RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 ZFYP08048 801 aaPredicted RBP20.14■□□□□ 0.81
CDKN1A-201ENST00000244741 CXCL9Q07325 125 aa20.14■□□□□ 0.81
CDKN1A-201ENST00000244741 MCMDC2Q4G0Z9 681 aa20.14■□□□□ 0.81
CDKN1A-201ENST00000244741 SPTY2D1Q68D10 685 aaPredicted RBP20.14■□□□□ 0.81
CDKN1A-201ENST00000244741 RUFY2Q8WXA3 655 aa20.14■□□□□ 0.81
CDKN1A-201ENST00000244741 APPBP2Q92624 585 aa20.14■□□□□ 0.81
CDKN1A-201ENST00000244741 INTS4Q96HW7 963 aaKnown RBP20.14■□□□□ 0.81
CDKN1A-201ENST00000244741 VPS33BQ9H267 617 aa20.14■□□□□ 0.81
CDKN1A-201ENST00000244741 UBE3CQ15386 1083 aa20.14■□□□□ 0.81
CDKN1A-201ENST00000244741 LRRFIP1Q32MZ4 808 aaKnown RBP20.14■□□□□ 0.81
CDKN1A-201ENST00000244741 VPS53Q5VIR6 699 aa20.14■□□□□ 0.81
CDKN1A-201ENST00000244741 TTF2Q9UNY4 1162 aaKnown RBP20.14■□□□□ 0.81
CDKN1A-201ENST00000244741 SNX14Q9Y5W7 946 aa20.14■□□□□ 0.81
CDKN1A-201ENST00000244741 NCLP19338 710 aaKnown RBP20.13■□□□□ 0.81
CDKN1A-201ENST00000244741 LMNB1P20700 586 aa20.13■□□□□ 0.81
CDKN1A-201ENST00000244741 DYNLL1P63167 89 aaKnown RBP20.12■□□□□ 0.81
CDKN1A-201ENST00000244741 PTH1RQ03431 593 aa20.12■□□□□ 0.81
CDKN1A-201ENST00000244741 ARMT1Q9H993 441 aa20.12■□□□□ 0.81
CDKN1A-201ENST00000244741 RFX7Q2KHR2 1363 aa20.12■□□□□ 0.81
CDKN1A-201ENST00000244741 MBD4O95243 580 aa20.12■□□□□ 0.81
CDKN1A-201ENST00000244741 BRD1O95696 1058 aa20.12■□□□□ 0.81
CDKN1A-201ENST00000244741 RASEFQ8IZ41 740 aa20.12■□□□□ 0.81
CDKN1A-201ENST00000244741 HELLSQ9NRZ9 838 aa20.12■□□□□ 0.81
CDKN1A-201ENST00000244741 AATFQ9NY61 560 aaKnown RBP eCLIP20.12■□□□□ 0.81
CDKN1A-201ENST00000244741 RNF181Q9P0P0 153 aa20.12■□□□□ 0.81
CDKN1A-201ENST00000244741 PCDHAC2Q9Y5I4 1007 aa20.12■□□□□ 0.81
CDKN1A-201ENST00000244741 GPAA1O43292 621 aa20.11■□□□□ 0.81
CDKN1A-201ENST00000244741 CAVIN1Q6NZI2 390 aaKnown RBP20.11■□□□□ 0.81
CDKN1A-201ENST00000244741 AIDAQ96BJ3 306 aa20.11■□□□□ 0.81
CDKN1A-201ENST00000244741 GJA3Q9Y6H8 435 aa20.11■□□□□ 0.81
CDKN1A-201ENST00000244741 ZBTB22O15209 634 aa20.11■□□□□ 0.81
CDKN1A-201ENST00000244741 KIAA1211Q6ZU35 1233 aa20.11■□□□□ 0.81
CDKN1A-201ENST00000244741 LCORLQ8N3X6 602 aa20.11■□□□□ 0.81
CDKN1A-201ENST00000244741 GPT2Q8TD30 523 aa20.11■□□□□ 0.81
CDKN1A-201ENST00000244741 ZNF541Q9H0D2 1346 aa20.1■□□□□ 0.81
CDKN1A-201ENST00000244741 CIAPIN1Q6FI81 312 aa20.1■□□□□ 0.81
CDKN1A-201ENST00000244741 RSBN1LQ6PCB5 846 aaPredicted RBP20.1■□□□□ 0.81
CDKN1A-201ENST00000244741 CCDC171Q6TFL3 1326 aa20.1■□□□□ 0.81
CDKN1A-201ENST00000244741 VIL1P09327 827 aaKnown RBP20.1■□□□□ 0.81
CDKN1A-201ENST00000244741 C9orf131Q5VYM1 1079 aa20.1■□□□□ 0.81
CDKN1A-201ENST00000244741 SBF1O95248 1867 aa20.09■□□□□ 0.81
CDKN1A-201ENST00000244741 SHTN1A0MZ66 631 aa20.09■□□□□ 0.81
CDKN1A-201ENST00000244741 PRKAB2O43741 272 aa20.09■□□□□ 0.81
CDKN1A-201ENST00000244741 MAGEB6P1A0A0J9YX57 407 aa20.08■□□□□ 0.81
CDKN1A-201ENST00000244741 FZD9O00144 591 aa20.08■□□□□ 0.81
CDKN1A-201ENST00000244741 ZNF445P59923 1031 aa20.08■□□□□ 0.81
CDKN1A-201ENST00000244741 ZSCAN23Q3MJ62 389 aa20.08■□□□□ 0.81
CDKN1A-201ENST00000244741 TTC14Q96N46 770 aa20.08■□□□□ 0.81
CDKN1A-201ENST00000244741 MYH2Q9UKX2 1941 aa20.08■□□□□ 0.81
CDKN1A-201ENST00000244741 ZNF646O15015 1829 aaPredicted RBP20.08■□□□□ 0.8
CDKN1A-201ENST00000244741 RBM5P52756 815 aaKnown RBP eCLIP20.08■□□□□ 0.8
CDKN1A-201ENST00000244741 EIF6P56537 245 aaKnown RBP20.08■□□□□ 0.8
CDKN1A-201ENST00000244741 STRBPQ96SI9 672 aaKnown RBP20.07■□□□□ 0.8
CDKN1A-201ENST00000244741 ADAMTSL1Q8N6G6 1762 aa20.07■□□□□ 0.8
CDKN1A-201ENST00000244741 APPP05067 770 aa20.07■□□□□ 0.8
CDKN1A-201ENST00000244741 HSPD1P10809 573 aaKnown RBP20.07■□□□□ 0.8
CDKN1A-201ENST00000244741 SDR42E1Q8WUS8 393 aa20.07■□□□□ 0.8
CDKN1A-201ENST00000244741 RIOK1Q9BRS2 568 aaKnown RBP20.07■□□□□ 0.8
CDKN1A-201ENST00000244741 DAGLAQ9Y4D2 1042 aa20.07■□□□□ 0.8
CDKN1A-201ENST00000244741 MROH7-TTC4A0A0A0MT08 1334 aa20.06■□□□□ 0.8
CDKN1A-201ENST00000244741 FOXP2O15409 715 aa20.06■□□□□ 0.8
CDKN1A-201ENST00000244741 BTDP43251 543 aa20.06■□□□□ 0.8
CDKN1A-201ENST00000244741 GSTO1P78417 241 aa20.06■□□□□ 0.8
CDKN1A-201ENST00000244741 RBM27Q9P2N5 1060 aaKnown RBP20.06■□□□□ 0.8
CDKN1A-201ENST00000244741 CRKP46108 304 aa20.05■□□□□ 0.8
CDKN1A-201ENST00000244741 AK2P54819 239 aa20.05■□□□□ 0.8
CDKN1A-201ENST00000244741 SH3RF3Q8TEJ3 882 aaPredicted RBP20.05■□□□□ 0.8
CDKN1A-201ENST00000244741 SLC4A4Q9Y6R1 1079 aa20.05■□□□□ 0.8
CDKN1A-201ENST00000244741 GRIN3BO60391 1043 aa20.05■□□□□ 0.8
CDKN1A-201ENST00000244741 TNIP1Q15025 636 aa20.05■□□□□ 0.8
CDKN1A-201ENST00000244741 TICAM2Q86XR7 235 aa20.05■□□□□ 0.8
CDKN1A-201ENST00000244741 GMLQ99445 158 aa20.05■□□□□ 0.8
CDKN1A-201ENST00000244741 LARP6Q9BRS8 491 aaKnown RBP20.05■□□□□ 0.8
CDKN1A-201ENST00000244741 SUGT1Q9Y2Z0 365 aa20.05■□□□□ 0.8
CDKN1A-201ENST00000244741 CPA1P15085 419 aa20.04■□□□□ 0.8
CDKN1A-201ENST00000244741 GMPSP49915 693 aaPredicted RBP20.04■□□□□ 0.8
CDKN1A-201ENST00000244741 FKBP1AP62942 108 aaKnown RBP20.04■□□□□ 0.8
CDKN1A-201ENST00000244741 RUFY3Q7L099 469 aa20.04■□□□□ 0.8
CDKN1A-201ENST00000244741 TEKT1Q969V4 418 aa20.04■□□□□ 0.8
CDKN1A-201ENST00000244741 PSME4Q14997 1843 aa20.04■□□□□ 0.8
CDKN1A-201ENST00000244741 LDHCP07864 332 aa20.04■□□□□ 0.8
CDKN1A-201ENST00000244741 SLC4A8Q2Y0W8 1093 aa20.04■□□□□ 0.8
CDKN1A-201ENST00000244741 RBM8AQ9Y5S9 174 aaKnown RBP20.04■□□□□ 0.8
CDKN1A-201ENST00000244741 NASPP49321 788 aaPredicted RBP20.03■□□□□ 0.8
CDKN1A-201ENST00000244741 MAST2Q6P0Q8 1798 aa20.03■□□□□ 0.8
CDKN1A-201ENST00000244741 DDNO94850 711 aaPredicted RBP20.02■□□□□ 0.8
CDKN1A-201ENST00000244741 USP17L8P0C7I0 530 aa20.02■□□□□ 0.8
CDKN1A-201ENST00000244741 CASTP20810 708 aaKnown RBP20.02■□□□□ 0.8
CDKN1A-201ENST00000244741 RBM26Q5T8P6 1007 aaKnown RBP20.02■□□□□ 0.8
CDKN1A-201ENST00000244741 MAP4K1Q92918 833 aa20.02■□□□□ 0.8
CDKN1A-201ENST00000244741 NOL10Q9BSC4 688 aaKnown RBP20.02■□□□□ 0.8
CDKN1A-201ENST00000244741 LIMCH1Q9UPQ0 1083 aa20.02■□□□□ 0.8
CDKN1A-201ENST00000244741 GAKO14976 1311 aa20.02■□□□□ 0.8
CDKN1A-201ENST00000244741 DICER1Q9UPY3 1922 aaKnown RBP20.02■□□□□ 0.8
CDKN1A-201ENST00000244741 GPR75-ASB3A0A0A6YYF3 556 aa20.02■□□□□ 0.8
CDKN1A-201ENST00000244741 CACNB3P54284 484 aa20.02■□□□□ 0.8
CDKN1A-201ENST00000244741 CFAP100Q494V2 611 aa20.02■□□□□ 0.8
CDKN1A-201ENST00000244741 SLF2Q8IX21 1173 aa20.02■□□□□ 0.8
CDKN1A-201ENST00000244741 OGFOD1Q8N543 542 aa20.02■□□□□ 0.8
CDKN1A-201ENST00000244741 TMEM63CQ9P1W3 806 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms