RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 SELENOSQ9BQE4 189 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 DISC1Q9NRI5 854 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 PDZRN3Q9UPQ7 1066 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 IBTKQ9P2D0 1353 aaPredicted RBP7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 MAP3K9P80192 1104 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 CCDC12Q8WUD4 166 aaPredicted RBP7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 IFT81Q8WYA0 676 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 SDF4Q9BRK5 362 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 THUMPD2Q9BTF0 503 aaKnown RBP7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 NUF2Q9BZD4 464 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 P4HA2O15460 535 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 KRT75O95678 551 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 TUBA3CQ13748 450 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 TAF11Q15544 211 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 ERCC6LQ2NKX8 1250 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 MUM1Q2TAK8 710 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 CFAP157Q5JU67 520 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 GJC2Q5T442 439 aaPredicted RBP7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 PNISRQ8TF01 805 aaKnown RBP7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 UTP14AQ9BVJ6 771 aaKnown RBP7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 PAPOLBQ9NRJ5 636 aaKnown RBP7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 RHBDL2Q9NX52 303 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 FAM169AQ9Y6X4 670 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 ATP10AO60312 1499 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 FCHSD2O94868 740 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 CETN2P41208 172 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 POTEEQ6S8J3 1075 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 FAM200AQ8TCP9 573 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 MIS12Q9H081 205 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 THEGQ9P2T0 379 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 CCT6AP40227 531 aaKnown RBP7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 PIP4K2BP78356 416 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 SF3B2Q13435 895 aaKnown RBP7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 DUSP27Q5VZP5 1158 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 FBXO31Q5XUX0 539 aaPredicted RBP7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 RCSD1Q6JBY9 416 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 FBXO38Q6PIJ6 1188 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 SMC5Q8IY18 1101 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 FAN1Q9Y2M0 1017 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 FLOT1O75955 427 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 UBE4AQ14139 1066 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 IQCB1Q15051 598 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 PPP1R7Q15435 360 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 JAKMIP1Q96N16 626 aaKnown RBP7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 UPF3BQ9BZI7 483 aaKnown RBP7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 ZSWIM4Q9H7M6 989 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 PSD3Q9NYI0 1048 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 CEBPZQ03701 1054 aaKnown RBP7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 PPFIA1Q13136 1202 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 PUS10Q3MIT2 529 aaKnown RBP7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 PROSER2Q86WR7 435 aaPredicted RBP7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 SPOCK3Q9BQ16 436 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 TSGA10Q9BZW7 698 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 SAMD15Q9P1V8 674 aa7.57□□□□□ -1.2
PDGFRA-201ENST00000257290 TTC37Q6PGP7 1564 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 ZNF394Q53GI3 561 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 PACS2Q86VP3 889 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 BBOF1Q8ND07 529 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 PLCB1Q9NQ66 1216 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 MBD5Q9P267 1494 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 DIAPH2O60879 1101 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 PHBP35232 272 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 KLC4Q9NSK0 619 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 ABCC1P33527 1531 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 S100BP04271 92 aaPredicted RBP7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 PDE6BP35913 854 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 SKOR1P84550 965 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 ACTN3Q08043 901 aaPredicted RBP7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 SCRN1Q12765 414 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 CCDC178Q5BJE1 867 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 RBM12BQ8IXT5 1001 aaKnown RBP7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 SIX5Q8N196 739 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 NAA15Q9BXJ9 866 aaKnown RBP7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 AKAP2Q9Y2D5 859 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 THRAP3Q9Y2W1 955 aaKnown RBP7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 DISP3Q9P2K9 1392 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 COQ9O75208 318 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 NLRP6P59044 892 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 GNGT1P63211 74 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 SNX21Q969T3 373 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 CAPS2Q9BXY5 557 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 MAF1Q9H063 256 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 DDX19BQ9UMR2 479 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 KRT7P08729 469 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 EZH1Q92800 747 aaPredicted RBP7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 CTAGE1Q96RT6 745 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 CENPKQ9BS16 269 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 SPZ1Q9BXG8 430 aa7.56□□□□□ -1.2
PDGFRA-201ENST00000257290 AHCYL1O43865 530 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 MLH1P40692 756 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 NFE2L2Q16236 605 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 MCM8Q9UJA3 840 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 PPME1Q9Y570 386 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 hCG_2014768A0A024R1R8 64 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 EFCAB8A8MWE9 144 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 ANKRD65E5RJM6 399 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 ATP6V1G1O75348 118 aa7.55□□□□□ -1.2
PDGFRA-201ENST00000257290 KRT85P78386 507 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms