RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 DUOX1Q9NRD9 1551 aa22.16■■□□□ 1.14
TNFSF9-201ENST00000245817 CACNA1SQ13698 1873 aa22.16■■□□□ 1.14
TNFSF9-201ENST00000245817 DDIT3P35638 169 aa22.16■■□□□ 1.14
TNFSF9-201ENST00000245817 CCDC93Q567U6 631 aa22.16■■□□□ 1.14
TNFSF9-201ENST00000245817 CERS3Q8IU89 383 aa22.16■■□□□ 1.14
TNFSF9-201ENST00000245817 RTKN2Q8IZC4 609 aa22.16■■□□□ 1.14
TNFSF9-201ENST00000245817 SDR42E1Q8WUS8 393 aa22.16■■□□□ 1.14
TNFSF9-201ENST00000245817 SUGT1Q9Y2Z0 365 aa22.16■■□□□ 1.14
TNFSF9-201ENST00000245817 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.16■■□□□ 1.14
TNFSF9-201ENST00000245817 MCM5P33992 734 aa22.15■■□□□ 1.14
TNFSF9-201ENST00000245817 GIMAP6Q6P9H5 292 aa22.15■■□□□ 1.14
TNFSF9-201ENST00000245817 NLGN2Q8NFZ4 835 aa22.15■■□□□ 1.14
TNFSF9-201ENST00000245817 PIM2Q9P1W9 311 aa22.15■■□□□ 1.14
TNFSF9-201ENST00000245817 SLX4Q8IY92 1834 aa22.14■■□□□ 1.14
TNFSF9-201ENST00000245817 KCNA3P22001 575 aa22.14■■□□□ 1.14
TNFSF9-201ENST00000245817 TOB2Q14106 344 aaPredicted RBP22.14■■□□□ 1.14
TNFSF9-201ENST00000245817 EXOSC10Q01780 885 aaKnown RBP22.14■■□□□ 1.13
TNFSF9-201ENST00000245817 SOGA3Q5TF21 947 aa22.14■■□□□ 1.13
TNFSF9-201ENST00000245817 CNNM2Q9H8M5 875 aa22.14■■□□□ 1.13
TNFSF9-201ENST00000245817 DBNDD1Q9H9R9 158 aa22.14■■□□□ 1.13
TNFSF9-201ENST00000245817 ATP8A2Q9NTI2 1148 aa22.14■■□□□ 1.13
TNFSF9-201ENST00000245817 TPCN1Q9ULQ1 816 aa22.14■■□□□ 1.13
TNFSF9-201ENST00000245817 MROH7-TTC4A0A0A0MT08 1334 aa22.13■■□□□ 1.13
TNFSF9-201ENST00000245817 COL9A3Q14050 684 aaPredicted RBP22.13■■□□□ 1.13
TNFSF9-201ENST00000245817 GOLGB1Q14789 3259 aaKnown RBP22.13■■□□□ 1.13
TNFSF9-201ENST00000245817 DIXDC1Q155Q3 683 aa22.13■■□□□ 1.13
TNFSF9-201ENST00000245817 MFSD6Q6ZSS7 791 aa22.13■■□□□ 1.13
TNFSF9-201ENST00000245817 RNF41Q9H4P4 317 aaPredicted RBP22.13■■□□□ 1.13
TNFSF9-201ENST00000245817 MINDY4BA8MYZ0 360 aa22.12■■□□□ 1.13
TNFSF9-201ENST00000245817 NUCB2P80303 420 aa22.12■■□□□ 1.13
TNFSF9-201ENST00000245817 GRIK5Q16478 980 aa22.12■■□□□ 1.13
TNFSF9-201ENST00000245817 ME3Q16798 604 aa22.12■■□□□ 1.13
TNFSF9-201ENST00000245817 TBC1D10CQ8IV04 446 aa22.12■■□□□ 1.13
TNFSF9-201ENST00000245817 BRF1Q92994 677 aa22.12■■□□□ 1.13
TNFSF9-201ENST00000245817 LRRC2Q9BYS8 371 aa22.12■■□□□ 1.13
TNFSF9-201ENST00000245817 CCDC88AQ3V6T2 1871 aa22.12■■□□□ 1.13
TNFSF9-201ENST00000245817 MAST2Q6P0Q8 1798 aa22.12■■□□□ 1.13
TNFSF9-201ENST00000245817 PLCG2P16885 1265 aa22.11■■□□□ 1.13
TNFSF9-201ENST00000245817 CTDSPL2Q05D32 466 aa22.11■■□□□ 1.13
TNFSF9-201ENST00000245817 PPARAQ07869 468 aa22.11■■□□□ 1.13
TNFSF9-201ENST00000245817 AKNAD1Q5T1N1 836 aa22.11■■□□□ 1.13
TNFSF9-201ENST00000245817 CCDC83Q8IWF9 413 aa22.11■■□□□ 1.13
TNFSF9-201ENST00000245817 KRT23Q9C075 422 aa22.11■■□□□ 1.13
TNFSF9-201ENST00000245817 WDR19Q8NEZ3 1342 aa22.11■■□□□ 1.13
TNFSF9-201ENST00000245817 PRC1O43663 620 aa22.11■■□□□ 1.13
TNFSF9-201ENST00000245817 ECE2O60344 883 aa22.11■■□□□ 1.13
TNFSF9-201ENST00000245817 USP5P45974 858 aa22.11■■□□□ 1.13
TNFSF9-201ENST00000245817 PPP4CP60510 307 aa22.11■■□□□ 1.13
TNFSF9-201ENST00000245817 KIAA2012Q0VF49 1180 aa22.11■■□□□ 1.13
TNFSF9-201ENST00000245817 AOC3Q16853 763 aa22.11■■□□□ 1.13
TNFSF9-201ENST00000245817 CHST3Q7LGC8 479 aa22.11■■□□□ 1.13
TNFSF9-201ENST00000245817 MB21D2Q8IYB1 491 aaPredicted RBP22.11■■□□□ 1.13
TNFSF9-201ENST00000245817 NBPF3Q9H094 633 aa22.11■■□□□ 1.13
TNFSF9-201ENST00000245817 TOMM22Q9NS69 142 aa22.11■■□□□ 1.13
TNFSF9-201ENST00000245817 SMC3Q9UQE7 1217 aa22.11■■□□□ 1.13
TNFSF9-201ENST00000245817 PPIP5K2O43314 1243 aa22.1■■□□□ 1.13
TNFSF9-201ENST00000245817 LARGE1O95461 756 aa22.1■■□□□ 1.13
TNFSF9-201ENST00000245817 STAG1Q8WVM7 1258 aa22.1■■□□□ 1.13
TNFSF9-201ENST00000245817 FAM163AQ96GL9 167 aaPredicted RBP22.1■■□□□ 1.13
TNFSF9-201ENST00000245817 KIAA1551Q9HCM1 1747 aa22.09■■□□□ 1.13
TNFSF9-201ENST00000245817 BTDP43251 543 aa22.09■■□□□ 1.13
TNFSF9-201ENST00000245817 DALRD3Q5D0E6 543 aaKnown RBP22.09■■□□□ 1.13
TNFSF9-201ENST00000245817 AMOTL1Q8IY63 956 aa22.09■■□□□ 1.13
TNFSF9-201ENST00000245817 FBXL16Q8N461 479 aa22.09■■□□□ 1.13
TNFSF9-201ENST00000245817 PSMD1Q99460 953 aa22.09■■□□□ 1.13
TNFSF9-201ENST00000245817 ANAPC4Q9UJX5 808 aa22.09■■□□□ 1.13
TNFSF9-201ENST00000245817 DLEC1Q9Y238 1755 aa22.09■■□□□ 1.13
TNFSF9-201ENST00000245817 SLC3A2P08195 630 aaKnown RBP22.08■■□□□ 1.13
TNFSF9-201ENST00000245817 STRIP1Q5VSL9 837 aa22.08■■□□□ 1.13
TNFSF9-201ENST00000245817 CHMP4CQ96CF2 233 aa22.08■■□□□ 1.13
TNFSF9-201ENST00000245817 AGXT2Q9BYV1 514 aa22.08■■□□□ 1.13
TNFSF9-201ENST00000245817 DCP1AQ9NPI6 582 aaPredicted RBP22.08■■□□□ 1.13
TNFSF9-201ENST00000245817 ARPP21Q9UBL0 812 aaPredicted RBP22.08■■□□□ 1.13
TNFSF9-201ENST00000245817 NAP1L2Q9ULW6 460 aaPredicted RBP22.08■■□□□ 1.13
TNFSF9-201ENST00000245817 GPR75-ASB3A0A0A6YYF3 556 aa22.07■■□□□ 1.12
TNFSF9-201ENST00000245817 B4E1Z4 1266 aa22.07■■□□□ 1.12
TNFSF9-201ENST00000245817 F8W031 263 aaPredicted RBP22.07■■□□□ 1.12
TNFSF9-201ENST00000245817 STK3Q13188 491 aa22.07■■□□□ 1.12
TNFSF9-201ENST00000245817 NBR1Q14596 966 aa22.07■■□□□ 1.12
TNFSF9-201ENST00000245817 CTR9Q6PD62 1173 aa22.07■■□□□ 1.12
TNFSF9-201ENST00000245817 NECAB1Q8N987 351 aa22.07■■□□□ 1.12
TNFSF9-201ENST00000245817 SH3RF3Q8TEJ3 882 aaPredicted RBP22.07■■□□□ 1.12
TNFSF9-201ENST00000245817 TTF2Q9UNY4 1162 aaKnown RBP22.07■■□□□ 1.12
TNFSF9-201ENST00000245817 USP17L3A6NCW0 530 aa22.07■■□□□ 1.12
TNFSF9-201ENST00000245817 USP17L4A6NCW7 530 aa22.07■■□□□ 1.12
TNFSF9-201ENST00000245817 USP17L12C9JPN9 530 aa22.07■■□□□ 1.12
TNFSF9-201ENST00000245817 USP17L21D6R901 530 aa22.07■■□□□ 1.12
TNFSF9-201ENST00000245817 APOBRQ0VD83 1088 aa22.07■■□□□ 1.12
TNFSF9-201ENST00000245817 RAB3GAP1Q15042 981 aa22.07■■□□□ 1.12
TNFSF9-201ENST00000245817 RRP12Q5JTH9 1297 aaKnown RBP22.07■■□□□ 1.12
TNFSF9-201ENST00000245817 USP17L1Q7RTZ2 530 aa22.07■■□□□ 1.12
TNFSF9-201ENST00000245817 NEDD4P46934 1319 aa22.06■■□□□ 1.12
TNFSF9-201ENST00000245817 PCP11498 1178 aaKnown RBP22.06■■□□□ 1.12
TNFSF9-201ENST00000245817 FKBP1AP62942 108 aaKnown RBP22.06■■□□□ 1.12
TNFSF9-201ENST00000245817 NFKBIBQ15653 356 aa22.06■■□□□ 1.12
TNFSF9-201ENST00000245817 STK11IPQ8N1F8 1099 aa22.06■■□□□ 1.12
TNFSF9-201ENST00000245817 TMEM87BQ96K49 555 aa22.06■■□□□ 1.12
TNFSF9-201ENST00000245817 VPS33BQ9H267 617 aa22.06■■□□□ 1.12
TNFSF9-201ENST00000245817 MCM9Q9NXL9 1143 aa22.06■■□□□ 1.12
TNFSF9-201ENST00000245817 BCS1LQ9Y276 419 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms