RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 MPHOSPH8Q99549 860 aa12.69□□□□□ -0.38
CDCA3-201ENST00000229265 ADARB2Q9NS39 739 aaKnown RBP12.69□□□□□ -0.38
CDCA3-201ENST00000229265 PDRG1Q9NUG6 133 aa12.69□□□□□ -0.38
CDCA3-201ENST00000229265 BSDC1Q9NW68 430 aaPredicted RBP12.69□□□□□ -0.38
CDCA3-201ENST00000229265 GGA1Q9UJY5 639 aa12.69□□□□□ -0.38
CDCA3-201ENST00000229265 JAG2Q9Y219 1238 aa12.69□□□□□ -0.38
CDCA3-201ENST00000229265 ZNF609O15014 1411 aa12.69□□□□□ -0.38
CDCA3-201ENST00000229265 AOC2O75106 756 aa12.68□□□□□ -0.38
CDCA3-201ENST00000229265 ARID4AP29374 1257 aaPredicted RBP12.68□□□□□ -0.38
CDCA3-201ENST00000229265 CHRNDQ07001 517 aa12.68□□□□□ -0.38
CDCA3-201ENST00000229265 UBE3CQ15386 1083 aa12.68□□□□□ -0.38
CDCA3-201ENST00000229265 GRIK5Q16478 980 aa12.68□□□□□ -0.38
CDCA3-201ENST00000229265 PRAMEF18Q5VWM3 479 aa12.68□□□□□ -0.38
CDCA3-201ENST00000229265 BLOC1S2Q6QNY1 142 aa12.68□□□□□ -0.38
CDCA3-201ENST00000229265 USP48Q86UV5 1035 aa12.68□□□□□ -0.38
CDCA3-201ENST00000229265 RGS22Q8NE09 1264 aa12.68□□□□□ -0.38
CDCA3-201ENST00000229265 VPS33BQ9H267 617 aa12.68□□□□□ -0.38
CDCA3-201ENST00000229265 ANKIB1Q9P2G1 1089 aa12.68□□□□□ -0.38
CDCA3-201ENST00000229265 XDHP47989 1333 aa12.67□□□□□ -0.38
CDCA3-201ENST00000229265 A0A0D9SFI3 127 aa12.67□□□□□ -0.38
CDCA3-201ENST00000229265 TMEM88BA6NKF7 163 aa12.67□□□□□ -0.38
CDCA3-201ENST00000229265 FOXN1O15353 648 aa12.67□□□□□ -0.38
CDCA3-201ENST00000229265 SLC5A1P13866 664 aa12.67□□□□□ -0.38
CDCA3-201ENST00000229265 CASTP20810 708 aaKnown RBP12.67□□□□□ -0.38
CDCA3-201ENST00000229265 UBE4AQ14139 1066 aa12.67□□□□□ -0.38
CDCA3-201ENST00000229265 GRIPAP1Q4V328 841 aa12.67□□□□□ -0.38
CDCA3-201ENST00000229265 DACT2Q5SW24 774 aa12.67□□□□□ -0.38
CDCA3-201ENST00000229265 CYP4F22Q6NT55 531 aa12.67□□□□□ -0.38
CDCA3-201ENST00000229265 USP50Q70EL3 339 aaPredicted RBP12.67□□□□□ -0.38
CDCA3-201ENST00000229265 MOB2Q70IA6 237 aa12.67□□□□□ -0.38
CDCA3-201ENST00000229265 TMC4Q7Z404 712 aa12.67□□□□□ -0.38
CDCA3-201ENST00000229265 DNAJC2Q99543 621 aaKnown RBP12.67□□□□□ -0.38
CDCA3-201ENST00000229265 ATP6V1DQ9Y5K8 247 aa12.67□□□□□ -0.38
CDCA3-201ENST00000229265 WDR33Q9C0J8 1336 aaKnown RBP12.66□□□□□ -0.38
CDCA3-201ENST00000229265 GOLIM4O00461 696 aa12.66□□□□□ -0.38
CDCA3-201ENST00000229265 TRAK2O60296 914 aa12.66□□□□□ -0.38
CDCA3-201ENST00000229265 BRD1O95696 1058 aa12.66□□□□□ -0.38
CDCA3-201ENST00000229265 AK2P54819 239 aa12.66□□□□□ -0.38
CDCA3-201ENST00000229265 APPBP2Q92624 585 aa12.66□□□□□ -0.38
CDCA3-201ENST00000229265 JAKMIP1Q96N16 626 aaKnown RBP12.66□□□□□ -0.38
CDCA3-201ENST00000229265 NEK1Q96PY6 1258 aa12.66□□□□□ -0.38
CDCA3-201ENST00000229265 FZD1Q9UP38 647 aa12.66□□□□□ -0.38
CDCA3-201ENST00000229265 RPAP1Q9BWH6 1393 aaPredicted RBP12.66□□□□□ -0.38
CDCA3-201ENST00000229265 RASSF10A6NK89 507 aa12.65□□□□□ -0.38
CDCA3-201ENST00000229265 BAG4O95429 457 aaKnown RBP12.65□□□□□ -0.38
CDCA3-201ENST00000229265 PDCP20941 246 aa12.65□□□□□ -0.38
CDCA3-201ENST00000229265 RPS6KB1P23443 525 aa12.65□□□□□ -0.38
CDCA3-201ENST00000229265 LMOD1P29536 600 aaPredicted RBP12.65□□□□□ -0.38
CDCA3-201ENST00000229265 DEKP35659 375 aaKnown RBP12.65□□□□□ -0.38
CDCA3-201ENST00000229265 ZNF280AP59817 542 aaPredicted RBP12.65□□□□□ -0.38
CDCA3-201ENST00000229265 NBPF9Q3BBW0 867 aa12.65□□□□□ -0.38
CDCA3-201ENST00000229265 RSBN1LQ6PCB5 846 aaPredicted RBP12.65□□□□□ -0.38
CDCA3-201ENST00000229265 PNMA8AQ86V59 439 aaPredicted RBP12.65□□□□□ -0.38
CDCA3-201ENST00000229265 ZNF804BA4D1E1 1349 aa12.64□□□□□ -0.39
CDCA3-201ENST00000229265 SEMA3EO15041 775 aa12.64□□□□□ -0.39
CDCA3-201ENST00000229265 ATP2B4P23634 1241 aa12.64□□□□□ -0.39
CDCA3-201ENST00000229265 ALX1Q15699 326 aa12.64□□□□□ -0.39
CDCA3-201ENST00000229265 CCDC102BQ68D86 513 aa12.64□□□□□ -0.39
CDCA3-201ENST00000229265 DHX32Q7L7V1 743 aaKnown RBP12.64□□□□□ -0.39
CDCA3-201ENST00000229265 DPF2Q92785 391 aa12.64□□□□□ -0.39
CDCA3-201ENST00000229265 AGXT2Q9BYV1 514 aa12.64□□□□□ -0.39
CDCA3-201ENST00000229265 UPF3BQ9BZI7 483 aaKnown RBP12.64□□□□□ -0.39
CDCA3-201ENST00000229265 ZC3H12CQ9C0D7 883 aaKnown RBP12.64□□□□□ -0.39
CDCA3-201ENST00000229265 ANKRD2Q9GZV1 360 aa12.64□□□□□ -0.39
CDCA3-201ENST00000229265 GNL3LQ9NVN8 582 aaKnown RBP12.64□□□□□ -0.39
CDCA3-201ENST00000229265 TSKSQ9UJT2 592 aa12.64□□□□□ -0.39
CDCA3-201ENST00000229265 WDR19Q8NEZ3 1342 aa12.63□□□□□ -0.39
CDCA3-201ENST00000229265 CELF2O95319 508 aaKnown RBP12.63□□□□□ -0.39
CDCA3-201ENST00000229265 HSPD1P10809 573 aaKnown RBP12.63□□□□□ -0.39
CDCA3-201ENST00000229265 TNIP1Q15025 636 aa12.63□□□□□ -0.39
CDCA3-201ENST00000229265 KIF4BQ2VIQ3 1234 aa12.63□□□□□ -0.39
CDCA3-201ENST00000229265 ZNF589Q86UQ0 364 aaPredicted RBP12.63□□□□□ -0.39
CDCA3-201ENST00000229265 ZNF408Q9H9D4 720 aa12.63□□□□□ -0.39
CDCA3-201ENST00000229265 GGA3Q9NZ52 723 aa12.63□□□□□ -0.39
CDCA3-201ENST00000229265 COL1A1P02452 1464 aaPredicted RBP12.63□□□□□ -0.39
CDCA3-201ENST00000229265 SSC5DA1L4H1 1573 aa12.63□□□□□ -0.39
CDCA3-201ENST00000229265 GNAT2P19087 354 aa12.62□□□□□ -0.39
CDCA3-201ENST00000229265 NT5C2P49902 561 aa12.62□□□□□ -0.39
CDCA3-201ENST00000229265 EVCP57679 992 aa12.62□□□□□ -0.39
CDCA3-201ENST00000229265 MAP3K12Q12852 859 aa12.62□□□□□ -0.39
CDCA3-201ENST00000229265 KLHL40Q2TBA0 621 aa12.62□□□□□ -0.39
CDCA3-201ENST00000229265 ADCK5Q3MIX3 580 aa12.62□□□□□ -0.39
CDCA3-201ENST00000229265 L1TD1Q5T7N2 865 aaKnown RBP12.62□□□□□ -0.39
CDCA3-201ENST00000229265 SAPCD2Q86UD0 394 aa12.62□□□□□ -0.39
CDCA3-201ENST00000229265 CDAN1Q8IWY9 1227 aa12.62□□□□□ -0.39
CDCA3-201ENST00000229265 ZBED3Q96IU2 234 aaPredicted RBP12.62□□□□□ -0.39
CDCA3-201ENST00000229265 LLPHQ9BRT6 129 aaKnown RBP12.62□□□□□ -0.39
CDCA3-201ENST00000229265 MTA3Q9BTC8 594 aa12.62□□□□□ -0.39
CDCA3-201ENST00000229265 CD209Q9NNX6 404 aa12.62□□□□□ -0.39
CDCA3-201ENST00000229265 SMC3Q9UQE7 1217 aa12.62□□□□□ -0.39
CDCA3-201ENST00000229265 TLL2Q9Y6L7 1015 aa12.62□□□□□ -0.39
CDCA3-201ENST00000229265 PDS5AQ29RF7 1337 aaKnown RBP12.62□□□□□ -0.39
CDCA3-201ENST00000229265 AK9Q5TCS8 1911 aa12.61□□□□□ -0.39
CDCA3-201ENST00000229265 USP17L3A6NCW0 530 aa12.61□□□□□ -0.39
CDCA3-201ENST00000229265 USP17L4A6NCW7 530 aa12.61□□□□□ -0.39
CDCA3-201ENST00000229265 FAM155AB1AL88 458 aaPredicted RBP12.61□□□□□ -0.39
CDCA3-201ENST00000229265 CYP21A2P08686 494 aa12.61□□□□□ -0.39
CDCA3-201ENST00000229265 ADD2P35612 726 aa12.61□□□□□ -0.39
CDCA3-201ENST00000229265 ZAP70P43403 619 aa12.61□□□□□ -0.39
CDCA3-201ENST00000229265 GYG1P46976 350 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms