RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 ALDH8A1Q9H2A2 487 aaPredicted RBP14.79□□□□□ -0.04
MSH2-201ENST00000233146 PREX2Q70Z35 1606 aa14.79□□□□□ -0.04
MSH2-201ENST00000233146 SETD1BQ9UPS6 1966 aaKnown RBP14.79□□□□□ -0.04
MSH2-201ENST00000233146 ANKRD1Q15327 319 aa14.79□□□□□ -0.04
MSH2-201ENST00000233146 C3orf20Q8ND61 904 aa14.79□□□□□ -0.04
MSH2-201ENST00000233146 ANKRD26Q9UPS8 1709 aa14.79□□□□□ -0.04
MSH2-201ENST00000233146 PNMA6EA0A0J9YXQ4 647 aa14.79□□□□□ -0.04
MSH2-201ENST00000233146 SLC8A1P32418 973 aa14.79□□□□□ -0.04
MSH2-201ENST00000233146 SKOR1P84550 965 aa14.79□□□□□ -0.04
MSH2-201ENST00000233146 CNTROBQ8N137 903 aa14.79□□□□□ -0.04
MSH2-201ENST00000233146 FANCLQ9NW38 375 aa14.79□□□□□ -0.04
MSH2-201ENST00000233146 MYO6Q9UM54 1294 aa14.79□□□□□ -0.04
MSH2-201ENST00000233146 KIF5CO60282 957 aa14.78□□□□□ -0.04
MSH2-201ENST00000233146 CCDC175P0C221 793 aa14.78□□□□□ -0.04
MSH2-201ENST00000233146 FAM163BP0C2L3 166 aa14.78□□□□□ -0.04
MSH2-201ENST00000233146 ATP8B2P98198 1209 aa14.78□□□□□ -0.04
MSH2-201ENST00000233146 COL9A3Q14050 684 aaPredicted RBP14.78□□□□□ -0.04
MSH2-201ENST00000233146 CYB5D1Q6P9G0 228 aa14.78□□□□□ -0.04
MSH2-201ENST00000233146 HOOK2Q96ED9 719 aa14.78□□□□□ -0.04
MSH2-201ENST00000233146 CRACR2AQ9BSW2 395 aa14.78□□□□□ -0.04
MSH2-201ENST00000233146 CTAGE9A4FU28 777 aa14.78□□□□□ -0.04
MSH2-201ENST00000233146 MCM3P25205 808 aa14.78□□□□□ -0.04
MSH2-201ENST00000233146 DRP2Q13474 957 aa14.78□□□□□ -0.04
MSH2-201ENST00000233146 MTX1Q13505 466 aa14.78□□□□□ -0.04
MSH2-201ENST00000233146 HSP90AB2PQ58FF8 381 aa14.78□□□□□ -0.04
MSH2-201ENST00000233146 RSRC1Q96IZ7 334 aaKnown RBP14.78□□□□□ -0.04
MSH2-201ENST00000233146 TPX2Q9ULW0 747 aaKnown RBP14.78□□□□□ -0.04
MSH2-201ENST00000233146 ENO4A6NNW6 628 aa14.77□□□□□ -0.04
MSH2-201ENST00000233146 RPSAP08865 295 aaKnown RBP14.77□□□□□ -0.04
MSH2-201ENST00000233146 ZKSCAN1P17029 563 aaPredicted RBP14.77□□□□□ -0.04
MSH2-201ENST00000233146 NAP1L1P55209 391 aaKnown RBP14.77□□□□□ -0.04
MSH2-201ENST00000233146 PTPN21Q16825 1174 aa14.77□□□□□ -0.04
MSH2-201ENST00000233146 FILIP1LQ4L180 1135 aa14.77□□□□□ -0.04
MSH2-201ENST00000233146 ARHGEF25Q86VW2 580 aa14.77□□□□□ -0.04
MSH2-201ENST00000233146 RPUSD2Q8IZ73 545 aaKnown RBP14.77□□□□□ -0.04
MSH2-201ENST00000233146 MRPS27Q92552 414 aaKnown RBP14.77□□□□□ -0.04
MSH2-201ENST00000233146 INTS13Q9NVM9 706 aa14.77□□□□□ -0.04
MSH2-201ENST00000233146 IFT172Q9UG01 1749 aa14.77□□□□□ -0.04
MSH2-201ENST00000233146 CRYBG1Q9Y4K1 1723 aa14.77□□□□□ -0.04
MSH2-201ENST00000233146 H3BQV1 296 aa14.77□□□□□ -0.04
MSH2-201ENST00000233146 PPP1R12BO60237 982 aaPredicted RBP14.77□□□□□ -0.04
MSH2-201ENST00000233146 ZEB2O60315 1214 aa14.77□□□□□ -0.04
MSH2-201ENST00000233146 JAK2O60674 1132 aa14.77□□□□□ -0.04
MSH2-201ENST00000233146 USP14P54578 494 aa14.77□□□□□ -0.04
MSH2-201ENST00000233146 E2F5Q15329 346 aa14.77□□□□□ -0.04
MSH2-201ENST00000233146 IFFO2Q5TF58 517 aa14.77□□□□□ -0.04
MSH2-201ENST00000233146 FUKQ8N0W3 1084 aa14.77□□□□□ -0.04
MSH2-201ENST00000233146 USP28Q96RU2 1077 aa14.77□□□□□ -0.04
MSH2-201ENST00000233146 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.77□□□□□ -0.04
MSH2-201ENST00000233146 LZTFL1Q9NQ48 299 aa14.77□□□□□ -0.04
MSH2-201ENST00000233146 BIN1O00499 593 aa14.77□□□□□ -0.05
MSH2-201ENST00000233146 TOB2Q14106 344 aaPredicted RBP14.77□□□□□ -0.05
MSH2-201ENST00000233146 ATL3Q6DD88 541 aa14.77□□□□□ -0.05
MSH2-201ENST00000233146 BRAPQ7Z569 592 aa14.77□□□□□ -0.05
MSH2-201ENST00000233146 CCDC148Q8NFR7 591 aa14.77□□□□□ -0.05
MSH2-201ENST00000233146 TMX4Q9H1E5 349 aaPredicted RBP14.77□□□□□ -0.05
MSH2-201ENST00000233146 GGA2Q9UJY4 613 aa14.77□□□□□ -0.05
MSH2-201ENST00000233146 RIMS2Q9UQ26 1411 aa14.77□□□□□ -0.05
MSH2-201ENST00000233146 CCT4P50991 539 aaKnown RBP14.76□□□□□ -0.05
MSH2-201ENST00000233146 DCTN1Q14203 1278 aa14.76□□□□□ -0.05
MSH2-201ENST00000233146 ZNF569Q5MCW4 686 aa14.76□□□□□ -0.05
MSH2-201ENST00000233146 DLG5Q8TDM6 1919 aa14.76□□□□□ -0.05
MSH2-201ENST00000233146 ABCC6O95255 1503 aa14.76□□□□□ -0.05
MSH2-201ENST00000233146 ATP10BO94823 1461 aa14.76□□□□□ -0.05
MSH2-201ENST00000233146 PSMA5P28066 241 aa14.76□□□□□ -0.05
MSH2-201ENST00000233146 ME1P48163 572 aa14.76□□□□□ -0.05
MSH2-201ENST00000233146 ARMC3Q5W041 872 aa14.76□□□□□ -0.05
MSH2-201ENST00000233146 SLC39A2Q9NP94 309 aa14.76□□□□□ -0.05
MSH2-201ENST00000233146 MYO1BO43795 1136 aa14.76□□□□□ -0.05
MSH2-201ENST00000233146 RTN3O95197 1032 aaPredicted RBP14.76□□□□□ -0.05
MSH2-201ENST00000233146 ADKP55263 362 aaKnown RBP14.76□□□□□ -0.05
MSH2-201ENST00000233146 MTF1Q14872 753 aa14.76□□□□□ -0.05
MSH2-201ENST00000233146 CREB3L3Q68CJ9 461 aa14.76□□□□□ -0.05
MSH2-201ENST00000233146 IL1RAPL2Q9NP60 686 aa14.76□□□□□ -0.05
MSH2-201ENST00000233146 ADGRG1Q9Y653 693 aa14.76□□□□□ -0.05
MSH2-201ENST00000233146 GOLGA8KD6RF30 607 aa14.75□□□□□ -0.05
MSH2-201ENST00000233146 FYB1O15117 783 aa14.75□□□□□ -0.05
MSH2-201ENST00000233146 PPFIA2O75334 1257 aa14.75□□□□□ -0.05
MSH2-201ENST00000233146 PDILTQ8N807 584 aa14.75□□□□□ -0.05
MSH2-201ENST00000233146 RUFY2Q8WXA3 655 aa14.75□□□□□ -0.05
MSH2-201ENST00000233146 STK31Q9BXU1 1019 aa14.75□□□□□ -0.05
MSH2-201ENST00000233146 TAOK2Q9UL54 1235 aa14.75□□□□□ -0.05
MSH2-201ENST00000233146 A0A1B0GVL5 298 aa14.75□□□□□ -0.05
MSH2-201ENST00000233146 GOLGA6BA6NDN3 693 aa14.75□□□□□ -0.05
MSH2-201ENST00000233146 SLC3A2P08195 630 aaKnown RBP14.75□□□□□ -0.05
MSH2-201ENST00000233146 ATP5JP18859 108 aa14.75□□□□□ -0.05
MSH2-201ENST00000233146 NDUFA8P51970 172 aa14.75□□□□□ -0.05
MSH2-201ENST00000233146 RNF187Q5TA31 235 aaPredicted RBP14.75□□□□□ -0.05
MSH2-201ENST00000233146 CAPRIN2Q6IMN6 1127 aaKnown RBP14.75□□□□□ -0.05
MSH2-201ENST00000233146 SCLT1Q96NL6 688 aa14.75□□□□□ -0.05
MSH2-201ENST00000233146 A0A1W2PP64 1363 aa14.75□□□□□ -0.05
MSH2-201ENST00000233146 A0A0U1RQJ8 604 aa14.74□□□□□ -0.05
MSH2-201ENST00000233146 A0A1W2PQ27 194 aa14.74□□□□□ -0.05
MSH2-201ENST00000233146 A0A1W2PQ64 194 aa14.74□□□□□ -0.05
MSH2-201ENST00000233146 A0A1W2PQD8 194 aa14.74□□□□□ -0.05
MSH2-201ENST00000233146 MYL5Q02045 173 aa14.74□□□□□ -0.05
MSH2-201ENST00000233146 STK3Q13188 491 aa14.74□□□□□ -0.05
MSH2-201ENST00000233146 THEMIS2Q5TEJ8 643 aa14.74□□□□□ -0.05
MSH2-201ENST00000233146 MYSM1Q5VVJ2 828 aa14.74□□□□□ -0.05
MSH2-201ENST00000233146 NAA35Q5VZE5 725 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms