RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 CNBD1Q8NA66 436 aa10.6□□□□□ -0.71
CKAP2-201ENST00000258607 HELLSQ9NRZ9 838 aa10.6□□□□□ -0.71
CKAP2-201ENST00000258607 C5P01031 1676 aa10.6□□□□□ -0.71
CKAP2-201ENST00000258607 BTBD18B2RXH4 712 aa10.6□□□□□ -0.71
CKAP2-201ENST00000258607 FOXP2O15409 715 aa10.6□□□□□ -0.71
CKAP2-201ENST00000258607 TCP10Q12799 353 aa10.6□□□□□ -0.71
CKAP2-201ENST00000258607 LRMPQ12912 555 aa10.6□□□□□ -0.71
CKAP2-201ENST00000258607 TPTE2Q6XPS3 522 aa10.6□□□□□ -0.71
CKAP2-201ENST00000258607 RASGRP4Q8TDF6 673 aa10.6□□□□□ -0.71
CKAP2-201ENST00000258607 MINPP1Q9UNW1 487 aa10.6□□□□□ -0.71
CKAP2-201ENST00000258607 TSPY2A6NKD2 308 aa10.6□□□□□ -0.71
CKAP2-201ENST00000258607 KIF28PB7ZC32 967 aa10.6□□□□□ -0.71
CKAP2-201ENST00000258607 GOLGA6L19H0YKK7 550 aa10.6□□□□□ -0.71
CKAP2-201ENST00000258607 UFL1O94874 794 aa10.6□□□□□ -0.71
CKAP2-201ENST00000258607 LRRFIP1Q32MZ4 808 aaKnown RBP10.6□□□□□ -0.71
CKAP2-201ENST00000258607 NACAP1Q9BZK3 213 aa10.6□□□□□ -0.71
CKAP2-201ENST00000258607 TRMT1Q9NXH9 659 aaKnown RBP10.6□□□□□ -0.71
CKAP2-201ENST00000258607 ARID5BQ14865 1188 aa10.59□□□□□ -0.71
CKAP2-201ENST00000258607 TGFBRAP1Q8WUH2 860 aa10.59□□□□□ -0.71
CKAP2-201ENST00000258607 LRRC4BQ9NT99 713 aa10.59□□□□□ -0.71
CKAP2-201ENST00000258607 NTSR2O95665 410 aa10.59□□□□□ -0.71
CKAP2-201ENST00000258607 ZNF165P49910 485 aa10.59□□□□□ -0.71
CKAP2-201ENST00000258607 TYRO3Q06418 890 aa10.59□□□□□ -0.71
CKAP2-201ENST00000258607 GOLGA8FQ08AF8 430 aa10.59□□□□□ -0.71
CKAP2-201ENST00000258607 GOLGA8DPQ0D2H9 430 aa10.59□□□□□ -0.71
CKAP2-201ENST00000258607 WTAPQ15007 396 aa10.59□□□□□ -0.71
CKAP2-201ENST00000258607 NOM1Q5C9Z4 860 aaKnown RBP10.59□□□□□ -0.71
CKAP2-201ENST00000258607 ZSCAN29Q8IWY8 852 aaPredicted RBP10.59□□□□□ -0.71
CKAP2-201ENST00000258607 ZNF34Q8IZ26 560 aa10.59□□□□□ -0.71
CKAP2-201ENST00000258607 BCL9O00512 1426 aa10.59□□□□□ -0.71
CKAP2-201ENST00000258607 SMC2O95347 1197 aa10.59□□□□□ -0.71
CKAP2-201ENST00000258607 CSF1RP07333 972 aa10.59□□□□□ -0.71
CKAP2-201ENST00000258607 AFMP43652 599 aa10.59□□□□□ -0.71
CKAP2-201ENST00000258607 CPLX2Q6PUV4 134 aaKnown RBP10.59□□□□□ -0.71
CKAP2-201ENST00000258607 STRBPQ96SI9 672 aaKnown RBP10.59□□□□□ -0.71
CKAP2-201ENST00000258607 GNL3LQ9NVN8 582 aaKnown RBP10.59□□□□□ -0.71
CKAP2-201ENST00000258607 MAPK8IP1Q9UQF2 711 aa10.59□□□□□ -0.71
CKAP2-201ENST00000258607 V9GY48 417 aaPredicted RBP10.59□□□□□ -0.71
CKAP2-201ENST00000258607 PXDNLA1KZ92 1463 aa10.58□□□□□ -0.72
CKAP2-201ENST00000258607 ABCC12Q96J65 1359 aa10.58□□□□□ -0.72
CKAP2-201ENST00000258607 SPATA31A5Q5VU36 1347 aa10.58□□□□□ -0.72
CKAP2-201ENST00000258607 SPATA31A7Q8IWB4 1347 aa10.58□□□□□ -0.72
CKAP2-201ENST00000258607 MPHOSPH10O00566 681 aaKnown RBP10.58□□□□□ -0.72
CKAP2-201ENST00000258607 CCDC192P0DO97 292 aa10.58□□□□□ -0.72
CKAP2-201ENST00000258607 FDPSP14324 419 aaKnown RBP10.58□□□□□ -0.72
CKAP2-201ENST00000258607 GOLPH3LQ9H4A5 285 aa10.58□□□□□ -0.72
CKAP2-201ENST00000258607 MKNK2Q9HBH9 465 aa10.58□□□□□ -0.72
CKAP2-201ENST00000258607 ANGEL1Q9UNK9 670 aaKnown RBP10.58□□□□□ -0.72
CKAP2-201ENST00000258607 USP42Q9H9J4 1324 aaKnown RBP10.58□□□□□ -0.72
CKAP2-201ENST00000258607 VEGFAP15692 232 aaPredicted RBP10.58□□□□□ -0.72
CKAP2-201ENST00000258607 LMOD1P29536 600 aaPredicted RBP10.58□□□□□ -0.72
CKAP2-201ENST00000258607 HIBADHP31937 336 aaKnown RBP10.58□□□□□ -0.72
CKAP2-201ENST00000258607 CCDC173Q0VFZ6 552 aa10.58□□□□□ -0.72
CKAP2-201ENST00000258607 GPKOWQ92917 476 aaPredicted RBP eCLIP10.58□□□□□ -0.723e-11■□□□□ 10.3
CKAP2-201ENST00000258607 CABP5Q9NP86 173 aa10.58□□□□□ -0.72
CKAP2-201ENST00000258607 CEP350Q5VT06 3117 aa10.58□□□□□ -0.72
CKAP2-201ENST00000258607 PTGS1P23219 599 aa10.57□□□□□ -0.72
CKAP2-201ENST00000258607 OXER1Q8TDS5 423 aa10.57□□□□□ -0.72
CKAP2-201ENST00000258607 TM6SF1Q9BZW5 370 aa10.57□□□□□ -0.72
CKAP2-201ENST00000258607 TACC3Q9Y6A5 838 aa10.57□□□□□ -0.72
CKAP2-201ENST00000258607 USP17L3A6NCW0 530 aa10.57□□□□□ -0.72
CKAP2-201ENST00000258607 USP17L4A6NCW7 530 aa10.57□□□□□ -0.72
CKAP2-201ENST00000258607 APBA3O96018 575 aa10.57□□□□□ -0.72
CKAP2-201ENST00000258607 GTF2IP78347 998 aa10.57□□□□□ -0.72
CKAP2-201ENST00000258607 ZSCAN25Q6NSZ9 544 aa10.57□□□□□ -0.72
CKAP2-201ENST00000258607 APOA5Q6Q788 366 aa10.57□□□□□ -0.72
CKAP2-201ENST00000258607 USP17L1Q7RTZ2 530 aa10.57□□□□□ -0.72
CKAP2-201ENST00000258607 DSCC1Q9BVC3 393 aa10.57□□□□□ -0.72
CKAP2-201ENST00000258607 NBPF3Q9H094 633 aa10.57□□□□□ -0.72
CKAP2-201ENST00000258607 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.57□□□□□ -0.72
CKAP2-201ENST00000258607 TAF1P21675 1872 aa10.57□□□□□ -0.72
CKAP2-201ENST00000258607 GSG1L2A8MUP6 293 aa10.57□□□□□ -0.72
CKAP2-201ENST00000258607 AP5Z1O43299 807 aa10.57□□□□□ -0.72
CKAP2-201ENST00000258607 PLEKHA8P1O95397 391 aa10.57□□□□□ -0.72
CKAP2-201ENST00000258607 PTMSP20962 102 aa10.57□□□□□ -0.72
CKAP2-201ENST00000258607 NDUFA8P51970 172 aa10.57□□□□□ -0.72
CKAP2-201ENST00000258607 KRT40Q6A162 431 aa10.57□□□□□ -0.72
CKAP2-201ENST00000258607 AOPEPQ8N6M6 819 aa10.57□□□□□ -0.72
CKAP2-201ENST00000258607 FAM84BQ96KN1 310 aaPredicted RBP10.57□□□□□ -0.72
CKAP2-201ENST00000258607 FOXN1O15353 648 aa10.56□□□□□ -0.72
CKAP2-201ENST00000258607 CIAO1O76071 339 aa10.56□□□□□ -0.72
CKAP2-201ENST00000258607 STX17P56962 302 aa10.56□□□□□ -0.72
CKAP2-201ENST00000258607 MECOMQ03112 1051 aa10.56□□□□□ -0.72
CKAP2-201ENST00000258607 GRIN1Q05586 938 aa10.56□□□□□ -0.72
CKAP2-201ENST00000258607 KIAA2012Q0VF49 1180 aa10.56□□□□□ -0.72
CKAP2-201ENST00000258607 C11orf57Q6ZUT1 292 aaPredicted RBP10.56□□□□□ -0.72
CKAP2-201ENST00000258607 DBNDD1Q9H9R9 158 aa10.56□□□□□ -0.72
CKAP2-201ENST00000258607 UQCRFS1P1P0C7P4 283 aa10.56□□□□□ -0.72
CKAP2-201ENST00000258607 SART3Q15020 963 aaKnown RBP10.56□□□□□ -0.72
CKAP2-201ENST00000258607 ZNF174Q15697 407 aa10.56□□□□□ -0.72
CKAP2-201ENST00000258607 RTN1Q16799 776 aa10.56□□□□□ -0.72
CKAP2-201ENST00000258607 C16orf45Q96MC5 204 aaPredicted RBP10.56□□□□□ -0.72
CKAP2-201ENST00000258607 SCAND2PQ9GZW5 306 aaPredicted RBP10.56□□□□□ -0.72
CKAP2-201ENST00000258607 CARMIL3Q8ND23 1372 aa10.56□□□□□ -0.72
CKAP2-201ENST00000258607 TNKSO95271 1327 aa10.56□□□□□ -0.72
CKAP2-201ENST00000258607 TTF1Q15361 905 aaPredicted RBP10.56□□□□□ -0.72
CKAP2-201ENST00000258607 IFIT1BQ5T764 474 aaKnown RBP10.56□□□□□ -0.72
CKAP2-201ENST00000258607 CCDC186Q7Z3E2 898 aa10.56□□□□□ -0.72
CKAP2-201ENST00000258607 TRMT44Q8IYL2 757 aaKnown RBP10.56□□□□□ -0.72
CKAP2-201ENST00000258607 VSIG10Q8N0Z9 540 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms