RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 GOLGA6CA6NDK9 693 aa20.85■□□□□ 0.93
PTPN12-201ENST00000248594 FOXN1O15353 648 aa20.85■□□□□ 0.93
PTPN12-201ENST00000248594 GOLGA6DP0CG33 693 aa20.85■□□□□ 0.93
PTPN12-201ENST00000248594 CEBPAP49715 358 aaPredicted RBP20.85■□□□□ 0.93
PTPN12-201ENST00000248594 DDX46Q7L014 1031 aaKnown RBP20.85■□□□□ 0.93
PTPN12-201ENST00000248594 GOLGA6AQ9NYA3 693 aa20.85■□□□□ 0.93
PTPN12-201ENST00000248594 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.85■□□□□ 0.93
PTPN12-201ENST00000248594 SKAP2O75563 359 aaPredicted RBP20.85■□□□□ 0.93
PTPN12-201ENST00000248594 SF3A3Q12874 501 aaKnown RBP eCLIP20.85■□□□□ 0.935e-6■■■■■ 39.5
PTPN12-201ENST00000248594 A0A0G2JLW4 131 aa20.84■□□□□ 0.93
PTPN12-201ENST00000248594 CPLX1O14810 134 aa20.84■□□□□ 0.93
PTPN12-201ENST00000248594 STIM1Q13586 685 aa20.84■□□□□ 0.93
PTPN12-201ENST00000248594 CWF19L2Q2TBE0 894 aaKnown RBP20.84■□□□□ 0.93
PTPN12-201ENST00000248594 EYA1Q99502 592 aa20.84■□□□□ 0.93
PTPN12-201ENST00000248594 PREX1Q8TCU6 1659 aa20.84■□□□□ 0.93
PTPN12-201ENST00000248594 PAX7P23759 505 aa20.84■□□□□ 0.93
PTPN12-201ENST00000248594 MATR3P43243 847 aaKnown RBP eCLIP20.84■□□□□ 0.93
PTPN12-201ENST00000248594 E2F5Q15329 346 aa20.84■□□□□ 0.93
PTPN12-201ENST00000248594 MAP9Q49MG5 647 aa20.84■□□□□ 0.93
PTPN12-201ENST00000248594 GUCA1BQ9UMX6 200 aa20.84■□□□□ 0.93
PTPN12-201ENST00000248594 METP08581 1390 aa20.84■□□□□ 0.93
PTPN12-201ENST00000248594 NDUFAB1O14561 156 aa20.84■□□□□ 0.93
PTPN12-201ENST00000248594 SRGAP2O75044 1071 aa20.84■□□□□ 0.93
PTPN12-201ENST00000248594 GIGYF1O75420 1035 aaPredicted RBP20.84■□□□□ 0.93
PTPN12-201ENST00000248594 CYP21A2P08686 494 aa20.84■□□□□ 0.93
PTPN12-201ENST00000248594 HAND2P61296 217 aa20.84■□□□□ 0.93
PTPN12-201ENST00000248594 CTDNEP1O95476 244 aa20.83■□□□□ 0.93
PTPN12-201ENST00000248594 SATB1Q01826 763 aa20.83■□□□□ 0.93
PTPN12-201ENST00000248594 NAIF1Q69YI7 327 aaPredicted RBP20.83■□□□□ 0.93
PTPN12-201ENST00000248594 TC2NQ8N9U0 490 aa20.83■□□□□ 0.93
PTPN12-201ENST00000248594 LINC00301Q8NCQ3 95 aa20.83■□□□□ 0.93
PTPN12-201ENST00000248594 CCDC148Q8NFR7 591 aa20.83■□□□□ 0.93
PTPN12-201ENST00000248594 CARD10Q9BWT7 1032 aa20.83■□□□□ 0.93
PTPN12-201ENST00000248594 HOOK1Q9UJC3 728 aaKnown RBP20.83■□□□□ 0.93
PTPN12-201ENST00000248594 POTEB2H3BUK9 544 aa20.83■□□□□ 0.92
PTPN12-201ENST00000248594 RPSAP08865 295 aaKnown RBP20.83■□□□□ 0.92
PTPN12-201ENST00000248594 KCNJ6P48051 423 aa20.83■□□□□ 0.92
PTPN12-201ENST00000248594 PDE4BQ07343 736 aa20.83■□□□□ 0.92
PTPN12-201ENST00000248594 ILDR1Q86SU0 546 aaPredicted RBP20.83■□□□□ 0.92
PTPN12-201ENST00000248594 SCLT1Q96NL6 688 aa20.83■□□□□ 0.92
PTPN12-201ENST00000248594 CHPF2Q9P2E5 772 aa20.83■□□□□ 0.92
PTPN12-201ENST00000248594 CCDC196A0A1B0GTZ2 297 aa20.82■□□□□ 0.92
PTPN12-201ENST00000248594 SPECC1LQ69YQ0 1117 aa20.82■□□□□ 0.92
PTPN12-201ENST00000248594 TICAM2Q86XR7 235 aa20.82■□□□□ 0.92
PTPN12-201ENST00000248594 INTS13Q9NVM9 706 aa20.82■□□□□ 0.92
PTPN12-201ENST00000248594 HDAC6Q9UBN7 1215 aa20.82■□□□□ 0.92
PTPN12-201ENST00000248594 SWT1Q5T5J6 900 aaKnown RBP20.82■□□□□ 0.92
PTPN12-201ENST00000248594 SAMSN1Q9NSI8 373 aaKnown RBP20.82■□□□□ 0.92
PTPN12-201ENST00000248594 KCTD16Q68DU8 428 aa20.82■□□□□ 0.92
PTPN12-201ENST00000248594 RAD9BQ6WBX8 426 aa20.82■□□□□ 0.92
PTPN12-201ENST00000248594 TMEM139Q8IV31 216 aa20.82■□□□□ 0.92
PTPN12-201ENST00000248594 TAF5LO75529 589 aa20.81■□□□□ 0.92
PTPN12-201ENST00000248594 GSCP56915 257 aaPredicted RBP20.81■□□□□ 0.92
PTPN12-201ENST00000248594 GRAMD1CQ8IYS0 662 aa20.81■□□□□ 0.92
PTPN12-201ENST00000248594 CTCFLQ8NI51 663 aaPredicted RBP20.81■□□□□ 0.92
PTPN12-201ENST00000248594 NRXN1Q9ULB1 1477 aa20.81■□□□□ 0.92
PTPN12-201ENST00000248594 CPSF1Q10570 1443 aaKnown RBP20.81■□□□□ 0.92
PTPN12-201ENST00000248594 PRAMEF22A3QJZ6 481 aa20.81■□□□□ 0.92
PTPN12-201ENST00000248594 STX10O60499 249 aa20.81■□□□□ 0.92
PTPN12-201ENST00000248594 TFR2Q9UP52 801 aa20.81■□□□□ 0.92
PTPN12-201ENST00000248594 HIP1O00291 1037 aa20.81■□□□□ 0.92
PTPN12-201ENST00000248594 HSD3B7Q9H2F3 369 aa20.81■□□□□ 0.92
PTPN12-201ENST00000248594 PCDHA5Q9Y5H7 936 aa20.81■□□□□ 0.92
PTPN12-201ENST00000248594 TEX33O43247 280 aa20.8■□□□□ 0.92
PTPN12-201ENST00000248594 RXRAP19793 462 aa20.8■□□□□ 0.92
PTPN12-201ENST00000248594 CDC27P30260 824 aa20.8■□□□□ 0.92
PTPN12-201ENST00000248594 PDCLQ13371 301 aa20.8■□□□□ 0.92
PTPN12-201ENST00000248594 POLA2Q14181 598 aa20.8■□□□□ 0.92
PTPN12-201ENST00000248594 KRT32Q14532 448 aa20.8■□□□□ 0.92
PTPN12-201ENST00000248594 NAA16Q6N069 864 aaPredicted RBP20.8■□□□□ 0.92
PTPN12-201ENST00000248594 SLF1Q9BQI6 1058 aa20.8■□□□□ 0.92
PTPN12-201ENST00000248594 MED4Q9NPJ6 270 aa20.8■□□□□ 0.92
PTPN12-201ENST00000248594 PEX19P40855 299 aa20.8■□□□□ 0.92
PTPN12-201ENST00000248594 IRAK1P51617 712 aa20.8■□□□□ 0.92
PTPN12-201ENST00000248594 NAA25Q14CX7 972 aa20.79■□□□□ 0.92
PTPN12-201ENST00000248594 KCNG4Q8TDN1 519 aa20.79■□□□□ 0.92
PTPN12-201ENST00000248594 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.79■□□□□ 0.92
PTPN12-201ENST00000248594 SYF2O95926 243 aaKnown RBP20.79■□□□□ 0.92
PTPN12-201ENST00000248594 MPRIPQ6WCQ1 1025 aa20.79■□□□□ 0.92
PTPN12-201ENST00000248594 CABS1Q96KC9 395 aa20.79■□□□□ 0.92
PTPN12-201ENST00000248594 CAPS2Q9BXY5 557 aa20.79■□□□□ 0.92
PTPN12-201ENST00000248594 LGR6Q9HBX8 967 aa20.79■□□□□ 0.92
PTPN12-201ENST00000248594 ODF2LQ9ULJ1 636 aa20.79■□□□□ 0.92
PTPN12-201ENST00000248594 PIK3C2BO00750 1634 aa20.79■□□□□ 0.92
PTPN12-201ENST00000248594 AKR1B15C9JRZ8 316 aaPredicted RBP20.79■□□□□ 0.92
PTPN12-201ENST00000248594 AIFM3Q96NN9 605 aa20.79■□□□□ 0.92
PTPN12-201ENST00000248594 NAPGQ99747 312 aaPredicted RBP20.79■□□□□ 0.92
PTPN12-201ENST00000248594 GNL3LQ9NVN8 582 aaKnown RBP20.79■□□□□ 0.92
PTPN12-201ENST00000248594 MAP2P11137 1827 aaKnown RBP20.79■□□□□ 0.92
PTPN12-201ENST00000248594 STOX1Q6ZVD7 989 aa20.78■□□□□ 0.92
PTPN12-201ENST00000248594 GPIHBP1Q8IV16 184 aa20.78■□□□□ 0.92
PTPN12-201ENST00000248594 TRIM10Q9UDY6 481 aa20.78■□□□□ 0.92
PTPN12-201ENST00000248594 SETD1BQ9UPS6 1966 aaKnown RBP20.78■□□□□ 0.92
PTPN12-201ENST00000248594 RPS6KA5O75582 802 aa20.78■□□□□ 0.92
PTPN12-201ENST00000248594 PTPRMP28827 1452 aa20.78■□□□□ 0.92
PTPN12-201ENST00000248594 CDK12Q9NYV4 1490 aaPredicted RBP20.78■□□□□ 0.92
PTPN12-201ENST00000248594 CLNS1AP54105 237 aaKnown RBP20.78■□□□□ 0.92
PTPN12-201ENST00000248594 RBL2Q08999 1139 aa20.78■□□□□ 0.92
PTPN12-201ENST00000248594 RUFY1Q96T51 708 aa20.78■□□□□ 0.92
PTPN12-201ENST00000248594 VEZTQ9HBM0 779 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms