RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 BCAMP50895 628 aa22.76■■□□□ 1.23
CDC42EP1-201ENST00000249014 PARP10Q53GL7 1025 aa22.76■■□□□ 1.23
CDC42EP1-201ENST00000249014 NIP7Q9Y221 180 aaKnown RBP eCLIP22.76■■□□□ 1.23
CDC42EP1-201ENST00000249014 YEATS4O95619 227 aa22.75■■□□□ 1.23
CDC42EP1-201ENST00000249014 NDUFA8P51970 172 aa22.75■■□□□ 1.23
CDC42EP1-201ENST00000249014 CTDSPL2Q05D32 466 aa22.75■■□□□ 1.23
CDC42EP1-201ENST00000249014 CCDC152Q4G0S7 254 aa22.75■■□□□ 1.23
CDC42EP1-201ENST00000249014 MICU3Q86XE3 530 aa22.75■■□□□ 1.23
CDC42EP1-201ENST00000249014 TMEM87BQ96K49 555 aa22.75■■□□□ 1.23
CDC42EP1-201ENST00000249014 LY9Q9HBG7 655 aa22.75■■□□□ 1.23
CDC42EP1-201ENST00000249014 NRBP1Q9UHY1 535 aa22.75■■□□□ 1.23
CDC42EP1-201ENST00000249014 THRAP3Q9Y2W1 955 aaKnown RBP22.75■■□□□ 1.23
CDC42EP1-201ENST00000249014 CCDC144CPQ8IYA2 1237 aa22.74■■□□□ 1.23
CDC42EP1-201ENST00000249014 KCNG4Q8TDN1 519 aa22.74■■□□□ 1.23
CDC42EP1-201ENST00000249014 PHKBQ93100 1093 aa22.74■■□□□ 1.23
CDC42EP1-201ENST00000249014 NAPBQ9H115 298 aa22.74■■□□□ 1.23
CDC42EP1-201ENST00000249014 GSG1L2A8MUP6 293 aa22.74■■□□□ 1.23
CDC42EP1-201ENST00000249014 SPTLC2O15270 562 aa22.74■■□□□ 1.23
CDC42EP1-201ENST00000249014 SF3A1Q15459 793 aaKnown RBP22.74■■□□□ 1.23
CDC42EP1-201ENST00000249014 CCDC186Q7Z3E2 898 aa22.74■■□□□ 1.23
CDC42EP1-201ENST00000249014 ALG1Q9BT22 464 aa22.74■■□□□ 1.23
CDC42EP1-201ENST00000249014 CICQ96RK0 1608 aaPredicted RBP22.74■■□□□ 1.23
CDC42EP1-201ENST00000249014 BCORQ6W2J9 1755 aa22.73■■□□□ 1.23
CDC42EP1-201ENST00000249014 PRKAB2O43741 272 aa22.73■■□□□ 1.23
CDC42EP1-201ENST00000249014 MYL10Q9BUA6 226 aa22.73■■□□□ 1.23
CDC42EP1-201ENST00000249014 ZSWIM5Q9P217 1185 aa22.73■■□□□ 1.23
CDC42EP1-201ENST00000249014 TIAM2Q8IVF5 1701 aa22.73■■□□□ 1.23
CDC42EP1-201ENST00000249014 IGHMBP2P38935 993 aaKnown RBP22.73■■□□□ 1.23
CDC42EP1-201ENST00000249014 NTRK3Q16288 839 aa22.73■■□□□ 1.23
CDC42EP1-201ENST00000249014 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.73■■□□□ 1.23
CDC42EP1-201ENST00000249014 SGMS1Q86VZ5 419 aa22.73■■□□□ 1.23
CDC42EP1-201ENST00000249014 FAM217BQ9NTX9 383 aaPredicted RBP22.73■■□□□ 1.23
CDC42EP1-201ENST00000249014 RTL9Q8NET4 1388 aa22.73■■□□□ 1.23
CDC42EP1-201ENST00000249014 ZBTB43O43298 467 aa22.72■■□□□ 1.23
CDC42EP1-201ENST00000249014 TMEM67Q5HYA8 995 aa22.72■■□□□ 1.23
CDC42EP1-201ENST00000249014 ANO1Q5XXA6 986 aa22.72■■□□□ 1.23
CDC42EP1-201ENST00000249014 SYNE3Q6ZMZ3 975 aa22.72■■□□□ 1.23
CDC42EP1-201ENST00000249014 DRC7Q8IY82 874 aa22.72■■□□□ 1.23
CDC42EP1-201ENST00000249014 LCORLQ8N3X6 602 aa22.72■■□□□ 1.23
CDC42EP1-201ENST00000249014 BCL9LQ86UU0 1499 aa22.72■■□□□ 1.23
CDC42EP1-201ENST00000249014 CHRNDQ07001 517 aa22.72■■□□□ 1.23
CDC42EP1-201ENST00000249014 DHX40Q8IX18 779 aaKnown RBP22.72■■□□□ 1.23
CDC42EP1-201ENST00000249014 GOLGA6L19H0YKK7 550 aa22.71■■□□□ 1.23
CDC42EP1-201ENST00000249014 RRP9O43818 475 aaKnown RBP22.71■■□□□ 1.23
CDC42EP1-201ENST00000249014 RANBP6O60518 1105 aaKnown RBP22.71■■□□□ 1.23
CDC42EP1-201ENST00000249014 CDKL5O76039 1030 aa22.71■■□□□ 1.23
CDC42EP1-201ENST00000249014 HSP90AA2PQ14568 343 aaPredicted RBP22.71■■□□□ 1.23
CDC42EP1-201ENST00000249014 NFXL1Q6ZNB6 911 aa22.71■■□□□ 1.23
CDC42EP1-201ENST00000249014 RGS22Q8NE09 1264 aa22.71■■□□□ 1.23
CDC42EP1-201ENST00000249014 ANO10Q9NW15 660 aa22.71■■□□□ 1.23
CDC42EP1-201ENST00000249014 LRMPQ12912 555 aa22.7■■□□□ 1.23
CDC42EP1-201ENST00000249014 AXDND1Q5T1B0 1012 aaPredicted RBP22.7■■□□□ 1.23
CDC42EP1-201ENST00000249014 KRT40Q6A162 431 aa22.7■■□□□ 1.23
CDC42EP1-201ENST00000249014 SARM1Q6SZW1 724 aa22.7■■□□□ 1.23
CDC42EP1-201ENST00000249014 SDF4Q9BRK5 362 aa22.7■■□□□ 1.23
CDC42EP1-201ENST00000249014 TAOK2Q9UL54 1235 aa22.7■■□□□ 1.23
CDC42EP1-201ENST00000249014 TAF1P21675 1872 aa22.7■■□□□ 1.22
CDC42EP1-201ENST00000249014 UBE2Q2LH0YL09 131 aa22.7■■□□□ 1.22
CDC42EP1-201ENST00000249014 AKNAD1Q5T1N1 836 aa22.7■■□□□ 1.22
CDC42EP1-201ENST00000249014 VPS37DQ86XT2 251 aa22.7■■□□□ 1.22
CDC42EP1-201ENST00000249014 COL5A3P25940 1745 aaPredicted RBP22.7■■□□□ 1.22
CDC42EP1-201ENST00000249014 SPATA31A5Q5VU36 1347 aa22.69■■□□□ 1.22
CDC42EP1-201ENST00000249014 SPATA31A7Q8IWB4 1347 aa22.69■■□□□ 1.22
CDC42EP1-201ENST00000249014 GOLGA8AA7E2F4 631 aa22.69■■□□□ 1.22
CDC42EP1-201ENST00000249014 KCNQ2O43526 872 aa22.69■■□□□ 1.22
CDC42EP1-201ENST00000249014 LIFRP42702 1097 aa22.69■■□□□ 1.22
CDC42EP1-201ENST00000249014 CLIP2Q9UDT6 1046 aa22.69■■□□□ 1.22
CDC42EP1-201ENST00000249014 CASZ1Q86V15 1759 aa22.69■■□□□ 1.22
CDC42EP1-201ENST00000249014 PNPLA7Q6ZV29 1317 aa22.69■■□□□ 1.22
CDC42EP1-201ENST00000249014 IFIT3O14879 490 aaKnown RBP22.69■■□□□ 1.22
CDC42EP1-201ENST00000249014 WDHD1O75717 1129 aaPredicted RBP22.69■■□□□ 1.22
CDC42EP1-201ENST00000249014 CCDC144BQ3MJ40 725 aa22.69■■□□□ 1.22
CDC42EP1-201ENST00000249014 CPLX2Q6PUV4 134 aaKnown RBP22.69■■□□□ 1.22
CDC42EP1-201ENST00000249014 SLC4A4Q9Y6R1 1079 aa22.69■■□□□ 1.22
CDC42EP1-201ENST00000249014 A0A1B0GUL6 1792 aa22.68■■□□□ 1.22
CDC42EP1-201ENST00000249014 IARSP41252 1262 aaKnown RBP22.68■■□□□ 1.22
CDC42EP1-201ENST00000249014 RBM10P98175 930 aaKnown RBP22.68■■□□□ 1.22
CDC42EP1-201ENST00000249014 MIGA1Q8NAN2 632 aa22.68■■□□□ 1.22
CDC42EP1-201ENST00000249014 FBXW7Q969H0 707 aa22.68■■□□□ 1.22
CDC42EP1-201ENST00000249014 IQSEC3Q9UPP2 1182 aaPredicted RBP22.68■■□□□ 1.22
CDC42EP1-201ENST00000249014 MROH7-TTC4A0A0A0MT08 1334 aa22.68■■□□□ 1.22
CDC42EP1-201ENST00000249014 CDC25BP30305 580 aa22.67■■□□□ 1.22
CDC42EP1-201ENST00000249014 SLC39A14Q15043 492 aa22.67■■□□□ 1.22
CDC42EP1-201ENST00000249014 MFSD6Q6ZSS7 791 aa22.67■■□□□ 1.22
CDC42EP1-201ENST00000249014 CNNM2Q9H8M5 875 aa22.67■■□□□ 1.22
CDC42EP1-201ENST00000249014 SLC12A7Q9Y666 1083 aa22.67■■□□□ 1.22
CDC42EP1-201ENST00000249014 WTIPA6NIX2 430 aaPredicted RBP22.67■■□□□ 1.22
CDC42EP1-201ENST00000249014 BECN2A8MW95 431 aa22.67■■□□□ 1.22
CDC42EP1-201ENST00000249014 DYNC1I1O14576 645 aa22.67■■□□□ 1.22
CDC42EP1-201ENST00000249014 MARCKSP29966 332 aaPredicted RBP22.67■■□□□ 1.22
CDC42EP1-201ENST00000249014 TDO2P48775 406 aa22.67■■□□□ 1.22
CDC42EP1-201ENST00000249014 ADGRA1Q86SQ6 560 aa22.67■■□□□ 1.22
CDC42EP1-201ENST00000249014 KIAA1468Q9P260 1216 aa22.67■■□□□ 1.22
CDC42EP1-201ENST00000249014 LRP2BPQ9P2M1 347 aa22.67■■□□□ 1.22
CDC42EP1-201ENST00000249014 ZNF202O95125 648 aa22.66■■□□□ 1.22
CDC42EP1-201ENST00000249014 GNAT2P19087 354 aa22.66■■□□□ 1.22
CDC42EP1-201ENST00000249014 C3orf67Q6ZVT6 689 aa22.66■■□□□ 1.22
CDC42EP1-201ENST00000249014 CEP57L1Q8IYX8 460 aa22.66■■□□□ 1.22
CDC42EP1-201ENST00000249014 MYRIPQ8NFW9 859 aa22.66■■□□□ 1.22
CDC42EP1-201ENST00000249014 STAG1Q8WVM7 1258 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms