Q86UV5 1035 aa20.79■□□□□ 0.92
SRSF1-201ENST00000258962 SULF1Q8IWU6 871 aa20.79■□□□□ 0.92
SRSF1-201ENST00000258962 WNT10BO00744 389 aa20.78■□□□□ 0.92
SRSF1-201ENST00000258962 CYP21A2P08686 494 aa20.78■□□□□ 0.92
SRSF1-201ENST00000258962 MCM2P49736 904 aa20.78■□□□□ 0.92
SRSF1-201ENST00000258962 COL9A3Q14050 684 aaPredicted RBP20.78■□□□□ 0.92
SRSF1-201ENST00000258962 NBPF9Q3BBW0 867 aa20.78■□□□□ 0.92
SRSF1-201ENST00000258962 TMEM88BA6NKF7 163 aa20.78■□□□□ 0.92
SRSF1-201ENST00000258962 TRAF5O00463 557 aa20.78■□□□□ 0.92
SRSF1-201ENST00000258962 LRP2BPQ9P2M1 347 aa20.78■□□□□ 0.92
SRSF1-201ENST00000258962 SUGT1Q9Y2Z0 365 aa20.78■□□□□ 0.92
SRSF1-201ENST00000258962 ASTN2O75129 1339 aaPredicted RBP20.77■□□□□ 0.92
SRSF1-201ENST00000258962 MYO1BO43795 1136 aa20.77■□□□□ 0.92
SRSF1-201ENST00000258962 CFAP100Q494V2 611 aa20.77■□□□□ 0.92
SRSF1-201ENST00000258962 CREBZFQ9NS37 354 aa20.77■□□□□ 0.92
SRSF1-201ENST00000258962 ZNF646O15015 1829 aaPredicted RBP20.76■□□□□ 0.91
SRSF1-201ENST00000258962 HTRA3P83110 453 aa20.76■□□□□ 0.91
SRSF1-201ENST00000258962 RUFY3Q7L099 469 aa20.76■□□□□ 0.91
SRSF1-201ENST00000258962 MTMR14Q8NCE2 650 aa20.76■□□□□ 0.91
SRSF1-201ENST00000258962 TMX3Q96JJ7 454 aa20.76■□□□□ 0.91
SRSF1-201ENST00000258962 ABCF2Q9UG63 623 aa20.76■□□□□ 0.91
SRSF1-201ENST00000258962 SERPINA10Q9UK55 444 aa20.76■□□□□ 0.91
SRSF1-201ENST00000258962 CYP46A1Q9Y6A2 500 aa20.76■□□□□ 0.91
SRSF1-201ENST00000258962 PSMA5P28066 241 aa20.75■□□□□ 0.91
SRSF1-201ENST00000258962 AK2P54819 239 aa20.75■□□□□ 0.91
SRSF1-201ENST00000258962 FMR1Q06787 632 aaKnown RBP eCLIP20.75■□□□□ 0.91
SRSF1-201ENST00000258962 STOX1Q6ZVD7 989 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms